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Gene detail [Fasta]

Species Acromyrmex echinatior
GeneAECH13900
Positionscaffold220:1797047..1832527[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/aech_20/?name=AECH13900
sequence mRNA:
>AECH13900-RA
ATGGCGGAGGTGGCAACAAAGAAGTCGATCAATGTAGTAAGTAGCAAGAAGAACGAGGTGTGCGGTGTTCAATCTAACAA
TGGTTTGATTGATTTGGATGATCTAACCACGAGTAACACTCAACTAATTTCATTGTGCGACGATGACGATCTCGTACTCA
CAAACAATACACGTAACGAGCTTGAGAACGACGACAAGAGTCTGCAGGAGCTGATAGAGAGTGAACTGGCCCTGAGGATC
TGCTCGAGTAAAGAGGACGACGATGATGCCGTCATCGAAGAAACCGAAAATGTCATCTCTCAACCAGAGACAATCAAGAA
AATCGTTCTGGACTGTCGACAGGATCCCGTTGATGTTAATGCAGAGTTCATAGCTGCCGAGAGCGGACACTATTCTTTAG
TCGAGGAACCATATGGTCATCGGAATGGTCACGTGTCCCCACAGGTTAACATTGAAGTTGTAAAACCAGAACCAGTACGT
TTCCATGATGAAGAAGAAGATCAGGCGTTTGTCGAGCAGCCGGAAGCTGGTGTTCCGCCGGTAATTATTCAGAAAACAAA
CGAAGGTGATCAAGAGTCAAACCACGACGAAGCTGTCGATGTTAGCAGCAACAGTGAGGAGTGTCAGGCGATTGTCAAGG
AAGCTGTTCCTCCCTCGGATGATACAAACTCTAGCAATGTCACAAATGATTTCGTAGATGAATCGAACTCCCAGTCTTTC
CCGATTTCTGCCAGTTGTCCCGTAGATAAATACCAATGGAAGGAAGAATTGGTGCTGAAGACACTCGATGACGTAGATCT
CCTTTGCACCGACGTCGAACAGGAAAGAAAGAATGCAGATATTGATATTCCGGATTCCATGTTGTATGACCCGACGACAC
TTCTATTTGGCATGACGGTCGGTCGGTTCCATAACTTTGATGAGGAAATCTATCTACACAATCCAAACCTTGTTGAAGAA
GTGAAAATCCCTTGGATGAATAAAGAGTCTTCCACGAATGAACATATCGATACGCTTAATGATTCCTATGCAAACAATTC
TGTCGAGGAGGAAGAGAAGATTCCCACATCGCCGATCCGTCGGGATAAATCGTCAATCTCCGAAACGATCCAAGAGGTCG
ATTTGAAACTGGAGGATTCTCGTTTCTCCGACGATGTCTGCCAGTCCGAGATGTCCGCGGAGATGGCCAGCACGCAGGAA
TTCCTCGACATAGAACGCCGTGTGCTAAACGAAGAGATCGATCAGGAACCACCGCAGATTGTGATATCGTCAGAGATCGC
CGAATCTCAGGCGACGTCGGGATCGATTCTGGAAAATGAATCGCCAGAGTGTCTCGTTGCGGAAGATACGCAAAATCTGG
TAGACGAATCCTCGAGCGAGTTCTCGGCGTCAGACTCGACTTTTATTGAAAAAACCGAGATTGTAGTGTCTGACACGAGA
GTGATGATCTTTTCGGAAACGAGACAACTCGTCGCCGAGCAGATCGGGAATCTCGACTCGTGGACCACAGTCGAGGAGGC
CACAAAATCGGCAGACGCCGAAGAACTACAGAAGGACGCGCCAGCCGCGACGGAACGTGACGCGGTTAATGACGCGACGA
GGGACGATAATGAAGGGAAGCAAGACGATTACCTTGCACCCTCGTCTCCCCGTGCGCCCCTGGCCACACCGGACGAGACG
GAGACGAGCGATGTTTCTAACGCCTGTGACAGCGAAAGTCGCGAGGAAACGGTGACCACGAGTTCCACCGTAGTGACCTC
CTCGAAAGGTGGGACCAAAACGAAGAAGAAGAAGATCGAGGGCGTTGCTGGTAACGATGCCACCTCGCCGAACCTTACGC
CGCGCACAAAGAAAACCAAGAAGAGCAAGAAGAGCGATCTCGAGAAGGAGAACATCTCCGTGAACTGTAGCTTACAAGAC
GCAAGCATGCATACGGGCACTCAGCGATCGCATTCGGAGATGATCGATTTTTCCGCCAAGGACGATTTATCGAACGTCAA
TGTTAAGTCACTGACACAGAACTATGTCTCGGAAACGAGTCGTAGTGATCAGGAGAAGTTGTGCAGGGAGCGGATAGCGA
CTGGCGTGTCCATCAAGCAATTATGTCGCAGCTTTGGCGACATCTCGAACATGAGTGACGGCGATCAGGCAACTTTTGGG
AAAGCGAACCATACGATGGAAATTGAAGAGAAGGCGAGGTCTATGGGTGATCTGAGAGTATGCGAGCAGGGTTACTCGCG
GTTTACCAGAGACGCACCCGTCTTCGCCAGGGTGTCGGTCAAGGCCCTCAGGGCTTCCTATTGTAGTTTGGCAAGTTTAA
CGAACGAGGGTAAGGACAAGGATCGAGCATGCGAGAAGCCGAAGCTCGAGGCTCTTAGCAAGAAAGTCCTTCATGTGCGT
TCGGTTGATGCGGGGAAAGTCCAACAGCAGTTGAATGCAGTGGGTCAGAATGCCGATGCGAATACGAACTGTCGCAGCTG
TGGCAAGGTCGTGTTCCAAATGGAGCAGACAAAGGCCGAGGGTCTGGTCTGGCACAAGAATTGCTTCCGGTGCGTGCAAT
GCAGTAAGCAGCTCAATGTGGACAATTATGAGAGCCACGAGAGTAAGCTCTACTGTAAGCCACACTTCAAGGAACTCTTC
CAACCGAAACCGGTCGAGGAGTCCGACCAACCTGTGCGACCTCGAAAGCCGGAGCTGATCATACGGGAGAACGAGCCGAA
AGAATTGCCGCCCGATGTGGTCAGAGCTTCCGACAAACCTGATCTGGGACTCGAGGAACTTTCAAGCTTAAACGTCAAGT
CGCGCTTCCAAGTCTTTGAGAAAGCTAGTACGGAGAACACCAATGAGATCGAACGATCACCATCACAAATCGCCGTCAAG
AGATCACCCAGCATCCTTAGCAAACTGGCCAAATTTCAAGCGAAAGGCATGGACATTGGCGTGGCAGACGAATCTCTCAA
TGGTATACCTTATGAAGAGTCCAGCGAAAGTGAGGATGAAGTAGAGGCAGAAGAAACCGAAGAAGTGGAATCCGAAATCG
TGAAGTCAAAACGCACTACACGCGAACGACCGATCAGCTTTTCGAAGATGGACGACATCAAAAATCGTTGGGAGAGCACC
AGCCAGCAGGGAAGACGCGAGGTTCAGCGCGAGGCTAGGAAGGAAGAAATCGCAGGAATCCGTTCGCGATTGTTCTTGGG
TAAACAGGGTAAGATGAAGGAAATGTATCAACAGGCAGTAGCTGGAAGCGACCGTGTTACGAAGATAAACGCAGCAGAGG
AGATTCAGCACTCGACTACCCACGCTCGTTCCCTCAAAGAGAGATTTGAACGGGGCGAGCCAATCGCAGCGTCAGACGAC
GAAACTGATAGTAAACTGAAACCGGAGAAAGCCGACGAGGAGGTGATCGCAGCAGCAAAAACAGGACGCCCAGTGACGCC
AGTTCATCCAAAAACGCCAACCGAAACTTCACGACGTGCACGAGATGCCTTCATGGGTCGTCAAGTCTCAGACGATGTGG
TGCGCAGCTCAGATGCGACCGAGGAGATCCAAGTAGAAACGTCGGAAATTTCGAACAAGTTCAAATTCTTCGAGTCCTAT
AAGGAACCGGAGAAACAGCGGAAGCAATTTCGCATTACGCCGCCTCGAGACGGTCAAGTCAAGATGGATTCACCGGATCG
CGAGATTTACCGCGATCCAGATGTAGTCAGAGCCGACGACAGGGTGGACGAAGTGGTGCGCACAGACACAGCGAGGAAGA
TGCTGTCCATCTTTCGGCAGATGGAAGAGAACGCGTGCAAGGAAGAACTGCCGGAGGGTCCGAAGCCCTTGAAACGTTTC
ACACCGCCTCCTGAGGATAAATTCGCCAAAGCAACGGCCTCGGACTCGGAGGAAGGCGAGGATGAAGAGGGCGAGGAAAC
CGACGGTGATGAAAGCGCTGAGGAGAGAGATCCTAACTACGTCCGTGCTTCCGATAAGGTGGAGGACGAATTCTTGAAAC
AAGCGCAGAATGCGGCGCGCGCCAAGACTCTACGTGCTAAGTTCGAGCATTGGGAGGAGACCGACGGCAAGATCAGCAAT
CACCATGTCGCCGAAATGGAGATGGCCCAAGGTACAGGCGAGCAGTCCAGCATAGAATCGGCGAGCAGTCTTAGAGCCCG
TTTCGAATCTCTCGGCTCGCAGGCTAACGAGTCCCCGCGCACACCGAAGGTTAAAGTCAATCGATTTGTGGAGATCCAGA
CAACATGCACGGAGGTGTGCGAGAGCTGCGAGAAAAAGGTCTACCCCTTGGAGAAGGTCGAGACAAATAACAAAATCTTC
CATAAGCAATGCTTCCGGTGTCTGCAGTGCAATTGCATTTTAAGGATGGACTCCTTCACTCTGAATAACGGCAAGCTGTA
CTGTATCCCGCACTTCAAACAACTTTTTATTACACGGGGAAACTATGACGAGGGCTTCGGTGTCGACCCGCACAAGAATA
AATGGGCGACAACGAACTCCAGCAATTCCACGAGCCCATCACCAATCGCGGTCTCGAACGGCGATCTCTGA
PEP:
>AECH13900-PA
MAEVATKKSINVVSSKKNEVCGVQSNNGLIDLDDLTTSNTQLISLCDDDDLVLTNNTRNELENDDKSLQELIESELALRI
CSSKEDDDDAVIEETENVISQPETIKKIVLDCRQDPVDVNAEFIAAESGHYSLVEEPYGHRNGHVSPQVNIEVVKPEPVR
FHDEEEDQAFVEQPEAGVPPVIIQKTNEGDQESNHDEAVDVSSNSEECQAIVKEAVPPSDDTNSSNVTNDFVDESNSQSF
PISASCPVDKYQWKEELVLKTLDDVDLLCTDVEQERKNADIDIPDSMLYDPTTLLFGMTVGRFHNFDEEIYLHNPNLVEE
VKIPWMNKESSTNEHIDTLNDSYANNSVEEEEKIPTSPIRRDKSSISETIQEVDLKLEDSRFSDDVCQSEMSAEMASTQE
FLDIERRVLNEEIDQEPPQIVISSEIAESQATSGSILENESPECLVAEDTQNLVDESSSEFSASDSTFIEKTEIVVSDTR
VMIFSETRQLVAEQIGNLDSWTTVEEATKSADAEELQKDAPAATERDAVNDATRDDNEGKQDDYLAPSSPRAPLATPDET
ETSDVSNACDSESREETVTTSSTVVTSSKGGTKTKKKKIEGVAGNDATSPNLTPRTKKTKKSKKSDLEKENISVNCSLQD
ASMHTGTQRSHSEMIDFSAKDDLSNVNVKSLTQNYVSETSRSDQEKLCRERIATGVSIKQLCRSFGDISNMSDGDQATFG
KANHTMEIEEKARSMGDLRVCEQGYSRFTRDAPVFARVSVKALRASYCSLASLTNEGKDKDRACEKPKLEALSKKVLHVR
SVDAGKVQQQLNAVGQNADANTNCRSCGKVVFQMEQTKAEGLVWHKNCFRCVQCSKQLNVDNYESHESKLYCKPHFKELF
QPKPVEESDQPVRPRKPELIIRENEPKELPPDVVRASDKPDLGLEELSSLNVKSRFQVFEKASTENTNEIERSPSQIAVK
RSPSILSKLAKFQAKGMDIGVADESLNGIPYEESSESEDEVEAEETEEVESEIVKSKRTTRERPISFSKMDDIKNRWEST
SQQGRREVQREARKEEIAGIRSRLFLGKQGKMKEMYQQAVAGSDRVTKINAAEEIQHSTTHARSLKERFERGEPIAASDD
ETDSKLKPEKADEEVIAAAKTGRPVTPVHPKTPTETSRRARDAFMGRQVSDDVVRSSDATEEIQVETSEISNKFKFFESY
KEPEKQRKQFRITPPRDGQVKMDSPDREIYRDPDVVRADDRVDEVVRTDTARKMLSIFRQMEENACKEELPEGPKPLKRF
TPPPEDKFAKATASDSEEGEDEEGEETDGDESAEERDPNYVRASDKVEDEFLKQAQNAARAKTLRAKFEHWEETDGKISN
HHVAEMEMAQGTGEQSSIESASSLRARFESLGSQANESPRTPKVKVNRFVEIQTTCTEVCESCEKKVYPLEKVETNNKIF
HKQCFRCLQCNCILRMDSFTLNNGKLYCIPHFKQLFITRGNYDEGFGVDPHKNKWATTNSSNSTSPSPIAVSNGDL
Swiss-ProtLIM domain and actin-binding protein 1
SUPERFAMILYSSF57716  Glucocorticoid receptor-like (DNA-binding domain) superfamily     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
ProSitePatternsPS00478  LIM_DOMAIN_1; LIM zinc-binding domain signature.     

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