LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
MALAT1 miR-22-3p AKT AKT2;HIHGHH;PKBB;PKBBETA;PRKBB;RAC-BETA details
Cholinergic synapse;HIF-1 signaling pathway;Chemokine signaling pathway;MAPK signaling pathway;Small cell lung cancer;Toll-like receptor signaling pathway;Fc epsilon RI signaling pathway;T cell receptor signaling pathway;ErbB signaling pathway;Carbohydrate digestion and absorption;Chagas disease (American trypanosomiasis);mTOR signaling pathway;PI3K-Akt signaling pathway;Hepatitis B;HTLV-I infection;Pathways in cancer;Toxoplasmosis;Colorectal cancer;Endometrial cancer;Jak-STAT signaling pathway;Neurotrophin signaling pathway;Influenza A;Proteoglycans in cancer; Measles;Dopaminergic synapse;Tuberculosis;Prostate cancer;Non-small cell lung cancer;Apoptosis;Progesterone-mediated oocyte maturation;Melanoma;Chronic myeloid leukemia; B cell receptor signaling pathway; Insulin signaling pathway;Renal cell carcinoma;Estrogen signaling pathway;VEGF signaling pathway;Osteoclast differentiation;Glioma;Epstein-Barr virus infection; Focal adhesion;Tight junction;Hepatitis C;Fc gamma R-mediated phagocytosis;Pancreatic cancer;Acute myeloid leukemia;Adipocytokine signaling pathway
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MALAT1 silencing significantly downregulated the expression of the miR-22-3p target gene CXCR2 via reversing the effect of the miR-22-3p, resulting in the aggravation of Oxidized low-density lipoprotein (ox-LDL)-induced endothelial injury; this process was associated with the AKT pathway.
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The lncRNA MALAT1 protects the endothelium against ox-LDL-induced dysfunction via upregulating the expression of the miR-22-3p target genes CXCR2 and AKT
Kidney Carcinoma FEBS Lett 26364720
MALAT1 miR-206 ANXA2 ANXA2;ANX2;ANX2L4;CAL1H;HEL-S-270;LIP2;LPC2;LPC2D;P36;PAP-IV details
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We also show that Malat1 functions as a competing endogenous RNA (ceRNA) for miR-206. Because miR-206 directly suppresses expression of ANXA2 and KRAS, which are thought to promote GBC progression, Malat1 binding of miR-206 in GBC tissue and cells has an oncogenic effect. Conversely, Malat1 knockdown inhibits proliferation and invasion by GBC cells while increasing apoptosis.
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Long non-coding RNA Malat1 promotes gallbladder cancer development by acting as a molecular sponge to regulate miR-206
Gallbladder Cancer Oncotarget 27191262
MALAT1 miR-30a Beclin1 BECN1;ATG6;VPS30;beclin1 details
Regulation of autophagy
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Furthermore, MALAT1 may serve as a molecular sponge for miR-30a and negatively regulate its expression. In addition, MALAT1 overturned the inhibitory effect of miR-30a on ischemic injury and autophagy in vitro and in vivo, which might be involved in the derepression of Beclin1, a direct target of miR-30a.
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Down-Regulation of Lncrna MALAT1 Attenuates Neuronal Cell Death Through Suppressing Beclin1-Dependent Autophagy by Regulating Mir-30a in Cerebral Ischemic Stroke.
Cerebral Ischemic Stroke Cell Physiol Biochem. 28854438
MALAT1 miR-145 Bnip3 BNIP3;NIP3 details
Legionellosis
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In summary, lncRNA-MALAT1 is sensitive to H/R injury and abrogates cardioprotective effects of Fentanyl by negatively regulating miR-145/Bnip3 pathway.
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Long non-coding RNA MALAT1 functions as a mediator in cardioprotective effects of fentanyl in myocardial ischemia-reperfusion injury
Myocardial Ischemia-Reperfusion (I/R) Injury Cell Biol Int 27862640
MALAT1 miR-1 cdc42 CDC42;CDC42Hs;G25K details
Chemokine signaling pathway;MAPK signaling pathway;Endocytosis;Axon guidance;Epithelial cell signaling in Helicobacter pylori infection;Viral carcinogenesis;Neurotrophin signaling pathway;Bacterial invasion of epithelial cells;Renal cell carcinoma;Shigellosis;Salmonella infection;Pancreatic cancer;VEGF signaling pathway;Focal adhesion;Pathways in cancer;Pathogenic Escherichia coli infection;Adherens junction;Tight junction;GnRH signaling pathway;Regulation of actin cytoskeleton;T cell receptor signaling pathway;Fc gamma R-mediated phagocytosis;Leukocyte transendothelial migration;Proteoglycans in cancer
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In this study we identified long non-coding RNA (lncRNA) MALAT1 can function as a ceRNA of cell division cycle 42 (cdc42) 3'UTR in inducing migration and invasion of breast cancer cells via miR-1. We found that miR-1 bound both MALAT1 and cdc42 3'UTR directly.
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MALAT1 induced migration and invasion of human breast cancer cells by competitively binding miR-1 with cdc42
Breast Cancer Biochem Biophys Res Commun 26926567
MALAT1 miR-124 CDK4 CDK4;CMM3;PSK-J3 details
Tight junction;Cell cycle;p53 signaling pathway;Bladder cancer;Non-small cell lung cancer;PI3K-Akt signaling pathway;T cell receptor signaling pathway;Hepatitis B;Melanoma;Glioma;Measles;HTLV-I infection;Pathways in cancer;Small cell lung cancer;Viral carcinogenesis;Pancreatic cancer;Chronic myeloid leukemia
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Furthermore, MALAT1 acted as an endogenous potent regulator by directly binding to miR-124 and down-regulating miR-124 expression. In addition, MALAT1 reversed the inhibitory effect of miR-124 on breast cancer proliferation and was involved in the cyclin-dependent kinase 4 (CDK4) expression.
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miR-124 downregulation leads to breast cancer progression via LncRNA-MALAT1 regulation and CDK4/E2F1 signal activation
Breast Cancer Oncotarget 26918449
MALAT1 miR-22-3p CXCR2 CXCR2;CD182;CDw128b;CMKAR2;IL8R2;IL8RA;IL8RB details
Cytokine-cytokine receptor interaction;Chemokine signaling pathway;Endocytosis;Epithelial cell signaling in Helicobacter pylori infection
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MALAT1 silencing significantly downregulated the expression of the miR-22-3p target gene CXCR2 via reversing the effect of the miR-22-3p, resulting in the aggravation of Oxidized low-density lipoprotein (ox-LDL)-induced endothelial injury; this process was associated with the AKT pathway.
details
The lncRNA MALAT1 protects the endothelium against ox-LDL-induced dysfunction via upregulating the expression of the miR-22-3p target genes CXCR2 and AKT
Kidney Carcinoma FEBS Lett 26364720
MALAT1 miR-204 CXCR4 CXCR4;CD184;D2S201E;FB22;HM89;HSY3RR;LAP-3;LAP3;LCR1;LESTR;NPY3R;NPYR;NPYRL;NPYY3R;WHIM;WHIMS details
Cytokine-cytokine receptor interaction;Chemokine signaling pathway;Endocytosis;Axon guidance;Leukocyte transendothelial migration;Intestinal immune network for IgA production
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By using online tools and a series of mechanistic analysis, we also demonstrated that miR-204-dependent CXCR4 regulation was required in MALAT1 modulating HCCA cell growth, migration and invasion. Taken together, our data indicated that MALAT1 might play an oncogenic role in HCCA through miR-204-dependent CXCR4 regulation, and could be regarded as a therapeutic target in HCCA.
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Long Non-Coding RNA MALAT1 Interacted with miR-204 to Modulates Human Hilar Cholangiocarcinoma Proliferation, Migration and Invasion by Targeting CXCR4
Hilar Cholangiocarcinoma J Cell Biochem 28059437
MALAT1 miR-204 CXCR4 CXCR4;CD184;D2S201E;FB22;HM89;HSY3RR;LAP-3;LAP3;LCR1;LESTR;NPY3R;NPYR;NPYRL;NPYY3R;WHIM;WHIMS details
Cytokine-cytokine receptor interaction;Chemokine signaling pathway;Endocytosis;Axon guidance;Leukocyte transendothelial migration;Intestinal immune network for IgA production
details
Knockdown of MALAT1 inhibited the proliferation, migration, and invasion of human HCCA cell. In addition, chemokine receptor-4 (CXCR4) was involved in MALAT1 induced human HCCA growth, migration, and invasion. By using online tools and a series of mechanistic analysis, we also demonstrated that miR-204-dependent CXCR4 regulation was required in MALAT1 modulating HCCA cell growth, migration and invasion.
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Long Non-Coding RNA MALAT1 Interacted with miR-204 to Modulates Human Hilar Cholangiocarcinoma Proliferation, Migration and Invasion by Targeting CXCR4
Human Hilar Cholangiocarcinoma J Cell Biochem 28059437
MALAT1 miR-375 DNMT1 DNMT1;ADCADN;AIM;CXXC9;DNMT;HSN1E;MCMT details
Cysteine and methionine metabolism;Metabolic pathways
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Therefore, we infer that miR-375 is downregulated partly due to promoter hypermethylation mediated by DNMT1 in HPV-16 positive cervical cancer cells. Our bioinformatics analysis showed that MALAT1 has three putative binding sites with miR-375 and the following dual luciferase assay confirmed two of them. QRT-PCR analysis showed that miR-375 overexpression significantly reduced MALAT1 expression, while MALAT1 overexpression reversely suppressed miR-375 levels
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MiR-375 Is Epigenetically Downregulated by HPV-16 E6 Mediated DNMT1 Upregulation and Modulates EMT of Cervical Cancer Cells by Suppressing lncRNA MALAT1
Cervical Cancer PLoS One 27658300
MALAT1 miR-124 E2F1 E2F1;E2F-1;RBAP1;RBBP3;RBP3 details
HTLV-I infection;Cell cycle;Hepatitis B;Non-small cell lung cancer;Pathways in cancer;Pancreatic cancer;Glioma;Prostate cancer;Melanoma;Bladder cancer;Chronic myeloid leukemia;Small cell lung cancer
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Moreover, the present study elucidated the MALAT1-miR-124-CDK4/E2F1 signaling pathway in breast cancer, which might provide a new approach for tackling breast cancer.
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miR-124 downregulation leads to breast cancer progression via LncRNA-MALAT1 regulation and CDK4/E2F1 signal activation
Breast Cancer Oncotarget 26918449
MALAT1 miR-23c ELAVL1 ELAVL1;ELAV1;HUR;Hua;MelG details
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Moreover, luciferase assays showed that miR-23c, as a target of MALAT1, directly repressed ELAVL1 expression and then decreased the expression of its downstream protein NLRP3.
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Long noncoding RNA MALAT1 regulates renal tubular epithelial pyroptosis by modulated miR-23c targeting of ELAVL1 in diabetic nephropathy
Diabetic Nephropathy Exp Cell Res 27964927
MALAT1 miR-218 EZH2 EZH2;ENX-1;ENX1;EZH1;EZH2b;KMT6;KMT6A;WVS;WVS2 details
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EZH2 is highly expressed and associated with the 3' end region of lncRNA MALAT1 in colorectal cancer, and this association suppressed the expression of E-cadherin. Furthermore, targeted inhibition of MALAT1 or EZH2 reversed EMT and chemoresistance induced by oxaliplatin. Finally, the interaction between lncRNA MALAT1 and miR-218 was observed, which further indicated its prognostic value in patients who received standard FOLFOX (oxaliplatin combine with 5-fluorouracil and leucovorin) treatment.
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MALAT1 Is Associated with Poor Response to Oxaliplatin-Based Chemotherapy in Colorectal Cancer Patients and Promotes Chemoresistance through EZH2
Colorectal Cancer Mol Cancer Ther 28069878
MALAT1 miR-155 FBXW7 FBXW7;AGO;CDC4;FBW6;FBW7;FBX30;FBXO30;FBXW6;SEL-10;SEL10;hAgo;hCdc4 details
Ubiquitin mediated proteolysis
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Further, MALAT1 suppresses cell viability by down-regulating miR-155. FBXW7 mRNA was identified as a direct target of miR-155 in glioma. The miR-155-induced tumorigenesis is mediated through FBXW7 function. Finally, we found that MALAT1 positively regulated FBXW7 expression, which was responsible for glioma progression mediated by MALAT1-miR-155 pathway.
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Tumor-suppressive function of long noncoding RNA MALAT1 in glioma cells by suppressing miR-155 expression and activating FBXW7 function
Glioma Am J Cancer Res 27904771
MALAT1 miR-202 Gli2 GLI2;CJS;HPE9;PHS2;THP1;THP2 details
Hedgehog signaling pathway;Hippo signaling pathway;Pathways in cancer;Basal cell carcinoma
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Moreover, we revealed that MALAT1 was a direct target of miR-202 and knockdown of MALAT1 significantly decreased the expression of Gli2 through negatively regulating miR-202.
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Long non-coding RNA metastasis-associated lung adenocarcinoma transcript 1 regulates the expression of Gli2 by miR-202 to strengthen gastric cancer progression
Gastric Cancer Biomed Pharmacother 27887846
MALAT1 miR-124 GRB2 GRB2;ASH;EGFRBP-GRB2;Grb3-3;MST084;MSTP084;NCKAP2 details
Pathways in cancer;Focal adhesion;MAPK signaling pathway;ErbB signaling pathway;Prostate cancer;Hepatitis C;Hepatitis B;Chemokine signaling pathway;PI3K-Akt signaling pathway;Dorso-ventral axis formation;Osteoclast differentiation;Chronic myeloid leukemia;Gap junction;Fc epsilon RI signaling pathway;Insulin signaling pathway;Renal cell carcinoma ;Endometrial cancer;Non-small cell lung cancer;Proteoglycans in cancer;Glioma;Estrogen signaling pathway;Viral carcinogenesis;Alcoholism;Jak-STAT signaling pathway;Neurotrophin signaling pathway;Natural killer cell mediated cytotoxicity;GnRH signaling pathway;T cell receptor signaling pathway;B cell receptor signaling pathway;Acute myeloid leukemia
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Besides, knockdown of MALAT1 increased the expression of miRNA-124, while ectopic expression of miR-124 decreased MALAT1 expression. In addition, we also verified a direct interaction between miR-124 and 3'UTR of GRB2. MALAT1 can indirectly modulate GRB2 expression via competing miR-124.
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MALAT1-miR-124-RBG2 axis is involved in growth and invasion of HR-HPV-positive cervical cancer cells
Cervical Cancer Tumour Biol 26242259
MALAT1 miR-124 GRB2 GRB2;ASH;EGFRBP-GRB2;Grb3-3;MST084;MSTP084;NCKAP2 details
PI3K-Akt signaling pathway;MAPK signaling pathway;ErbB signaling pathway;Alcoholism;Neurotrophin signaling pathway;Viral carcinogenesis;Acute myeloid leukemia;Estrogen signaling pathway;Chemokine signaling pathway;GnRH signaling pathway;Endometrial cancer;Prostate cancer;Dorso-ventral axis formation; Glioma;Non-small cell lung cancer;Chronic myeloid leukemia;Pathways in cancer;Proteoglycans in cancer;Osteoclast differentiation;Focal adhesion;Hepatitis B;Gap junction;Jak-STAT signaling pathway;Natural killer cell mediated cytotoxicity;Fc epsilon RI signaling pathway;B cell receptor signaling pathway;Hepatitis C; T cell receptor signaling pathway;Insulin signaling pathway;Renal cell carcinoma
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In addition, we also verified a direct interaction between miR-124 and 3'UTR of GRB2. MALAT1 can indirectly modulate GRB2 expression via competing miR-124.
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MALAT1-miR-124-RBG2 axis is involved in growth and invasion of HR-HPV-positive cervical cancer cells
Cervical Cancer Tumour Biol 26242259
MALAT1 miR-216b HIF-2a EPAS1;ECYT4;HIF2A;HLF;MOP2;PASD2;bHLHe73 details
Pathways in cancer;Renal cell carcinoma
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It was HIF-2α, but not HIF-1α induced MALAT1 upregulation in HCC cells. Dual luciferase assay demonstrated that there were at least two binding sites of miR-26b in MALAT1.
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The HIF-2α-MALAT1-miR-216b axis regulates multi-drug resistance of hepatocellular carcinoma cells via modulating autophagy
Hepatocellular Carcinoma Biochem Biophys Res Commun 27524242
MALAT1 miR-129-5p HMGB1 HMGB1;HMG1;HMG3;SBP-1 details
Base excision repair
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Moreover, knockdown of MALAT1 decreased HMGB1 expression, inhibited OS cell growth and promoted apoptosis, while miR-142-3p and miR-129-5p inhibitor partly restored the inhibitory effect of MALAT1 knockdown on HMGB1 expression, OS cell growth and the promotion of apoptosis.
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MALAT1 promotes osteosarcoma development by regulation of HMGB1 via miR-142-3p and miR-129-5p
Osteosarcoma Cell Cycle 28346809
MALAT1 miR-142-3p HMGB1 HMGB1;HMG1;HMG3;SBP-1 details
Base excision repair
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Moreover, knockdown of MALAT1 decreased HMGB1 expression, inhibited OS cell growth and promoted apoptosis, while miR-142-3p and miR-129-5p inhibitor partly restored the inhibitory effect of MALAT1 knockdown on HMGB1 expression, OS cell growth and the promotion of apoptosis.
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MALAT1 promotes osteosarcoma development by regulation of HMGB1 via miR-142-3p and miR-129-5p
Osteosarcoma Cell Cycle 28346809
MALAT1 miR-122 IGF-1R IGF1R;CD221;IGFIR;IGFR;JTK13 details
Adherens junction;HIF-1 signaling pathway;Oocyte meiosis;Endocytosis;PI3K-Akt signaling pathway;Focal adhesion;Prostate cancer;Long-term depression;Ovarian steroidogenesis;Proteoglycans in cancer;Glioma;Progesterone-mediated oocyte maturation;Pathways in cancer;Melanoma;Transcriptional misregulation in cancer
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Furthermore, the miR-122-IGF-1R signaling correlated with the dysregulated MALAT1 expression in gastric cancer.
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The lncRNA MALAT1 is a novel biomarker for gastric cancer metastasis
Gastric Cancer Oncotarget 27486823
MALAT1 miR-183 ITGB1 ITGB1;CD29;FNRB;GPIIA;MDF2;MSK12;VLA-BETA;VLAB details
Axon guidance;Phagosome;PI3K-Akt signaling pathway;Focal adhesion;ECM-receptor interaction;Toxoplasmosis;Cell adhesion molecules (CAMs);Leukocyte transendothelial migration;Regulation of actin cytoskeleton;Hypertrophic cardiomyopathy (HCM);Dilated cardiomyopathy;Proteoglycans in cancer;Arrhythmogenic right ventricular cardiomyopathy (ARVC);Bacterial invasion of epithelial cells;Leishmaniasis;Pathogenic Escherichia coli infection;Pertussis;Pathways in cancer;Small cell lung cancer;Shigellosis
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We further found that the expression and function of miR-183 were suppressed by MALAT1. Integrin β1 (ITGB1) was then speculated and confirmed as a direct target of miR-183. We also illustrated that MALAT1 may function as a sponge competitive endogenous RNA (ceRNA) for miR-183, and thus regulate the molecular expression of ITGB1.
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Deregulation of miR-183 promotes melanoma development via lncRNA MALAT1 regulation and ITGB1 signal activation
Melanoma Oncotarget 27966454
MALAT1 miR-124 JAG1 JAG1;AGS;AHD;AWS;CD339;HJ1;JAGL1 details
Notch signaling pathway
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In the present study, lncRNA-MALAT1 was specifically upregulated in tongue cancer cell lines and overexpression promoted tongue cancer cell growth by targeting miR-124. Knockdown of MALAT1 suppressed the growth and invasion of human tongue cancer cells and inhibited metastasis in vitro and in vivo. In addition, miR-124-dependent jagged1 (JAG1) regulation was required for MALAT1-induced tongue cancer cell growth. Our data revealed that MALAT1 inhibited tongue cancer cell growth and metastasis through miR-124-dependent JAG1 regulation
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Long non-coding RNA MALAT1 interacts with miR-124 and modulates tongue cancer growth by targeting JAG1
Tongue Cancer Oncol Rep 28260102
MALAT1 miR-448 KDM5B KDM5B;CT31;JARID1B;PLU-1;PLU1;PPP1R98;PUT1;RBBP2H1A details
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KDM5B-silencing in the TNBC cells correlated with the upregulation of hsa-miR-448 and led to suppression of MALAT1 expression with decreased migration, invasion and clonogenic capacity in vitro, as well as, poor survival in vivo.
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Aberrant KDM5B expression promotes aggressive breast cancer through MALAT1 overexpression and downregulation of hsa-miR-448
Breast Cancer BMC Cancer 26917489
MALAT1 miR-206 KRAS KRAS;C-K-RAS;CFC2;K-RAS2A;K-RAS2B;K-RAS4A;K-RAS4B;KI-RAS;KRAS1;KRAS2;NS;NS3;RASK2 details
Natural killer cell mediated cytotoxicity;MAPK signaling pathway;ErbB signaling pathway;Chemokine signaling pathway;PI3K-Akt signaling pathway;Insulin signaling pathway;Hepatitis C;Long-term potentiation;Progesterone-mediated oocyte maturation;Dorso-ventral axis formation;Axon guidance;Endometrial cancer;Regulation of actin cytoskeleton;VEGF signaling pathway;Long-term depression;Estrogen signaling pathway;Cholinergic synapse;Melanogenesis;Hepatitis B;Viral carcinogenesis;Tight junction;Neurotrophin signaling pathway;GnRH signaling pathway;Gap junction;Glioma;T cell receptor signaling pathway; Alcoholism;Prostate cancer;Serotonergic synapse;Bladder cancer;Non-small cell lung cancer;Chronic myeloid leukemia;HTLV-I infection;B cell receptor signaling pathway;Pathways in cancer;Aldosterone-regulated sodium reabsorption;Colorectal cancer;Melanoma;Acute myeloid leukemia;Proteoglycans in cancer;Pancreatic cancer;Renal cell carcinoma;Thyroid cancer;Fc epsilon RI signaling pathway
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We also show that Malat1 functions as a competing endogenous RNA (ceRNA) for miR-206. Because miR-206 directly suppresses expression of ANXA2 and KRAS, which are thought to promote GBC progression, Malat1 binding of miR-206 in GBC tissue and cells has an oncogenic effect. Conversely, Malat1 knockdown inhibits proliferation and invasion by GBC cells while increasing apoptosis.
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Long non-coding RNA Malat1 promotes gallbladder cancer development by acting as a molecular sponge to regulate miR-206
Gallbladder Cancer Oncotarget 27191262
MALAT1 miR-363-3p MCL-1 MCL1;BCL2L3;EAT;MCL1-ES;MCL1L;MCL1S;Mcl-1;TM;bcl2-L-3;mcl1/EAT details
PI3K-Akt signaling pathway
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Real-time quantitative PCR and Western blot analysis indicated that MALAT1 regulated Myeloid cell leukaemia-1 (MCL-1) expression as a competing endogenous RNA (ceRNA) for miR-363-3p in GBC cells.
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The lncRNA MALAT1 functions as a competing endogenous RNA to regulate MCL-1 expression by sponging miR-363-3p in gallbladder cancer
Gallbladder Cancer J Cell Mol Med 27420766
MALAT1 miR-224-5p MMP14 MMP14;MMP-14;MMP-X1;MT-MMP;MT-MMP 1;MT1-MMP;MT1MMP;MTMMP1;WNCHRS details
GnRH signaling pathway
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We determined that MALAT1 promotes melanoma cells proliferation, invasion and migration by sponging miR-22. MiR-22 was decreased and acted as a tumor suppressor in melanoma, and MMP14 and Snail were the functional targets of miR-22. Furthermore, MALAT1 could modulate MMP14 and Snail by operating as a competing endogenous RNA (ceRNA) for miR-22.
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Long non-coding RNA MALAT1 acts as a competing endogenous RNA to promote malignant melanoma growth and metastasis by sponging miR-22
Malignant Melanoma Oncotarget 27564100
MALAT1 miR-101b Rac1 RAC1;MIG5;Rac-1;TC-25;p21-Rac1 details
Axon guidance;MAPK signaling pathway;Chemokine signaling pathway;Natural killer cell mediated cytotoxicity;Fc epsilon RI signaling pathway;B cell receptor signaling pathway;Phagosome;PI3K-Akt signaling pathway;Pancreatic cancer;Wnt signaling pathway;Leukocyte transendothelial migration;Amyotrophic lateral sclerosis (ALS);VEGF signaling pathway;Regulation of actin cytoskeleton;Proteoglycans in cancer;Epithelial cell signaling in Helicobacter pylori infection;Osteoclast differentiation;Shigellosis;Focal adhesion;Adherens junction;Neurotrophin signaling pathway;Salmonella infection;Renal cell carcinoma;Viral myocarditis;Pancreatic secretion;Pathways in cancer;Colorectal cancer;Toll-like receptor signaling pathway;Fc gamma R-mediated phagocytosis;Bacterial invasion of epithelial cells;Viral carcinogenesis
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Luciferase reporter assay indicated that MALAT1 and RAS-related C3 botulinum substrate 1 (Rac1) are targets of miR-101b. We uncovered that MALAT1 regulates Rac1 expression through miR-101b as a competing endogenous RNA (ceRNA), thereby influencing the proliferation, cell cycle and activation of primary HSCs.
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MALAT1 functions as a competing endogenous RNA to mediate Rac1 expression by sequestering miR-101b in liver fibrosis
Liver Fibrosis Cell Cycle 26697839
MALAT1 miR-25 RBM24 RBM24;RNPC6;dJ259A10.1 details
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Similarly, ectopic miR-25 expression suppressed NPC cellular growth and motility by targeting the pro-oncogenic lncRNA MALAT1, and the knockdown of MALAT1 expression exhibited similar effects as RBM24 restoration in NPC cells.
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RBM24 suppresses cancer progression by upregulating miR-25 to target MALAT1 in nasopharyngeal carcinoma
Nasopharyngeal Carcinoma Cell Death Dis 27584791
MALAT1 miR-1 slug SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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In addition, our findings demonstrate a reciprocal negative control relationship between MALAT1 and miR-1: downregulation of MALAT1 increased expression of microRNA-1 (miR-1), while overexpression of miR-1 decreased MALAT1 expression. Slug was identified as a direct target of miR-1. We proposed that MALAT1 exerted its function through the miR-1/slug axis.
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Reciprocal regulation of Hsa-miR-1 and long noncoding RNA MALAT1 promotes triple-negative breast cancer development
Breast Cancer Tumour Biol 26676637
MALAT1 miR-1 slug SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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Furthermore, we found that there was reciprocal repression between MALAT1 and miR-1, and slug was identified as a downstream target of miR-1.
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The role of MALAT1/miR-1/slug axis on radioresistance in nasopharyngeal carcinoma
Nasopharyngeal Carcinoma Tumour Biol 26482776
MALAT1 miR-204 SLUG SNAI2;SLUG;SLUGH1;SNAIL2;WS2D details
Hippo signaling pathway;Adherens junction
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In particular, MALAT1 upregulated the expression of miR-204 target gene SLUG through competitively 'spongeing' miR-204.
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LncRNA MALAT1 exerts oncogenic functions in lung adenocarcinoma by targeting miR-204
Lung Adenocarcinoma Am J Cancer Res 27294002
MALAT1 miR-204 Smad4 SMAD4;DPC4;JIP;MADH4;MYHRS details
Pancreatic cancer;Cell cycle;Wnt signaling pathway;TGF-beta signaling pathway;Hippo signaling pathway;Adherens junction;Hepatitis B;HTLV-I infection;Pathways in cancer;Colorectal cancer;Chronic myeloid leukemia
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In vitro experiments revealed that MALAT1 acted as a positive regulator of osteogenic differentiation by repressing miR-204 expression and activity and thereby promoting expression of osteoblast-specific markers, including alkaline phosphatase, mineralized bone matrix formation and osteocalcin. Mechanistically, we identified Smad4 as a direct target of miR-204. Importantly, MALAT1 could directly interact with miR-204 and overexpression of miR-204 efficiently reversed the upregulation of Smad4 induced by MALAT1. Thus, MALAT1 positively regulated the expression of Smad4 through sponging miR-204, and promoted osteogenic differentiation of VICs.
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LncRNA MALAT1 sponges miR-204 to promote osteoblast differentiation of human aortic valve interstitial cells through up-regulating Smad4.
Calcific aortic valve disease Int J Cardiol 28522163
MALAT1 miR-204 Smad4 SMAD4;DPC4;JIP;MADH4;MYHRS details
Cell cycle; Wnt signaling pathway;TGF-beta signaling pathway;Hippo signaling pathway;Adherens junction;Hepatitis B;HTLV-I infection;Pathways in cancer; Colorectal cancer;Pancreatic cancer;Chronic myeloid leukemia
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Mechanistically, we identified Smad4 as a direct target of miR-204. Importantly, MALAT1 could directly interact with miR-204 and overexpression of miR-204 efficiently reversed the upregulation of Smad4 induced by MALAT1.
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LncRNA MALAT1 sponges miR-204 to promote osteoblast differentiation of human aortic valve interstitial cells through up-regulating Smad4.
Calcific aortic valve disease Int J Cardiol 28522163
MALAT1 miR-200c TGF-beta TGFB1;CED;DPD1;LAP;TGFB;TGFbeta details
Hippo signaling pathway;MAPK signaling pathway;Cytokine-cytokine receptor interaction;Cell cycle;Endocytosis;TGF-beta signaling pathway;Renal cell carcinoma;Hypertrophic cardiomyopathy (HCM);Chronic myeloid leukemia;Toxoplasmosis;Pathways in cancer;Osteoclast differentiation;HTLV-I infection;Proteoglycans in cancer;Intestinal immune network for IgA production;Rheumatoid arthritis;Dilated cardiomyopathy;Hepatitis B;Pancreatic cancer;Leishmaniasis;Tuberculosis;Chagas disease (American trypanosomiasis);Colorectal cancer; Malaria
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MALAT1 and miR-200c are reciprocally repressed, and TGF-β increased MALAT1 expression by inhibiting miR-200c.
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Disrupting MALAT1/miR-200c sponge decreases invasion and migration in endometrioid endometrial carcinoma
Endometrioid Endometrial Carcinoma Cancer Lett 27693631
MALAT1 miR-146b-5p TRAF6 TRAF6;MGC:3310;RNF85 details
NF-kappa B signaling pathway;MAPK signaling pathway;Ubiquitin mediated proteolysis;Endocytosis;Chagas disease (American trypanosomiasis);Osteoclast differentiation;Toll-like receptor signaling pathway;Herpes simplex infection;NOD-like receptor signaling pathway;Hepatitis C;RIG-I-like receptor signaling pathway;Neurotrophin signaling pathway; Toxoplasmosis;Measles;Pertussis;Leishmaniasis;Tuberculosis;Small cell lung cancer;Epstein-Barr virus infection;Pathways in cancer
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Remarkably, TNF receptor associated factor 6 (TRAF6) was confirmed as a direct target of miR-146b-5p in HCC and miR-146b-5p exerted the tumor suppression roles through inhibiting the phosphorylation of Akt mediated by TRAF6. Furthermore, we identified long non-coding RNA MALAT1 as a molecular sponge of miR-146b-5p to down-regulate its expression in HCC.
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Down-regulation of miR-146b-5p by long noncoding RNA MALAT1 in hepatocellular carcinoma promotes cancer growth and metastasis
Hepatocellular Carcinoma Oncotarget 28404923
MALAT1 miR-146b-5p TRAF6 TRAF6;MGC:3310;RNF85 details
Endocytosis;MAPK signaling pathway;NF-kappa B signaling pathway;Ubiquitin mediated proteolysis;Osteoclast differentiation;Chagas disease (American trypanosomiasis);Small cell lung cancer;Measles; Toxoplasmosis;Tuberculosis;Toll-like receptor signaling pathway;Pathways in cancer;NOD-like receptor signaling pathway;RIG-I-like receptor signaling pathway;Neurotrophin signaling pathway; Hepatitis C;Pertussis;Epstein-Barr virus infection;Leishmaniasis;Herpes simplex infection
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Remarkably, TNF receptor associated factor 6 (TRAF6) was confirmed as a direct target of miR-146b-5p in HCC and miR-146b-5p exerted the tumor suppression roles through inhibiting the phosphorylation of Akt mediated by TRAF6. Furthermore, we identified long non-coding RNA MALAT1 as a molecular sponge of miR-146b-5p to down-regulate its expression in HCC.
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Down-regulation of miR-146b-5p by long noncoding RNA MALAT1 in hepatocellular carcinoma promotes cancer growth and metastasis.
Hepatocellular carcinoma Oncotarget 28404923
MALAT1 miR-203 TS TYMS;HST422;TMS;TS details
Pyrimidine metabolism;One carbon pool by folate;Metabolic pathways
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LncRNA MALAT1 inhibition re-sensitized TMZ resistant cells through up-regulating miR-203 and down-regulating TS expression. On the other hand, MALAT1 overexpression promoted resistance by suppressing miR-203 and promoting TS expression.
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MALAT1 is a prognostic factor in glioblastoma multiforme and induces chemoresistance to temozolomide through suppressing miR-203 and promoting thymidylate synthase expression
Glioblastoma Oncotarget 28187000
MALAT1 miR-200a ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
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We further demonstrated MALAT1 promote KIRC proliferation and metastasis through sponging miR-200s in vitro and in vivo. In addition, miR-200c can partly reverse the MALAT1's stimulation on proliferation and metastasis in KIRC. In summary we unveil a branch of the MALAT1/miR-200s/ZEB2 pathway that regulates the progression of KIRC.
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LncRNA MALAT1 functions as a competing endogenous RNA to regulate ZEB2 expression by sponging miR-200s in clear cell kidney carcinoma
Kidney Carcinoma Oncotarget 26461224
MALAT1 miR-200b ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
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We further demonstrated MALAT1 promote KIRC proliferation and metastasis through sponging miR-200s in vitro and in vivo. In addition, miR-200c can partly reverse the MALAT1's stimulation on proliferation and metastasis in KIRC. In summary we unveil a branch of the MALAT1/miR-200s/ZEB2 pathway that regulates the progression of KIRC.
details
LncRNA MALAT1 functions as a competing endogenous RNA to regulate ZEB2 expression by sponging miR-200s in clear cell kidney carcinoma
Kidney Carcinoma Oncotarget 26461224
MALAT1 miR-200c ZEB2 ZEB2;HSPC082;SIP-1;SIP1;SMADIP1;ZFHX1B details
details
We further demonstrated MALAT1 promote KIRC proliferation and metastasis through sponging miR-200s in vitro and in vivo. In addition, miR-200c can partly reverse the MALAT1's stimulation on proliferation and metastasis in KIRC. In summary we unveil a branch of the MALAT1/miR-200s/ZEB2 pathway that regulates the progression of KIRC.
details
LncRNA MALAT1 functions as a competing endogenous RNA to regulate ZEB2 expression by sponging miR-200s in clear cell kidney carcinoma
Kidney Carcinoma Oncotarget 26461224
MALAT1 miR-140 ZO-1 TJP1;ZO-1 details
Adherens junction;Tight junction;Gap junction;Vibrio cholerae infection;Epithelial cell signaling in Helicobacter pylori infection;Salmonella infection
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Functionally, knockdown of MALAT1 resulted in an impairment and increased the permeability of BTB as well as decreased the expression of ZO-1, occludin and claudin-5 in GECs. Further, there was reciprocal repression between MALAT1 and miR-140, and miR-140 mediated the effects that MALAT1 knockdown exerted.
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Knockdown of long non-coding RNA MALAT1 increases the blood-tumor barrier permeability by up-regulating miR-140
Blood-Tumor Biochim Biophys Acta 26619802