LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
HOTAIR miR-1 CCND1 CCND1;BCL1;D11S287E;PRAD1;U21B31 details
Cell cycle;p53 signaling pathway;Endometrial cancer;Melanoma;Thyroid cancer;PI3K-Akt signaling pathway;Pancreatic cancer;Wnt signaling pathway;Hippo signaling pathway;Prostate cancer;Acute myeloid leukemia;Focal adhesion;Viral myocarditis;Viral carcinogenesis;Colorectal cancer;Jak-STAT signaling pathway;Hepatitis B;Measles;Proteoglycans in cancer;Bladder cancer;Non-small cell lung cancer;HTLV-I infection;Small cell lung cancer;Pathways in cancer;Glioma;Chronic myeloid leukemia
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Furthermore, HOTAIR overturned the effect of miR-1 on the proliferation and cell cycle profile in ESCC cells, which involved the derepression of cyclin D1 (CCND1) expression, a target of miR-1.
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Long Noncoding RNA HOTAIR Controls Cell Cycle by Functioning as a Competing Endogenous RNA in Esophageal Squamous Cell Carcinoma
Esophageal Squamous Cell Carcinoma Transl Oncol 27816685
MALAT1 miR-1 cdc42 CDC42;CDC42Hs;G25K details
Chemokine signaling pathway;MAPK signaling pathway;Endocytosis;Axon guidance;Epithelial cell signaling in Helicobacter pylori infection;Viral carcinogenesis;Neurotrophin signaling pathway;Bacterial invasion of epithelial cells;Renal cell carcinoma;Shigellosis;Salmonella infection;Pancreatic cancer;VEGF signaling pathway;Focal adhesion;Pathways in cancer;Pathogenic Escherichia coli infection;Adherens junction;Tight junction;GnRH signaling pathway;Regulation of actin cytoskeleton;T cell receptor signaling pathway;Fc gamma R-mediated phagocytosis;Leukocyte transendothelial migration;Proteoglycans in cancer
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In this study we identified long non-coding RNA (lncRNA) MALAT1 can function as a ceRNA of cell division cycle 42 (cdc42) 3'UTR in inducing migration and invasion of breast cancer cells via miR-1. We found that miR-1 bound both MALAT1 and cdc42 3'UTR directly.
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MALAT1 induced migration and invasion of human breast cancer cells by competitively binding miR-1 with cdc42
Breast Cancer Biochem Biophys Res Commun 26926567
HOTAIR miR-1 FOXC1 FOXC1;ARA;FKHL7;FREAC-3;FREAC3;IGDA;IHG1;IRID1;RIEG3 details
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Taken together, these results suggest that HOTAIR is a FOXC1-activated driver of malignancy, which acts in part through the repression of miR-1.
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HOTAIR, a long non-coding RNA driver of malignancy whose expression is activated by FOXC1, negatively regulates miRNA-1 in hepatocellular carcinoma
Hepatocellular Carcinoma Oncol Lett 27895772
MALAT1 miR-1 slug SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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In addition, our findings demonstrate a reciprocal negative control relationship between MALAT1 and miR-1: downregulation of MALAT1 increased expression of microRNA-1 (miR-1), while overexpression of miR-1 decreased MALAT1 expression. Slug was identified as a direct target of miR-1. We proposed that MALAT1 exerted its function through the miR-1/slug axis.
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Reciprocal regulation of Hsa-miR-1 and long noncoding RNA MALAT1 promotes triple-negative breast cancer development
Breast Cancer Tumour Biol 26676637
MALAT1 miR-1 slug SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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Furthermore, we found that there was reciprocal repression between MALAT1 and miR-1, and slug was identified as a downstream target of miR-1.
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The role of MALAT1/miR-1/slug axis on radioresistance in nasopharyngeal carcinoma
Nasopharyngeal Carcinoma Tumour Biol 26482776