LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
HULC miR-200a BCL2 BCL2;Bcl-2;PPP1R50 details
HIF-1 signaling pathway;NF-kappa B signaling pathway;Protein processing in endoplasmic reticulum;Pathways in cancer;Small cell lung cancer;Prostate cancer;PI3K-Akt signaling pathway;Apoptosis;Focal adhesion; Neurotrophin signaling pathway;Cholinergic synapse;Amyotrophic lateral sclerosis (ALS);Colorectal cancer;Hepatitis B;Epstein-Barr virus infection; Toxoplasmosis;Tuberculosis
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Furthermore, HULC could modulate c-Myc and Bcl-2 by miR-200a as an endogenous sponge.
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Long noncoding RNA HULC promotes cell proliferation by regulating PI3K/AKT signaling pathway in chronic myeloid leukemia
Chronic Myeloid Leukemia Gene 28069548
HULC miR-200a c-Myc MYC;MRTL;MYCC;bHLHe39;c-Myc details
Hepatitis B;MAPK signaling pathway;ErbB signaling pathway;Cell cycle;PI3K-Akt signaling pathway;Transcriptional misregulation in cancer;Bladder cancer;Wnt signaling pathway;Colorectal cancer;Endometrial cancer;Acute myeloid leukemia;TGF-beta signaling pathway;Hippo signaling pathway;Small cell lung cancer;Proteoglycans in cancer;Thyroid cancer;Jak-STAT signaling pathway;Pathways in cancer;HTLV-I infection;Chronic myeloid leukemia;Epstein-Barr virus infection
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Furthermore, HULC could modulate c-Myc and Bcl-2 by miR-200a as an endogenous sponge.
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Long noncoding RNA HULC promotes cell proliferation by regulating PI3K/AKT signaling pathway in chronic myeloid leukemia
Chronic Myeloid Leukemia Gene 28069548
TP73-AS1 miR-200a HMGB1 HMGB1;HMG1;HMG3;SBP-1 details
Base excision repair
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By using luciferase assays, we confirmed that miR-200a could directly bind to TP73-AS1 and the 3'UTR of HMGB1; TP73-AS1 competed with HMGB1 for miR-200a binding. MiR-200a inhibition could up-regulate HMGB1, RAGE, NF-κB expression as well as NF-κB regulated cytokines levels, which could be partially restored by si-TP73-AS1.
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The long non-coding RNA TP73-AS1 modulates HCC cell proliferation through miR-200a-dependent HMGB1/RAGE regulation
Hepatocellular Carcinoma J Exp Clin Cancer Res 28403886
TP73-AS1 miR-200a RAGE AGER;RAGE details
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By using luciferase assays, we confirmed that miR-200a could directly bind to TP73-AS1 and the 3'UTR of HMGB1; TP73-AS1 competed with HMGB1 for miR-200a binding. MiR-200a inhibition could up-regulate HMGB1, RAGE, NF-κB expression as well as NF-κB regulated cytokines levels, which could be partially restored by si-TP73-AS1.
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The long non-coding RNA TP73-AS1 modulates HCC cell proliferation through miR-200a-dependent HMGB1/RAGE regulation
Hepatocellular Carcinoma J Exp Clin Cancer Res 28403886
H19 miR-200a ZEB1 ZEB1;AREB6;BZP;DELTAEF1;FECD6;NIL2A;PPCD3;TCF8;ZFHEP;ZFHX1A details
Transcriptional misregulation in cancer
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Furthermore, we showed that H19 promotes metastasis through upregulation of ZEB1 and ZEB2 by competitively binding the miR-200 family.
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H19 Functions as a ceRNA in Promoting Metastasis Through Decreasing miR-200s Activity in Osteosarcoma
Osteosarcoma DNA Cell Biol 27008415
H19 miR-200a ZEB1 ZEB1;AREB6;BZP;DELTAEF1;FECD6;NIL2A;PPCD3;TCF8;ZFHEP;ZFHX1A details
Transcriptional misregulation in cancer
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Furthermore, by using bioinformatics study and RNA immunoprecipitation combined with luciferase reporter assays, we demonstrated that H19 functioned as a competing endogenous RNA (ceRNA) for miR-138 and miR-200a, antagonized their functions and led to the de-repression of their endogenous targets Vimentin, ZEB1, and ZEB2, all of which were core marker genes for mesenchymal cells.
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The lncRNA H19 promotes epithelial to mesenchymal transition by functioning as miRNA sponges in colorectal cancer
Colorectal Cancer Oncotarget 26068968
H19 miR-200a ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
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Furthermore, we showed that H19 promotes metastasis through upregulation of ZEB1 and ZEB2 by competitively binding the miR-200 family.
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H19 Functions as a ceRNA in Promoting Metastasis Through Decreasing miR-200s Activity in Osteosarcoma
Osteosarcoma DNA Cell Biol 27008415
H19 miR-200a ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
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Furthermore, by using bioinformatics study and RNA immunoprecipitation combined with luciferase reporter assays, we demonstrated that H19 functioned as a competing endogenous RNA (ceRNA) for miR-138 and miR-200a, antagonized their functions and led to the de-repression of their endogenous targets Vimentin, ZEB1, and ZEB2, all of which were core marker genes for mesenchymal cells.
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The lncRNA H19 promotes epithelial to mesenchymal transition by functioning as miRNA sponges in colorectal cancer
Colorectal Cancer Oncotarget 26068968
MALAT1 miR-200a ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
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We further demonstrated MALAT1 promote KIRC proliferation and metastasis through sponging miR-200s in vitro and in vivo. In addition, miR-200c can partly reverse the MALAT1's stimulation on proliferation and metastasis in KIRC. In summary we unveil a branch of the MALAT1/miR-200s/ZEB2 pathway that regulates the progression of KIRC.
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LncRNA MALAT1 functions as a competing endogenous RNA to regulate ZEB2 expression by sponging miR-200s in clear cell kidney carcinoma
Kidney Carcinoma Oncotarget 26461224