LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
UCA1 miR-507 FOXM1 FOXM1;FKHL16;FOXM1B;HFH-11;HFH11;HNF-3;INS-1;MPHOSPH2;MPP-2;MPP2;PIG29;TGT3;TRIDENT details
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We found that miR-507 could directly bind to UCA1 at the miRNA recognition site, and that there was a negative correlation between miR-507 and UCA1. Additionally, FOXM1 is a target of miR-507 and can be downregulated by either miR-507 overexpression or UCA1 depletion.
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LncRNA UCA1-miR-507-FOXM1 axis is involved in cell proliferation, invasion and G0/G1 cell cycle arrest in melanoma
Melanoma Med Oncol 27389544
MHENCR miR-425 IGF1 IGF1;IGF-I;IGF1A;IGFI details
mTOR signaling pathway;HIF-1 signaling pathway;Hypertrophic cardiomyopathy (HCM);Glioma;Prostate cancer;Oocyte meiosis;p53 signaling pathway;PI3K-Akt signaling pathway;Proteoglycans in cancer;Melanoma;Focal adhesion;Long-term depression;Transcriptional misregulation in cancer;Ovarian steroidogenesis;Progesterone-mediated oocyte maturation;Aldosterone-regulated sodium reabsorption;Pathways in cancer;Dilated cardiomyopathy
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Furthermore, we identified MHENCR as a competitively endogenous RNA, which specifically bound to miR-425 and miR-489, upregulated their target genes IGF1 and SPIN1 expression, and further activated PI3K-Akt pathway.
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Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway
Melanoma Am J Transl Res 28123636
MALAT1 miR-183 ITGB1 ITGB1;CD29;FNRB;GPIIA;MDF2;MSK12;VLA-BETA;VLAB details
Axon guidance;Phagosome;PI3K-Akt signaling pathway;Focal adhesion;ECM-receptor interaction;Toxoplasmosis;Cell adhesion molecules (CAMs);Leukocyte transendothelial migration;Regulation of actin cytoskeleton;Hypertrophic cardiomyopathy (HCM);Dilated cardiomyopathy;Proteoglycans in cancer;Arrhythmogenic right ventricular cardiomyopathy (ARVC);Bacterial invasion of epithelial cells;Leishmaniasis;Pathogenic Escherichia coli infection;Pertussis;Pathways in cancer;Small cell lung cancer;Shigellosis
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We further found that the expression and function of miR-183 were suppressed by MALAT1. Integrin β1 (ITGB1) was then speculated and confirmed as a direct target of miR-183. We also illustrated that MALAT1 may function as a sponge competitive endogenous RNA (ceRNA) for miR-183, and thus regulate the molecular expression of ITGB1.
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Deregulation of miR-183 promotes melanoma development via lncRNA MALAT1 regulation and ITGB1 signal activation
Melanoma Oncotarget 27966454
MHENCR miR-489 SPIN1 SPIN1;SPIN details
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Furthermore, we identified MHENCR as a competitively endogenous RNA, which specifically bound to miR-425 and miR-489, upregulated their target genes IGF1 and SPIN1 expression, and further activated PI3K-Akt pathway.
details
Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway
Melanoma Am J Transl Res 28123636