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Gene detail [Fasta]

Species Acromyrmex echinatior
GeneAECH17854
Positionscaffold274:550502..561665[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/aech_20/?name=AECH17854
sequence mRNA:
>AECH17854-RA
ATGATTGACTTCCAGAAAACATTTGAATCCGAATCTGGTAAGGAATCCGGGTCTGATTCTGAGAATGAGAGCAAAAGTGA
TAGCTCTTCTTCCGGCAGTAACAGCGGATCAGGATCTGGATCTGAAAGCGACTCTAGCTCCTCGAGCGGTTCCGGTTCCG
GATCAGGCTCCGACTCGGAAAAGTCGGAGAAGTCGGATGCACCTGCTGCACAAAGCGATAGCTTCCAGAGCAAAGGCTCG
AATCACAGCACCGAAGCAAAGCTTAGAGTTAAACATGAGTCTAGTCGCGAGTGGGACGAGAATCCTGACATATACGGCAT
TAGGAGGTCCGGGCGTTCCAGGAAAGAACCTGATAGGCTCGCAACGAATCGCGAAAGCGACAGTGATGGTCGCAAAAAGT
TTAAGAAGAAAAGTTCACATAATTCGTGGAATTCAGAAAGTTCAGATTCAGAATCTGATGAAACTGAGAATCGTAGACCT
CCACCTAGCAAATCCTTGAACAGACGCGCGGCGCAAAAAGCAAAAGAGAAAGCCAGAGTGCGAAAGAAACGTATCTCTGA
TTCTTCTGATAATTCTTCCTTTGACAGTGATGATAATAGAAGGCAGATTAATAGACGGGCAGGCACTGCAGTTAGTTATA
AAGAGCAAAGTGAAGAAGGTACTGACAGCGAGGATTTGGTTGAAGTTGACGAATCGACCGCTGCGTCAACAGAACCTGAC
AATGCGGAAACTATTGAACAAATTTTGGGACAGAGGATGGGCAAGAAAGGAGTTACCGGCAACATAACGACAATCTATGC
TGTCGAAGACAACGGTGATCCTAATCCACAAGATCTAAGTAATCTGGAAACTGAGGTACAATACTTGATCAAATGGAAAG
GCTGGTCTCACATACATAACACATGGGAATCAGAGGAATCTTTAAAAGCACAAAAAGTAAAAGGATTGAAGAAGTTAGAC
AATTTTATCAAACGTGAACGTGTAATTGAGTATACGAGAGAGCACGCTGAGCCAGAGGAGTTGGATTATTTAGAATGTCA
ATTGGAACTTAAACAAGATCTTCTGAAAAGTTACAACAATGTTGAGAGGATTATTGCTGATTACAAGAAACCAGACTCAG
TATATCCTGATTATTTCTGTAAATGGGAAAATTTGTCATATGCTGAAGCTACATGGGAAGATGGAATTTTGATAGTGAAA
AAATGGCCAGAGAAGATAAAGGAATTTTGTGACAGAGAAGATTCCAAAAGAACACCGAGCAAGCATTGCAAAGTTCTCAA
ATCTAGACCTAAGTTTTATCAGTTGAATGAACAACCTACTTACATGGGCAAGGAAAAAGATTTAATATTGAGAGATTATC
AAATGGATGGACTTAATTGGTTGATACACTCTTGGTGCAAAGAAAATAGTGTTATATTAGCCGATGAAATGGGTCTCGGC
AAAACAATCCAAACGATATGCTTCCTTTATTATTTATTTCACACGCAACACCTTCACGGACCATTTTTATTAGTAGTTCC
TCTGTCAACTATGACTTCCTGGCAAAGAGAGATGTCTCAATGGGCACCTGATATAAATTTTGTTACTTACTTGGGTGACA
TCAATTCTCGTAATGTCATTAGGGAATACGAATGGTGCTACCAGGATTCGAAGAGATTGAAGTTTAACGTCATTCTTACG
ACGTATGAGATAGTACTTAAAGATAAAACATTTTTGGGTGCCTTAAATTGGGCGGTATTGCTAGTAGACGAAGCTCATCG
ATTGAAGAATGATGATTCTTTATTATACAAAGCACTTACCGAATTTCATACCAATCATCGTTTATTGATTACTGGTACTC
CATTACAGAATAGCTTGAAGGAGTTATGGGCCTTATTACATTTCATTATGCCTTCAAAATTTGCTTCTTGGGAAGAATTT
GAAAAGCAACACGATAATGCTGCACAGAAGGGATACTCCAAGTTGCACAAGCAATTAGAACCATTTATTCTACGTCGAGT
TAAGAAAGATGTCGAGAAATCTTTGCCTGCTAAAGTCGAACAGATCTTACGAGTAGAAATGACATCCTTGCAAAAACAAT
ATTACAAGTGGATATTGACAAAAAATTATGAAGCATTGCGAAAAGGCGTGAAAGGATCTACTACGACATTCTTGAACATT
GTTATTGAATTGAAAAAATGCTGTAATCACGCCTTTCTCACGAAACCAATGGATGCCGAAAGAGAAAAGACTAACGAAGA
TTATTTGCAACAATTAATTCGCGGTTCTGGCAAGTTAGTGCTTCTAGATAAATTACTAGTGAGATTGCGCGACACGGGAC
ATAGAGTACTGATATTCAGTCAAATGGTCAGAATGTTGGATATTCTTGGTGAATATCTACAAAGGAGGCATTTCCCATTC
CAAAGATTAGATGGAAGTATAAAGGGGGAATTAAGAAAACAAGCGTTGGATCACTTCAATGCTGAGGGATCGCAAGATTT
TTGTTTTCTATTGTCGACGCGAGCCGGTGGTCTCGGCATTAATCTTGCCACTGCAGACACTGTGATAATTTTTGATTCTG
ACTGGAATCCGCAAAATGATTTGCAGGCACAAGCCAGAGCACATCGAATAGGACAAAAGAATAAGGTAAATATTTATCGA
TTGGTTACTAAAAAGTCAGTCGAGGAAGAAATTGTTGAACGTGCGAAGCAAAAAATGGTCTTAGATCATTTAGTGATACA
GCGAATGGATACAACCGGTAGGACAGTGTTAGATAAAAAGAACGCAGGAACCAATAGTAATCCATTTAACAAAGAAGATT
TGAATGCTATTTTAAAATTTGGCGCTGAGGATTTGTTCAAAGACGAAGAAGATGGAGATGAGGAACCAACTTGCGATATT
GACGAAATATTAAGAAGAGCTGAAACGAGAGACGAAGGACCGACAACGGTTGGCGATGAATTGTTGTCCGCTTTCAAAGT
CGCCAGTTTTAAAACAGCATTTGAAGAGGATTTGGAACCTATTAATCAGCCAAATGATAACGATGATGAAAGTAAAGATT
GGGCCGAAATCATTCCGGAGAATTTTCGAAGGAAGATAGAAGAGGAGGAAAAGTCCAAAGAAATGGAGGATCTGTATCTA
CCACCGAGAAGTCGAAAAACTCTTCAGCAACTCAATCAGAGCGAAGGGAAAGGCAAAAAGCGGAAAAAAGTACAAGATGA
CAGTGAGGATGGCGAGGAATCGGGTAGCGAAGCGGAAGGAAGCGACGATGATAGGCCTAAAAAAAGAGGTAGACCGAGAG
TTACGCCGCGCGAGAATATCAAGAGTTTTACTGATATTGAGATACGACGGTTCATCAAGAGTTATAAAAAGTTCCCAGCG
CCTTTAAAACGATTAGAAGATATCGCAGCTGACGCTGATTTACAAGAAAAACCGATGACAGAATTGCGCTTCTTGGGCGA
GCAATTGATGTCTAGATGCGACGCATGTTTAGTAGAATTTGAGAATACCGCGAAAGAAAATAAAGGTGGCGAGGAAGAAG
GCAAAGGACCAGGTCGTAAAAGAGGTCGAGGACCCACTTTTAAGATAGGTGGTGTAATGGTGAATGCAAAGTCATTCTCA
GCCGCTGTTAAAGAACTCGAGCCTTTAGAACAAGCTTTGCCATCTGATCCCGAACAACGTGCTAATTGGCATCTCGATAT
TAAATTGAAACCAGCTAATTTCGAATGCGAATGGACTTCTGAGGATGATGTTAGACTATTAAAGGGTATATATCAGCATG
GCATGGGTTCATGGGAGGCGATAAAAACAGATACTAGTTTGAAACTCGGCGATAAGATTTTTCCCAATGGCAATAAAGTA
CAACTCAAACGTGTGAATGCACGTGCGGAATATCTCTTGAAGATTTTGAAGAAACAAATTGATCTTAAGTTAGGAGTGGA
TTATTTCTTTCTCCTTCAATTAGAAACTGAATACAAGACGCGAATGAGGAAACCGAGAAAGCCCAAAGAGGTGAAAGCAA
TTACCAAAGAAATTGTAGAAGATAACGATAGCTCTGGTGACGAAAATAAAAAATCAAAATCCAAAATTGACAAATCTTCA
ATTAAAAAAGAAGATGAAAACGTTACAAAAAAAGATATCAAAGAAGAAATCGATGATGTACCTGATGAAAAGAAAAAAGA
TAAAAAAGTTAAGAAGGAGAAAAAAGATAACAAAAAGGTGAAAAAGAATAAGCAAGCCGCAGGTCCTATGCATTTTACTG
CAAATAATGAACCAAGAGCTGTCGATGTAATTGGTGAATTAGATCCGCCAGTATTTGATGAGTGCAAAGAAAAGATGAGA
CCAGTAAAGAAGGCATTAAAGGCCTTAGATACACCAGATATGTCTCTGAGCGAAGAAGAGCGAGTTGCTCGCGCACGTCG
AAGTCTTTATCAAATTGGGAACCATATCGACACATGTCTGGCGGAATATAAAACCCCTGAACAAAGCAAAGAATGGAAAA
GTAATCTTTGGTATTTTGCTTCCAAGTTTACGACCTTCAAAGCGAAAAAGCTTTACAGAATGTATAAGAATCTAGTAAAA
AAGAAGGATGGCGACAGCAATGGCGGTGCCACATCTAGTCCTGATAAAAAAGAGGATACTTCTAATACTATAAAGAAACA
CAATGAAAAGGTATCTCACGAGAAACATTTCGATAAGCAACAGGCAGACAGCAGTAATAAAGATAGCAGAATAATGAAAC
GTAAAATTGATGATATCGAAGAAAACTCGAATAGCAGTACGCAAAGTAAGAAACATCTTTCAACTATTTCCGCTGTCAGC
AGCAATATCAGCAGCACATCCACAGTTACTATCGGTGCTATTACGATTACGCCTATAACGTCAACGCCAAATTCCACATC
GAATACCACTAACAGCGCAGACACATCGCGACATAAAGAGCAAAAAGAGTCGAAGCATAAAGATATGAAAAGAGATAGAG
ATCGTGACAGAGATAGAGATAGGGGGCACGACAGAGGTGATAGATTAAGTATGAACAAGGATGATAGAATTAGGAGAGAC
AGTGGATATAATATGGGACATTATAGTGGTAGTAGGGAAGATGATCATTGGTTATCCAGAGATGGAAGAGATATGAGAGA
CAGCAGATTCGGAGATCATAAGCGCGATCGCTTCGATCTTTATGGTCGCATGTCGGGTGGTTATCACAGGGACAGAGACA
GAGATCGAGATCGTGGTATGCACATGAATGATAAAAGAAGTGATTATTATCGATACTCGTCGGGACCACCGAGTTACGGA
TATGGGCCAGGTAGTTATGGAAGTAGCAGCGGTGGTGGTGGTGGTTATCCGCCCACGGATATTGCATCAAGTCATTTCAG
AAGTCGTGGTTATGCAGGAGATGGTTACTCCAATGATTGGCGGCCGAACAAAGATTACAGGCGGGACTACGATAGAAGAC
CACCGCCACCAAATGCCAACTCCTAG
PEP:
>AECH17854-PA
MIDFQKTFESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSGSGSGSDSEKSEKSDAPAAQSDSFQSKGS
NHSTEAKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRLATNRESDSDGRKKFKKKSSHNSWNSESSDSESDETENRRP
PPSKSLNRRAAQKAKEKARVRKKRISDSSDNSSFDSDDNRRQINRRAGTAVSYKEQSEEGTDSEDLVEVDESTAASTEPD
NAETIEQILGQRMGKKGVTGNITTIYAVEDNGDPNPQDLSNLETEVQYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLD
NFIKRERVIEYTREHAEPEELDYLECQLELKQDLLKSYNNVERIIADYKKPDSVYPDYFCKWENLSYAEATWEDGILIVK
KWPEKIKEFCDREDSKRTPSKHCKVLKSRPKFYQLNEQPTYMGKEKDLILRDYQMDGLNWLIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLGDINSRNVIREYEWCYQDSKRLKFNVILT
TYEIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALTEFHTNHRLLITGTPLQNSLKELWALLHFIMPSKFASWEEF
EKQHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYEALRKGVKGSTTTFLNI
VIELKKCCNHAFLTKPMDAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVRMLDILGEYLQRRHFPF
QRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYR
LVTKKSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDI
DEILRRAETRDEGPTTVGDELLSAFKVASFKTAFEEDLEPINQPNDNDDESKDWAEIIPENFRRKIEEEEKSKEMEDLYL
PPRSRKTLQQLNQSEGKGKKRKKVQDDSEDGEESGSEAEGSDDDRPKKRGRPRVTPRENIKSFTDIEIRRFIKSYKKFPA
PLKRLEDIAADADLQEKPMTELRFLGEQLMSRCDACLVEFENTAKENKGGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFS
AAVKELEPLEQALPSDPEQRANWHLDIKLKPANFECEWTSEDDVRLLKGIYQHGMGSWEAIKTDTSLKLGDKIFPNGNKV
QLKRVNARAEYLLKILKKQIDLKLGVDYFFLLQLETEYKTRMRKPRKPKEVKAITKEIVEDNDSSGDENKKSKSKIDKSS
IKKEDENVTKKDIKEEIDDVPDEKKKDKKVKKEKKDNKKVKKNKQAAGPMHFTANNEPRAVDVIGELDPPVFDECKEKMR
PVKKALKALDTPDMSLSEEERVARARRSLYQIGNHIDTCLAEYKTPEQSKEWKSNLWYFASKFTTFKAKKLYRMYKNLVK
KKDGDSNGGATSSPDKKEDTSNTIKKHNEKVSHEKHFDKQQADSSNKDSRIMKRKIDDIEENSNSSTQSKKHLSTISAVS
SNISSTSTVTIGAITITPITSTPNSTSNTTNSADTSRHKEQKESKHKDMKRDRDRDRDRDRGHDRGDRLSMNKDDRIRRD
SGYNMGHYSGSREDDHWLSRDGRDMRDSRFGDHKRDRFDLYGRMSGGYHRDRDRDRDRGMHMNDKRSDYYRYSSGPPSYG
YGPGSYGSSSGGGGGYPPTDIASSHFRSRGYAGDGYSNDWRPNKDYRRDYDRRPPPPNANS
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF13907  DUF4208; Domain of unknown function (DUF4208)     
SMARTSM00487     
ProSiteProfilesPS50013  CHROMO_2; Chromo and chromo shadow domain profile.     
CoilsCoil
ProSitePatternsPS00690  DEAH_ATP_HELICASE; DEAH-box subfamily ATP-dependent helicases signature.     

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