LncCeRBase

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LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
Malat1 miR-101 ATG4D ATG4D;APG4-D;APG4D;AUTL4 details
Regulation of autophagy
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We further investigated the molecular mechanisms whereby Malat1 functioned on glioma cell autophagy and proliferation. We found that Malat1 served as an endogenous sponge to reduce miR-101 expression by directly binding to miR-101. Moreover, Malat1 abolished the suppression effects of miR-101 on glioma cell autophagy and proliferation, which involved in upregulating the expression of miR-101 targets STMN1, RAB5A and ATG4D.
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Malat1 activates autophagy and promotes cell proliferation by sponging miR-101 and upregulating STMN1, RAB5A and ATG4D expression in glioma.
Glioma Biochem Biophys Res Commun 28834690
PVT1 miR-186 Atg7 ATG7;APG7-LIKE;APG7L;GSA7 details
Regulation of autophagy
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In conclusion, PVT1 overexpression increased the expression of Atg7 and Beclin1 by targeting miR-186, which induced protective autophagy, thus promoting glioma vascular endothelial cell proliferation, migration, and angiogenesis.
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PVT1 affects growth of glioma microvascular endothelial cells by negatively regulating miR-186
Glioma Tumour Biol 28351322
NEAT1 miR-449b-5p BCL2 BCL2;Bcl-2;PPP1R50 details
HIF-1 signaling pathway;NF-kappa B signaling pathway;Protein processing in endoplasmic reticulum;Pathways in cancer;Small cell lung cancer;Prostate cancer;PI3K-Akt signaling pathway;Apoptosis;Focal adhesion; Neurotrophin signaling pathway;Cholinergic synapse;Amyotrophic lateral sclerosis (ALS);Colorectal cancer;Hepatitis B;Epstein-Barr virus infection; Toxoplasmosis;Tuberculosis
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Furthermore, we verified that c-Met was a directly target of miR-449b-5p. Rescue assays demonstrated NEAT1 functions a molecular sponge for miR-449b-5p and leads to the upregulation of c-Met.
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Long noncoding RNA NEAT1 promotes glioma pathogenesis by regulating miR-449b-5p/c-Met axis
Glioma Tumour Biol 26242266
PVT1 miR-186 Beclin1 BECN1;ATG6;VPS30;beclin1 details
Regulation of autophagy
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In conclusion, PVT1 overexpression increased the expression of Atg7 and Beclin1 by targeting miR-186, which induced protective autophagy, thus promoting glioma vascular endothelial cell proliferation, migration, and angiogenesis.
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PVT1 affects growth of glioma microvascular endothelial cells by negatively regulating miR-186
Glioma Tumour Biol 28351322
KCNQ1OT1 miR-370 CCNE2 CCNE2;CYCE2 details
Cell cycle; Oocyte meiosis;p53 signaling pathway;PI3K-Akt signaling pathway;Hepatitis B;Measles;Pathways in cancer;Viral carcinogenesis;Prostate cancer;Small cell lung cancer
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Knockdown of KCNQ1OT1 decreased the expression level of Cyclin E2 (CCNE2) by binding to miR-370. Further, miR-370 bound to CCNE2 3'UTR region and decreased the expression of CCNE2. These results provided a comprehensive analysis of KCNQ1OT1-miR-370-CCNE2 axis in human glioma cells and might provide a novel strategy for glioma treatment.
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Knockdown of Long Non-Coding RNA KCNQ1OT1 Restrained Glioma Cells' Malignancy by Activating miR-370/CCNE2 Axis
Glioma Front Cell Neurosci 28381990
MALAT1 miR-155 FBXW7 FBXW7;AGO;CDC4;FBW6;FBW7;FBX30;FBXO30;FBXW6;SEL-10;SEL10;hAgo;hCdc4 details
Ubiquitin mediated proteolysis
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Further, MALAT1 suppresses cell viability by down-regulating miR-155. FBXW7 mRNA was identified as a direct target of miR-155 in glioma. The miR-155-induced tumorigenesis is mediated through FBXW7 function. Finally, we found that MALAT1 positively regulated FBXW7 expression, which was responsible for glioma progression mediated by MALAT1-miR-155 pathway.
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Tumor-suppressive function of long noncoding RNA MALAT1 in glioma cells by suppressing miR-155 expression and activating FBXW7 function
Glioma Am J Cancer Res 27904771
XIST miR-137 FOXC1 FOXC1;ARA;FKHL7;FREAC-3;FREAC3;IGDA;IHG1;IRID1;RIEG3 details
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The analysis of the mechanism of action revealed that the reduction of XIST inhibited the expression of the transcription factor forkhead box C1 (FOXC1) and zonula occludens 2 (ZO-2) by upregulating miR-137.
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Knockdown of long non-coding RNA XIST increases blood-tumor barrier permeability and inhibits glioma angiogenesis by targeting miR-137
Glioma Oncogenesis 28287613
circ-TTBK2 miR-217 HNF1beta HNF1B;FJHN;HNF-1-beta;HNF-1B;HNF1beta;HNF2;HPC11;LF-B3;LFB3;MODY5;TCF-2;TCF2;VHNF1 details
Maturity onset diabetes of the young
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We also found that circ-TTBK2, but not linear TTBK2, acted as miR-217 sponge in a sequence-specific manner. In addition, upregulated circ-TTBK2 decreased miR-217 expression and there was a reciprocal negative feedback between them in an Argonaute2-dependent manner. Moreover, reintroduction of miR-217 significantly reversed circ-TTBK2-mediated promotion of glioma progression. HNF1β was a direct target of miR-217, and played oncogenic role in glioma cells.
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TTBK2 circular RNA promotes glioma malignancy by regulating miR-217/HNF1β/Derlin-1 pathway
Glioma J Hematol Oncol 28219405
H19 miR-140 iASPP PPP1R13L;IASPP;NKIP1;RAI;RAI4 details
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In addition, miR-140 dependent inhibitor of apoptosis-stimulating protein of p53 (iASPP) regulation was required in H19 induced glioma cell growth.
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The lncRNA H19 interacts with miR-140 to modulate glioma growth by targeting iASPP
Glioma Arch Biochem Biophys 27693036
UCA1 miR-182 iASPP PPP1R13L;IASPP;NKIP1;RAI;RAI4 details
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Taken together, UCA1 might promote proliferation and migration of glioma, to regulate the tumor growth and metastasis via miR-182 dependent iASPP regulation.
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The lncRNA UCA1 interacts with miR-182 to modulate glioma proliferation and migration by targeting iASPP
Glioma Arch Biochem Biophys 28137422
CRNDE miR-384 PIWIL4 PIWIL4;HIWI2;MIWI2 details
Hepatitis B;Chemokine signaling pathway;HIF-1 signaling pathway;Jak-STAT signaling pathway;Adipocytokine signaling pathway; Toxoplasmosis;Proteoglycans in cancer;Hepatitis C; Measles;Epstein-Barr virus infection;Pathways in cancer;Acute myeloid leukemia;Pancreatic cancer;Viral carcinogenesis
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At the molecular level, treatment by CRNDE knockdown or miR-384 overexpression resulted in a decrease of piwi-like RNA-mediated gene silencing 4 (PIWIL4) protein.
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CRNDE Promotes Malignant Progression of Glioma by Attenuating miR-384/PIWIL4/STAT3 Axis
Glioma Mol Ther 27058823
CASC2 miR-181a PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
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CASC2 up-regulated PTEN protein and down-regulated p-AKT protein through regulating miR-181a, and the effect of CASC2 on PTEN and p-AKT could be partially restored by miR-181a. With TMZ-resistant glioma tissues, miR-181a was up-regulated while PTEN was down-regulated.
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LncRNA CASC2 Interacts With miR-181a to Modulate Glioma Growth and Resistance to TMZ Through PTEN Pathway
Glioma J Cell Biochem 28121023
MEG3 miR-19a PTEN PTEN;10q23del;BZS;CWS1;DEC;GLM2;MHAM;MMAC1;PTEN1;TEP1 details
p53 signaling pathway;Inositol phosphate metabolism;Prostate cancer;Phosphatidylinositol signaling system;mTOR signaling pathway;PI3K-Akt signaling pathway;Focal adhesion;Tight junction;Hepatitis B;Pathways in cancer;Melanoma;Endometrial cancer;Glioma;Small cell lung cancer
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As expected, luciferase results verified the putative target site and also revealed the complementary binding between miR-19a and MEG3. miR-19a represses the expression of PTEN and promotes glioma cell proliferation, migration, and invasion
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Long Noncoding RNA MEG3 Suppresses Glioma Cell Proliferation, Migration, and Invasion By Acting As Competing Endogenous RNA of MiR-19a
Glioma Oncol Res 28276316
Malat1 miR-101 RAB5A RAB5A;RAB5 details
Endocytosis;Phagosome;Vasopressin-regulated water reabsorption;Amyotrophic lateral sclerosis (ALS);Amoebiasis;Tuberculosis
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We further investigated the molecular mechanisms whereby Malat1 functioned on glioma cell autophagy and proliferation. We found that Malat1 served as an endogenous sponge to reduce miR-101 expression by directly binding to miR-101. Moreover, Malat1 abolished the suppression effects of miR-101 on glioma cell autophagy and proliferation, which involved in upregulating the expression of miR-101 targets STMN1, RAB5A and ATG4D.
details
Malat1 activates autophagy and promotes cell proliferation by sponging miR-101 and upregulating STMN1, RAB5A and ATG4D expression in glioma.
Glioma Biochem Biophys Res Commun 28834690
HOTAIR miR-141-3p SKA2 SKA2;FAM33A details
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Mechanistic investigations revealed that HOTAIR might act as an endogenous 'sponge' of miR-141, thereby regulating the derepression of SKA2.
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Epigenetic modification of miR-141 regulates SKA2 by an endogenous 'sponge' HOTAIR in glioma
Glioma Oncotarget 27121316
Malat1 miR-101 STMN1 STMN1;C1orf215;LAP18;Lag;OP18;PP17;PP19;PR22;SMN details
MAPK signaling pathway
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We further investigated the molecular mechanisms whereby Malat1 functioned on glioma cell autophagy and proliferation. We found that Malat1 served as an endogenous sponge to reduce miR-101 expression by directly binding to miR-101. Moreover, Malat1 abolished the suppression effects of miR-101 on glioma cell autophagy and proliferation, which involved in upregulating the expression of miR-101 targets STMN1, RAB5A and ATG4D.
details
Malat1 activates autophagy and promotes cell proliferation by sponging miR-101 and upregulating STMN1, RAB5A and ATG4D expression in glioma.
Glioma Biochem Biophys Res Commun 28834690
ATB miR-200 TGD-beta2 TGFB2;:LDS4;TGF-beta2 details
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In particular, ATB may act as a ceRNA, effectively becoming a sink for miR-200a, thereby modulating the derepression of TGF-β2.
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Long non-coding RNA ATB promotes glioma malignancy by negatively regulating miR-200a
Glioma J Exp Clin Cancer Res 27267902
ECONEXIN miR-411-5p TOP2A TOP2A;TOP2;TP2A details
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Inhibition of ECONEXIN upregulated miR-411-5p together with the downregulation of its target, Topoisomerase 2 alpha (TOP2A), in glioma cell lines, resulting in decreased cell proliferation. Our data demonstrated that ECONEXIN is a potential oncogene that regulates TOP2A by sponging miR-411-5p in glioma.
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Oncogenic effects of evolutionarily conserved noncoding RNA ECONEXIN on gliomagenesis
Glioma Oncogene 28368417
H19 miR-29a VASH2 details
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Knockdown of H19 also decreased the VASH2 expression by up-regulating miR-29a.
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Long non-coding RNA H19 regulates glioma angiogenesis and the biological behavior of glioma-associated endothelial cells by inhibiting microRNA-29a
Glioma Cancer Lett 27543358
H19 miR-29a VASH2 details
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Knockdown of H19 also decreased the VASH2 expression by up-regulating miR-29a.
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Long non-coding RNA H19 regulates glioma angiogenesis and the biological behavior of glioma-associated endothelial cells by inhibiting microRNA-29a
Glioma Cancer Lett 27543358
XIST miR-137 ZO-2 TJP2;C9DUPq21.11;DFNA51;DUP9q21.11;PFIC4;X104;ZO2 details
Tight junction;Vibrio cholerae infection
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The analysis of the mechanism of action revealed that the reduction of XIST inhibited the expression of the transcription factor forkhead box C1 (FOXC1) and zonula occludens 2 (ZO-2) by upregulating miR-137.
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Knockdown of long non-coding RNA XIST increases blood-tumor barrier permeability and inhibits glioma angiogenesis by targeting miR-137
Glioma Oncogenesis 28287613