LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
HOTAIR miR-454-3p ATG12 ATG12;APG12;APG12L;FBR93;HAPG12 details
Regulation of autophagy;RIG-I-like receptor signaling pathway
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Further analysis revealed that STAT3 and ATG12 are targets of miR-454-3p, initiate HOTAIR deficiency-induced apoptosis and reduce autophagy.
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Knockdown of long non-coding RNA HOTAIR increases miR-454-3p by targeting Stat3 and Atg12 to inhibit chondrosarcoma growth
Chondrosarcoma Cell Death Dis 28182000
HOTAIR miR-1 CCND1 CCND1;BCL1;D11S287E;PRAD1;U21B31 details
Cell cycle;p53 signaling pathway;Endometrial cancer;Melanoma;Thyroid cancer;PI3K-Akt signaling pathway;Pancreatic cancer;Wnt signaling pathway;Hippo signaling pathway;Prostate cancer;Acute myeloid leukemia;Focal adhesion;Viral myocarditis;Viral carcinogenesis;Colorectal cancer;Jak-STAT signaling pathway;Hepatitis B;Measles;Proteoglycans in cancer;Bladder cancer;Non-small cell lung cancer;HTLV-I infection;Small cell lung cancer;Pathways in cancer;Glioma;Chronic myeloid leukemia
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Furthermore, HOTAIR overturned the effect of miR-1 on the proliferation and cell cycle profile in ESCC cells, which involved the derepression of cyclin D1 (CCND1) expression, a target of miR-1.
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Long Noncoding RNA HOTAIR Controls Cell Cycle by Functioning as a Competing Endogenous RNA in Esophageal Squamous Cell Carcinoma
Esophageal Squamous Cell Carcinoma Transl Oncol 27816685
HOTAIR miR-1 FOXC1 FOXC1;ARA;FKHL7;FREAC-3;FREAC3;IGDA;IHG1;IRID1;RIEG3 details
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Taken together, these results suggest that HOTAIR is a FOXC1-activated driver of malignancy, which acts in part through the repression of miR-1.
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HOTAIR, a long non-coding RNA driver of malignancy whose expression is activated by FOXC1, negatively regulates miRNA-1 in hepatocellular carcinoma
Hepatocellular Carcinoma Oncol Lett 27895772
HOTAIR miR-331-3p HER2 ERBB2;CD340;HER-2;HER-2/neu;HER2;MLN 19;NEU;NGL;TKR1 details
Pathways in cancer;ErbB signaling pathway;Calcium signaling pathway;HIF-1 signaling pathway;Focal adhesion;Adherens junction;Proteoglycans in cancer;Non-small cell lung cancer;Pancreatic cancer;Endometrial cancer;Prostate cancer;Bladder cancer
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In particular, HOTAIR may act as a ceRNA, effectively becoming a sink for miR-331-3p, thereby modulating the derepression of HER2 and imposing an additional level of post-transcriptional regulation.
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Lnc RNA HOTAIR functions as a competing endogenous RNA to regulate HER2 expression by sponging miR-331-3p in gastric cancer
Gastric Cancer Mol Cancer 24775712
HOTAIR miR-148a HLA-G HLA-G;MHC-G details
Herpes simplex infection;Endocytosis; Phagosome;Cell adhesion molecules (CAMs);Antigen processing and presentation;Natural killer cell mediated cytotoxicity;Type I diabetes mellitus;HTLV-I infection;Graft-versus-host disease;Epstein-Barr virus infection; Viral myocarditis;Viral carcinogenesis;Autoimmune thyroid disease;Allograft rejection
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Moreover, HOTAIR modulated human leucocyte antigen-G (HLA-G) expression by competitively binding miR-148a.
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Long non-coding RNA HOTAIR modulates HLA-G expression by absorbing miR-148a in human cervical cancer
Cervical Cancer Int J Oncol 27574106
HOTAIR miR-126 PIK3R2 PIK3R2;MPPH;MPPH1;P85B;p85;p85-BETA details
B cell receptor signaling pathway;HIF-1 signaling pathway;ErbB signaling pathway;Chemokine signaling pathway;Melanoma;Pancreatic cancer;Jak-STAT signaling pathway;Chronic myeloid leukemia;Estrogen signaling pathway;Carbohydrate digestion and absorption;Leukocyte transendothelial migration;Phosphatidylinositol signaling system;Hepatitis C;Pathways in cancer;T cell receptor signaling pathway; Progesterone-mediated oocyte maturation;Chagas disease (American trypanosomiasis);Epstein-Barr virus infection;Bacterial invasion of epithelial cells;mTOR signaling pathway;PI3K-Akt signaling pathway;Apoptosis;Regulation of actin cytoskeleton;Non-small cell lung cancer;Insulin signaling pathway;Influenza A;Cholinergic synapse;Endometrial cancer;Aldosterone-regulated sodium reabsorption; Prostate cancer;Natural killer cell mediated cytotoxicity;Colorectal cancer;Amoebiasis;Viral carcinogenesis; Measles;VEGF signaling pathway;Fc gamma R-mediated phagocytosis;HTLV-I infection;Small cell lung cancer;Toxoplasmosis;Neurotrophin signaling pathway;Hepatitis B;Glioma;Type II diabetes mellitus;Fc epsilon RI signaling pathway;Renal cell carcinoma;Osteoclast differentiation;Focal adhesion;Acute myeloid leukemia;Proteoglycans in cancer;Toll-like receptor signaling pathway
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Furthermore, HOTAIR was shown to directly bind to and inhibit miR-126 expression and then to promote VEGFA and PIK3R2 expression and activate the PI3K/AKT/MRP1 pathway.
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LncRNA HOTAIR promotes cisplatin resistance in gastric cancer by targeting miR-126 to activate the PI3K/AKT/MRP1 genes
Gastric Cancer Tumour Biol 27900563
HOTAIR miR-126 PIK3R2 PIK3R2;MPPH;MPPH1;P85B;p85;p85-BETA details
Chemokine signaling pathway;ErbB signaling pathway;Endometrial cancer; Renal cell carcinoma;HIF-1 signaling pathway;Phosphatidylinositol signaling system;mTOR signaling pathway;Aldosterone-regulated sodium reabsorption;Pancreatic cancer; Colorectal cancer;Insulin signaling pathway;Pathways in cancer;Small cell lung cancer;PI3K-Akt signaling pathway;Apoptosis;Bacterial invasion of epithelial cells;VEGF signaling pathway;Progesterone-mediated oocyte maturation;Prostate cancer;Fc epsilon RI signaling pathway;Epstein-Barr virus infection;Osteoclast differentiation;Focal adhesion;Fc gamma R-mediated phagocytosis;Regulation of actin cytoskeleton;Viral carcinogenesis;Glioma;HTLV-I infection;Leukocyte transendothelial migration;
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Furthermore, HOTAIR was shown to directly bind to and inhibit miR-126 expression and then to promote VEGFA and PIK3R2 expression and activate the PI3K/AKT/MRP1 pathway.
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LncRNA HOTAIR promotes cisplatin resistance in gastric cancer by targeting miR-126 to activate the PI3K/AKT/MRP1 genes
Gastric Cancer Tumour Biol 27900563
HOTAIR miR-19 PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
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The further molecular mechanisms of HOTAIR action in CH demonstrated that HOTAIR may act as a competing endogenous RNA (ceRNA) for miR-19, thereby modulating the dis-inhibition of its endogenous target PTEN and playing an important role in inhibiting CH progress.
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HOTAIR functions as a competing endogenous RNA to regulate PTEN expression by inhibiting miR-19 in cardiac hypertrophy
Cardiac Hypertrophy Mol Cell Biochem 28316060
HOTAIR miR-373 Rab22a details
Endocytosis
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HOTAIR functioned as a ceRNA, and acted as a sink for microRNA (miR)?373, thereby regulating the expression of Rab22a.
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LncRNA HOTAIR controls the expression of Rab22a by sponging miR-373 in ovarian cancer
Ovarian Cancer Mol Med Rep 27484896
HOTAIR miR-141-3p SKA2 SKA2;FAM33A details
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Mechanistic investigations revealed that HOTAIR might act as an endogenous 'sponge' of miR-141, thereby regulating the derepression of SKA2.
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Epigenetic modification of miR-141 regulates SKA2 by an endogenous 'sponge' HOTAIR in glioma
Glioma Oncotarget 27121316
HOTAIR miR-148a Snail2 SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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Mechanistic investigations revealed lncRNA-HOTAIR promotes the EMT by acting as a miR-148a sponge to positively regulate Snail2 expression.
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Long non-coding RNA HOTAIR functions as miRNA sponge to promote the epithelial to mesenchymal transition in esophageal cancer.
Esophageal cancer Biomed Pharmacother 28441714
HOTAIR miR-34a Sox2 SOX2;ANOP3;MCOPS3 details
Hippo signaling pathway
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Moreover, full-length HOTAIR transcriptionally inhibits miR-34a specifically, leading to upregulation of Sox2, which is targeted by miR-34a.
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Long Non-Coding RNA HOTAIR Regulates the Proliferation, Self-Renewal Capacity, Tumor Formation and Migration of the Cancer Stem-Like Cell (CSC) Subpopulation Enriched from Breast Cancer Cells
Breast Cancer PLoS One 28122024
HOTAIR miR-326 SP1 details
TGF-beta signaling pathway; Estrogen signaling pathway;Huntington's disease;Transcriptional misregulation in cancer
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Furthermore, we show that the long noncoding RNA HOTAIR repression reverses chemoresistance of LAD cells partially through modulation of miR-326/SP1 pathway.
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miR-326 reverses chemoresistance in human lung adenocarcinoma cells by targeting specificity protein 1
Lung Adenocarcinoma Tumour Biol 27460077
HOTAIR miR-101-3p SRF SRF;MCM1 details
MAPK signaling pathway;HTLV-I infection;Viral carcinogenesis
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In addition, miR-101-3p could directly target and suppress the expression of the serum response factor (SRF) gene, which is a transcription factor of HOTAIR, a well-characterized tumor promoter lncRNA. miR-101-3p negatively regulated SRF-mediated transcription of HOTAIR.
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MiR-101-3p Suppresses HOX Transcript Antisense RNA (HOTAIR)-induced Proliferation and Invasion Through Directly Targeting SRF in Gastric Carcinoma Cells
Gastric Carcinoma Oncol Res 28251884
HOTAIR miR-101-3p SRF SRF;MCM1 details
MAPK signaling pathway;HTLV-I infection;Viral carcinogenesis
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In addition, miR-101-3p could directly target and suppress the expression of the serum response factor (SRF) gene, which is a transcription factor of HOTAIR, a well-characterized tumor promoter lncRNA.
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MiR-101-3p Suppresses HOX Transcript Antisense RNA (HOTAIR)-induced Proliferation and Invasion Through Directly Targeting SRF in Gastric Carcinoma Cells
Gastric Carcinoma Oncol Res 28251884
HOTAIR miR-454-3p STAT3 STAT3;ADMIO;APRF;HIES details
Hepatitis B;Chemokine signaling pathway;HIF-1 signaling pathway;Jak-STAT signaling pathway;Adipocytokine signaling pathway; Toxoplasmosis;Proteoglycans in cancer;Hepatitis C; Measles;Epstein-Barr virus infection;Pathways in cancer;Acute myeloid leukemia;Pancreatic cancer;Viral carcinogenesis
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Further analysis revealed that STAT3 and ATG12 are targets of miR-454-3p, initiate HOTAIR deficiency-induced apoptosis and reduce autophagy.
details
Knockdown of long non-coding RNA HOTAIR increases miR-454-3p by targeting Stat3 and Atg12 to inhibit chondrosarcoma growth
Chondrosarcoma Cell Death Dis 28182000
HOTAIR miR-126 VEGFA VEGFA;MVCD1;VEGF;VPF details
HIF-1 signaling pathway;Cytokine-cytokine receptor interaction;mTOR signaling pathway;PI3K-Akt signaling pathway; VEGF signaling pathway;Focal adhesion; Pathways in cancer;Proteoglycans in cancer;Renal cell carcinoma;Pancreatic cancer;Bladder cancer;Rheumatoid arthritis
details
Furthermore, HOTAIR was shown to directly bind to and inhibit miR-126 expression and then to promote VEGFA and PIK3R2 expression and activate the PI3K/AKT/MRP1 pathway.
details
LncRNA HOTAIR promotes cisplatin resistance in gastric cancer by targeting miR-126 to activate the PI3K/AKT/MRP1 genes
Gastric Cancer Tumour Biol 27900563
HOTAIR miR-126 VEGFA VEGFA;MVCD1;VEGF;VPF details
mTOR signaling pathway;Cytokine-cytokine receptor interaction;HIF-1 signaling pathway;PI3K-Akt signaling pathway;VEGF signaling pathway;Focal adhesion;Pathways in cancer;Proteoglycans in cancer;Renal cell carcinoma;Rheumatoid arthritis;Pancreatic cancer;Bladder cancer
details
Furthermore, HOTAIR was shown to directly bind to and inhibit miR-126 expression and then to promote VEGFA and PIK3R2 expression and activate the PI3K/AKT/MRP1 pathway.
details
LncRNA HOTAIR promotes cisplatin resistance in gastric cancer by targeting miR-126 to activate the PI3K/AKT/MRP1 genes
Gastric Cancer Tumour Biol 27900563