LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
lncRNA-FER1L4 miR-106a-5p CDKN1A CDKN1A;CAP20;CDKN1;CIP1;MDA-6;P21;SDI1;WAF1;P21cip1 details
ErbB signaling pathway; HIF-1 signaling pathway;Cell cycle; Melanoma;p53 signaling pathway;PI3K-Akt signaling pathway;Viral carcinogenesis;Hepatitis C;Hepatitis B;HTLV-I infection;Epstein-Barr virus infection;Chronic myeloid leukemia;Pathways in cancer;Proteoglycans in cancer;Transcriptional misregulation in cancer;Prostate cancer;Bladder cancer;Glioma
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
lncRNA-FER1L4 miR-106a-5p E2F1 E2F1;E2F-1;RBAP1;RBBP3;RBP3 details
Small cell lung cancer; HTLV-I infection;Cell cycle;Hepatitis B;Pathways in cancer;Pancreatic cancer;Glioma;Prostate cancer;Melanoma; Bladder cancer;Chronic myeloid leukemia;Non-small cell lung cancer
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
H19 miR-106a-5p E2F3 E2F3;E2F-3 details
Glioma;Cell cycle;Hepatitis B;HTLV-I infection;Pathways in cancer;Pancreatic cancer;Prostate cancer;Melanoma;Bladder cancer;Non-small cell lung cancer; Chronic myeloid leukemia;Small cell lung cancer
details
We found that lncRNA H19 was increased in melanoma tissue, and lncRNA H19 was correlated with poor prognosis of melanoma patients. miR-106a-5p acts as a tumour suppressor in melanoma by targeting E2F3
details
Long non-coding RNA H19 promotes glucose metabolism and cell growth in malignant melanoma via miR-106a-5p/E2F3 axis
Malignant melanoma J Cancer Res Clin Oncol 29350287
lncRNA-FER1L4 miR-106a-5p HIPK3 HIPK3;DYRK6;FIST3;PKY;YAK1 details
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
lncRNA-FER1L4 miR-106a-5p IL-10 IL10;CSIF;GVHDS;IL-10;IL10A;TGIF details
African trypanosomiasis;Cytokine-cytokine receptor interaction;Jak-STAT signaling pathway;T cell receptor signaling pathway;Tuberculosis;Epstein-Barr virus infection;Intestinal immune network for IgA production;Pertussis;Asthma;Allograft rejection;Leishmaniasis;Systemic lupus erythematosus;Chagas disease (American trypanosomiasis);Malaria;Toxoplasmosis;Staphylococcus aureus infection; Autoimmune thyroid disease;Amoebiasis
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
lncRNA-FER1L4 miR-106a-5p PAK7 PAK7;PAK5 details
ErbB signaling pathway;Axon guidance;Focal adhesion;T cell receptor signaling pathway;Regulation of actin cytoskeleton;Renal cell carcinoma
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
FER1L4 miR-106a-5p PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
details
Here, we report that the lncRNA FER1L4 (fer-1-like family member 4, pseudogene) acts as a competing endogenous RNA (ceRNA) to regulate the expression of PTEN (a well-known tumor suppressor gene) by taking up miR-106a-5p in gastric cancer.
details
Long noncoding RNA FER1L4 suppresses cancer cell growth by acting as a competing endogenous RNA and regulating PTEN expression
Cancer Cell Growth Sci Rep 26306906
lncRNA-FER1L4 miR-106a-5p PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
LINC00657 miR-106a-5p PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
details
We also found that LINC00657 could inhibit tumor growth in vivo. Further experiments demonstrated that down-regulated LINC00657 increased the expression of miR-106a-5p. miR-106a-5p decreased the abundances of PTEN protein, while had no impact on PTEN mRNA. Moreover, we identified that both LINC00657 and PTEN mRNA were targets of miR-106a-5p by using dual-luciferase reporter assay.
details
Long non-coding RNA 657 suppresses hepatocellular carcinoma cell growth by acting as a molecular sponge of miR-106a-5p to regulate PTEN expression.
Human hepatocellular carcinoma Int J Biochem Cell Biol. 28919047
lncRNA-FER1L4 miR-106a-5p RB1 RB1;OSRC;PPP1R130;RB;p105-Rb;pRb;pp110 details
Cell cycle;Hepatitis B;Small cell lung cancer;Chronic myeloid leukemia;HTLV-I infection;Epstein-Barr virus infection;Non-small cell lung cancer;Pathways in cancer;Viral carcinogenesis;Pancreatic cancer;Glioma;Prostate cancer;Melanoma;Bladder cancer
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
lncRNA-FER1L4 miR-106a-5p RUNX1 RUNX1;AML1;AML1-EVI-1;AMLCR1;CBF2alpha;CBFA2;EVI-1;PEBP2aB;PEBP2alpha details
Pathways in cancer;Transcriptional misregulation in cancer;Chronic myeloid leukemia;Acute myeloid leukemia
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853
lncRNA-FER1L4 miR-106a-5p VEGFA VEGFA;MVCD1;VEGF;VPF details
Renal cell carcinoma;Cytokine-cytokine receptor interaction;Rheumatoid arthritis;HIF-1 signaling pathway;mTOR signaling pathway;PI3K-Akt signaling pathway;VEGF signaling pathway;Focal adhesion;Pathways in cancer;Proteoglycans in cancer;Pancreatic cancer;Bladder cancer
details
For instance, through its miRNA response elements (MREs) to compete for miR-106a-5p, lncRNA-FER1L4 regulates the expression of PTEN, RB1, RUNX1, VEGFA, CDKN1A, E2F1, HIPK3, IL-10, and PAK7.
details
Long noncoding RNA associated-competing endogenous RNAs in gastric cancer PTENP1 Functions as a Competing Endogenous RNA (ceRNA) to Regulate PTEN Expression by Sponging miR-499-5p.
Gastric Cancer Sci Rep 25124853