LncCeRBase

Welcome to the LncCeRBase DataBase!
LncRNA MiRNA Gene Gene name Pathway Name Description Title Disease/Tissue Journal PubMed ID
XIST miR-449a BCL2 BCL2;Bcl-2;PPP1R50 details
HIF-1 signaling pathway;NF-kappa B signaling pathway;Protein processing in endoplasmic reticulum;Pathways in cancer;Small cell lung cancer;Prostate cancer;PI3K-Akt signaling pathway;Apoptosis;Focal adhesion; Neurotrophin signaling pathway;Cholinergic synapse;Amyotrophic lateral sclerosis (ALS);Colorectal cancer;Hepatitis B;Epstein-Barr virus infection; Toxoplasmosis;Tuberculosis
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We further identified reciprocal repression between XIST and miR-449a, which eventually influenced the expression of Bcl-2: XIST functioned as a miRNA sponge of miR-449a, which was a negative regulator of Bcl-2.
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The lncRNA XIST exhibits oncogenic properties via regulation of miR-449a and Bcl-2 in human non-small cell lung cancerThis article has been corrected since Advanced Online Publication, and an erratum is also printed in this issue
Non-Small Cell Lung Cancer Acta Pharmacol Sin 28248928
NEAT1 miR-377-3p E2F3 E2F3;E2F-3 details
Glioma;Cell cycle;Hepatitis B;HTLV-I infection;Pathways in cancer;Pancreatic cancer;Prostate cancer;Melanoma;Bladder cancer;Non-small cell lung cancer; Chronic myeloid leukemia;Small cell lung cancer
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Additionally, by using bioinformatics study and RNA pull down combined with luciferase reporter assays, we demonstrated that NEAT1 functioned as a competing endogenous RNA (ceRNA) for hsa-miR-377-3p, antagonized its functions and led to the de-repression of its endogenous targets E2F3, which was a core oncogene in promoting NSCLC progression.
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Long non-coding RNA NEAT1 promotes non-small cell lung cancer progression through regulation of miR-377-3p-E2F3 pathway
Non-Small Cell Lung Cancer Oncotarget 27351135
UCA1 miR-193a-3p ERBB4 ERBB4;ALS19;HER4;p180erbB4 details
ErbB signaling pathway;Calcium signaling pathway;Endocytosis;Proteoglycans in cancer
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Moreover, mechanistic investigations showed that UCA1 upregulated the expression of miR-193a-3p target gene ERBB4 through competitively 'spongeing' miR-193a-3p.
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LncRNA-UCA1 exerts oncogenic functions in non-small cell lung cancer by targeting miR-193a-3p
Non-Small Cell Lung Cancer Cancer Lett 26655272
LINC00858 miR-422a KLK4 KLK4;AI2A1;ARM1;EMSP;EMSP1;KLK-L1;PRSS17;PSTS;kallikrein details
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Moreover, LINC00858 functioned as a competitive endogenous RNA (ceRNA), effectively becoming sponge for miR-422a and thereby modulating the expression of kallikrein-related peptidase 4 (KLK4).
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Long intergenic non-protein coding RNA 00858 functions as a competing endogenous RNA for miR-422a to facilitate the cell growth in non-small cell lung cancer
Non-Small Cell Lung Cancer Aging (Albany NY) 28177876
XIST miR-103a MAP3K3 MAP3K3;MAPKKK3;MEKK3 details
MAPK signaling pathway;Neurotrophin signaling pathway;GnRH signaling pathway; HTLV-I infection
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Finally, lncRNA-Xist knockdown and miR-103a overexpression independently down-regulated MAP3K3 pathway.
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Long non-coding RNA Xist promotes progression of non-small-cell lung cancer (NSCLC) by modulating miR-103a and MAP3K3 pathway
Non-Small Cell Lung Cancer Int J Clin Exp Pathol Long non-coding RNA Xist promotes progression of non-small-cell lung cancer (NSCLC) by modulating miR-103a and MAP3K3 pathway
SNHG1 miR-101-3p SOX9 SOX9;CMD1;CMPD1;SRA1;SRXX2;SRXY10 details
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In addition, we identified that SOX9 acted as a target of miR-101-3p, and SOX9 played the oncogenic role in NSCLC by activating Wnt/β-catenin signaling pathway.
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Upregulated lncRNA SNHG1 contributes to progression of non-small cell lung cancer through inhibition of miR-101-3p and activation of Wnt/β-catenin signaling pathway
Non-Small Cell Lung Cancer Oncotarget 28147312