LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
NEAT1 miR-449b-5p BCL2 BCL2;Bcl-2;PPP1R50 details
HIF-1 signaling pathway;NF-kappa B signaling pathway;Protein processing in endoplasmic reticulum;Pathways in cancer;Small cell lung cancer;Prostate cancer;PI3K-Akt signaling pathway;Apoptosis;Focal adhesion; Neurotrophin signaling pathway;Cholinergic synapse;Amyotrophic lateral sclerosis (ALS);Colorectal cancer;Hepatitis B;Epstein-Barr virus infection; Toxoplasmosis;Tuberculosis
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Furthermore, we verified that c-Met was a directly target of miR-449b-5p. Rescue assays demonstrated NEAT1 functions a molecular sponge for miR-449b-5p and leads to the upregulation of c-Met.
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Long noncoding RNA NEAT1 promotes glioma pathogenesis by regulating miR-449b-5p/c-Met axis
Glioma Tumour Biol 26242266
NEAT1 miR-214 beta-catenin details
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NEAT1 knockout inhibited thyroid cancer cell survival, migration and invasion, along with reduced β-catenin (a direct target of miRNA-214) protein expression.
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Long non-coding RNA NEAT1 promotes malignant progression of thyroid carcinoma by regulating miRNA-214
Thyroid Carcinoma Int J Oncol 28000845
NEAT1 miR-107 CDK6 CDK6;MCPH12;PLSTIRE details
Hepatitis B;Cell cycle;p53 signaling pathway;PI3K-Akt signaling pathway;Measles;Pathways in cancer; Small cell lung cancer;Non-small cell lung cancer;Viral carcinogenesis;Pancreatic cancer;Glioma;Melanoma;Chronic myeloid leukemia
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Furthermore, NEAT1 regulated CDK6 expression in LSCC cells which was mediated by miR-107.
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Long noncoding RNA NEAT1 promotes laryngeal squamous cell cancer through regulating miR-107/CDK6 pathway
Laryngeal Squamous Cell Cancer J Exp Clin Cancer Res 26822763
NEAT1 miR-98-5p CTR1 SLC31A1;COPT1;CTR1 details
Mineral absorption
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NEAT1 may act as a competing endogenous lncRNA to upregulate EGCG-induced CTR1 by sponging hsa-mir-98-5p in NSCLC.
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NEAT1 upregulates EGCG-induced CTR1 to enhance cisplatin sensitivity in lung cancer cells
Lung Cancer Oncotarget 27270317
NEAT1 miR-377-3p E2F3 E2F3;E2F-3 details
Glioma;Cell cycle;Hepatitis B;HTLV-I infection;Pathways in cancer;Pancreatic cancer;Prostate cancer;Melanoma;Bladder cancer;Non-small cell lung cancer; Chronic myeloid leukemia;Small cell lung cancer
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Additionally, by using bioinformatics study and RNA pull down combined with luciferase reporter assays, we demonstrated that NEAT1 functioned as a competing endogenous RNA (ceRNA) for hsa-miR-377-3p, antagonized its functions and led to the de-repression of its endogenous targets E2F3, which was a core oncogene in promoting NSCLC progression.
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Long non-coding RNA NEAT1 promotes non-small cell lung cancer progression through regulation of miR-377-3p-E2F3 pathway
Non-Small Cell Lung Cancer Oncotarget 27351135
NEAT1 miR-101 EZH2 EZH2;ENX-1;ENX1;EZH1;EZH2b;KMT6;KMT6A;WVS;WVS2 details
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In our research, lncRNA-NEAT1 was specifically upregulated in BC cell lines and promoted BC cell growth through targeting miR-101. Knockdown of NEAT1 inhibited the proliferation and DNA synthesis of human BC cell in vitro. In addition, the regulation of EZH2 by miR-101 was required in NEAT1 induced BC cell growth. These findings indicated that NEAT1 might suppress the tumor growth via miR-101 dependent EZH2 regulation.
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The long non-coding RNA NEAT1 interacted with miR-101 modulates breast cancer growth by targeting EZH2
Breast Cancer Arch Biochem Biophys 28034643
NEAT1 miR-101-3p EZH2 EZH2;ENX-1;ENX1;EZH1;EZH2b;KMT6;KMT6A;WVS;WVS2 details
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In our research, lncRNA-NEAT1 was specifically upregulated in BC cell lines and promoted BC cell growth through targeting miR-101. Knockdown of NEAT1 inhibited the proliferation and DNA synthesis of human BC cell in vitro. In addition, the regulation of EZH2 by miR-101 was required in NEAT1 induced BC cell growth. These findings indicated that NEAT1 might suppress the tumor growth via miR-101 dependent EZH2 regulation.
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The long non-coding RNA NEAT1 interacted with miR-101 modulates breast cancer growth by targeting EZH2
Breast Cancer Arch Biochem Biophys 28034643
NEAT1 miR-548 FUS FUS;ALS6;ETM4;FUS1;HNRNPP2;POMP75;TLS details
Transcriptional misregulation in cancer
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In addition, the RNA-binding protein fused in sarcoma/translocated in liposarcoma (FUS/TLS) physically interacted with NEAT1, and reducing the expression of FUS/TLS also induced cell apoptosis. Multiple miRNAs were identified as regulators of NEAT1, but only overexpression of miR-548ar was able to decrease NEAT1 expression and promote apoptosis.
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NEAT1 is Required for Survival of Breast Cancer Cells Through FUS and miR-548
Breast Cancer Gene Regul Syst Bio 27147820
NEAT1 miR-124-3p HuR ELAVL1;ELAV1;HUR;Hua;MelG details
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These results suggested that lncRNA NEAT1, whose expression was collaboratively controlled by HuR and miR-124-3p, could regulate ovarian carcinogenesis and may serve as a potential target for antineoplastic therapies.
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HuR-regulated lncRNA NEAT1 stability in tumorigenesis and progression of ovarian cancer
Ovarian Cancer Cancer Med 27075229
NEAT1 miR-181d-5p SOX5 SOX5;L-SOX5;L-SOX5B;L-SOX5F details
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In conclusion, knockdown of NEAT1 increased BTB permeability by binding to miR-181d-5p and then reducing tight junction protein expression by targeting SOX5.
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Long non-coding RNA NEAT1 regulates permeability of the blood-tumor barrier via miR-181d-5p-mediated expression changes in ZO-1, occludin, and claudin-5
Blood-Tumor Biochim Biophys Acta 28185956
NEAT1 miR-129-5p WNT4 WNT4;SERKAL;WNT-4 details
Wnt signaling pathway; Hedgehog signaling pathway;Hippo signaling pathway;Melanogenesis;HTLV-I infection;Pathways in cancer;Proteoglycans in cancer;Basal cell carcinoma
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Silencing of miR-129-5p expression by NEAT1 results in upregulation of WNT4 expression, a target of miR-129-5p, which leads to activation of oncogenic WNT signaling.
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Dysregulation of the BRCA1/long non-coding RNA NEAT1 signaling axis contributes to breast tumorigenesis
Breast Tumorigenesis Oncotarget 27556296
NEAT1 miR-204 ZEB1 ZEB1;AREB6;BZP;DELTAEF1;FECD6;NIL2A;PPCD3;TCF8;ZFHEP;ZFHX1A details
Transcriptional misregulation in cancer
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ZEB1 was identified as a downstream target of miR-204 and NEAT1 upregulated ZEB1 expression by negatively regulating miR-204 expression.
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The long non-coding RNA NEAT1 regulates epithelial to mesenchymal transition and radioresistance in through miR-204/ZEB1 axis in nasopharyngeal carcinoma
Nasopharyngeal Carcinoma Tumour Biol 27020592