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Gene detail [Fasta]

Species Acromyrmex echinatior
GeneAECH12801
Positionscaffold135:804283..815787[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/aech_20/?name=AECH12801
sequence mRNA:
>AECH12801-RA
ATGGACGAGACTGGAGGACAAGTATCAAATGTTGGCCAGCAAGTAGATGGATCATCTGAGGCTGAAGAATCTCAAAGACT
AGAAGAAGATGATGATTATGAACCAGAAGAGCGAAAAAAGAAGAAGGGGAAAAAGCGAAAAGCACGTAGTGAGGATAAAA
AAGGAAAGAAAAAGAAGAAAAAGAAAAAATCTGATTCTGGAGATGAAAGTGATTTCGGTGGCGGTGAAGCGGGTGACGCG
GCTGGTGAAGATAGCGACTATGCAGTCAATAGAAAAAGCAGAAAATCATCGTCTAGAAAATCTTCCAGCCATAATACATC
GACCACTCAGAGTCAAGAACCTACAACAGGCATGCCCACGATCGAAGAAGTGTGCAATACATTTGGTTTAACAGATGTAC
AAATTGAATATTCCGATGCCGATTTCCAAAATTTAACGACATACAAACTGTTTCAACAGCATGTCAGACCGCTCTTGGCA
AAAGAAAATCCGAAAGTTCCAATGTCAAAACTTATGATGTTGGTGGCAGCCAAGTGGCGCGATTTCTCTGAATTAAATCC
ACATACGCAACCAGATGCAGATGTGTCATCCACAAATGTAGATGATGATAGTAGAAACGCTAGAACTAATCGAAGTGGTG
CTATGCAAGAAGCCGAAGAGGAGGAGGAAGATGACGAGGACAGTGACAGAAAGAGAAAATCACGAGGTTCGAGAGCGAAA
AAAGGGAAAAAGGCGTCGAAAGTACCAACGCTTAAGATTAAGCTTGGGAAACGTAAACGAGGCAGTTCGGACGAAGAAGC
AGAAGGTAGTGCTGCTGGTTCCGCGGCGGATTCAGACATGGAGTTCGAGCAAATGTTAGCTGATGCGGAAGAAACTCCGG
GTGCTGAACCGCCAGTTCGCAGAAAGGCGAAAACCAAAATCGGCAACAAGACTAAGAAAAAGAAGAAGACAAAGACAACT
TCCAAGTTCCCGGATGGAGAGGAAGGTCTCCAGACTGACCACCAGGATTATTGTGAAGTATGTCAACAAGGCGGCGAAAT
TATATTGTGCGATACATGTCCCAGAGCATACCATTTAGTGTGCTTAGAGCCCGAAATGGAAGAAACACCAGAAGGAAAAT
GGAGTTGTGCTCATTGCGAAGGAGAAGTGGCAAAAATATTAACTTGGAGATGGAAAGAGAGCTCAGATACTCCATCGGAG
GAACCCTCCACGAGCAAGGCTGCACCTAAGCAAAGAAAAATGCGTGAATTCTTTGTTAAATGGGCCGATATGTCTTATTG
GCATTGCGATTGGATAACAGAATTACAACTTGACGTTTTTCATCCTCTTATGTACAGGAATTATTATCGTAAATATGACA
TGGATGAACCACCGAAGTTGGAGGAACCGTTGGATGAAAGTGATTCTCGTGTGAAGCGTTTGAAAGAACAAGACGGTGCC
ACTAACAGGGATGAGTACAATTTGGAAGAACGTTTCTATCGTTATGGTGTGCGTCCAGAGTGGCTGGGAGTTCACAGGGG
GATCAATCATCGATTGCAAAGAGATGGCAGGGCTACGTATCTCGTGAAATGGAGAGAACTCGGTTACGACCAGGCAACGT
GGGAAAATGAACATGAGGACATCCCTGGCTTGAAACAAGCCATAGAATACTATCTAGATCTCAGAGCCGCCAATTGTTGT
GATGTTAGTTCGTCACGTAAAGGGAAAAAAGGTAAAGGCAAGAAATCAAAAACACGCGAGTTGATTGATGATGAAGAAAG
GACTCCGAAACGATACACACCACCGCCAGATAAACCTACAACGGATCTCAAAAAGAAGTACGAAAGACAGCCAGAGTATT
TGGATCAGACTGGAATGCAATTGCATCATTATCAATTAGAGGGTCTAAATTGGTTGAGATATTCATGGGGTCAAGGCATA
GATACGATTTTGGCCGATGAGATGGGTTTGGGAAAAACTATTCAAACCATAACATTCTTATATTCCTTGTACAAAGAAGG
CCATTGTAAAGGGCCCTTTTTAGTCTCTGTTCCCTTGTCTACTATCATTAATTGGGAACGTGAATTCGAGACTTGGGCAC
CTGACTTTTATTGTGTTACTTATGTGGGTGACAAAGATAGCCGTATCGTGATTCGTGAAAATGAATTGTCATTTGAAGAA
GGTGCTGTGCGTAGTGGACGCGCCTCTAAAATCCGATCGTCTTCGATTAAATTTAACGTCTTGCTTACAAGTTATGAACT
AATTTCCATAGATTCAGCGTGTTTAGGGTCCATTGATTGGGCTGTTTTAGTCGTGGATGAAGCTCACAGATTGAAGTCTA
ATCAATCAAAATTCTTTAGATTACTAGCTTCCTACAATATTGCGTATAAACTTTTGCTGACTGGTACCCCACTACAAAAT
AATTTGGAAGAATTGTTCCATTTATTGAATTTCTTATGCCGTGACAAATTCAATGATTTAGCAGCGTTCCAAAATGAATT
CGCAGATATTTCAAAGGAAGAACAAGTTAAGAAGCTACATGAAATGCTTGGTCCACATATGTTGCGGAGATTGAAAGCTG
ATGTATTGAAGAACATGCCTAGCAAATCTGAATTTATTGTTCGTGTCGAATTATCGCCGATGCAGAAAAAATATTACAAA
TACATTTTAACGAGGAACTTTGAAGCTCTCAATCCAAAAGGAGGTGGTCAGCAAGTATCATTGTTAAATATAATGATGGA
TCTCAAGAAATGCTGCAATCACCCATACTTGTTTCCCGCTGCATCACAAGAAGCACCGACTGGACCAAACGGAAGTTATG
AGACATCGGCTCTAATTAAAGCAGCTGGTAAATTGGTTCTCTTGAGTAAAATGCTGAAGAAACTGCGAGATGATGGACAT
CGAGTTCTTATATTCTCTCAAATGACTAAGATGTTAGATATCCTTGAAGATTATTTGGAGGGTGAGGGATACAAATATGA
AAGAATAGATGGTGCACAACAGTTTGTCTTCTTACTTTCTACGCGCGCTGGTGGTTTAGGTATTAACTTAGCAACGGCAG
ATACTGTGATTATTTACGATTCCGATTGGAATCCACACAACGATATCCAAGCGTTCAGCAGAGCTCATAGGATAGGCCAG
GCCAACAAAGTTATGATCTACCGATTTGTCACACGTAATTCTGTGGAAGAAAGAGTAACACAAGTAGCTAAGCGCAAGAT
GATGCTCACTCATTTGGTTGTGCGACCAGGCATGGGCGGCAAAGGCGCCAATTTTAGTAAACAAGAGCTTGATGATATTT
TACGTTTTGGTACGGAGGAATTATTCAAGGAAGAAGAGGGTAAAGAAGATGAAGCTATACATTACGACGACAAGGCTGTC
GCCGAATTATTGGACAGAAGTAAAGAGGGTATCGAGCAGAAGGAGAATTGGGCTAACGAGTACTTAAGTTCCTTCAAAGT
TGCCTCGTACGTAACAAAGGAAGGTGAAACAGAGGAAGAAGCAGATACAGAAATAATTAAGCAAGAAGCGGAAAATACAG
ATCCAGCATATTGGATCAAGCTGCTTAGACACCATTACGAGCAGCAACAAGAAGATATCGCTAGAACACTTGGAAAAGGC
AAACGAGTACGTAAACAAGTTAATTACACGGATGGTGGTGTAACCGGCGACCAAGGCGCAAGAGATGATCAACCATGGCA
GGAGAATCTGTCGGATTATAATAGTGACTTTAGCGCGCCCAGTGATGACGATAAGGAGGATGATGACTTTGATGAGAAGG
GTGAAGGAGACTTGTTATCTCGCAGAAGCAGACGAAGATTGGAGAGACGCGATGAAAAGGACAGACCTCTGCCACCACTA
CTTGCCAGAGTAAATGGAAATATCGAGGTACTAGGTTTTAATGCTAGGCAACGGAAAGCATTCCTCAATGCAATTATGCG
TTATGGAATGCCGCCTCAAGATGCTTTCAACTCTCAATGGCAAGTCAATGGCGTTTTGTTGGTGCGCGACCTGCGTGGCA
AATCTGAGAAGAATTTCAAAGCCTATGTTTCTCTTTTTATGAGACACCTTTGCGAACCAGGTGCTGACAATGCAGACACG
TTCGCTGATGGTGTTCCACGAGAAGGTCTCAGTCGACAGCATGTATTAACGAGAATCGGCGTTATGTCCTTGATTAGAAA
GAAGGTACAGGAATTTGAGCACATTAATGGCTATTATTCAATGCCGGAGATGATACGTAAACCAGTAGAACCTGTCAAAG
TCGGAGAAGGAGTTGGAGATGCAGCGACAGGTACTAGTAGCACTAGTGCTACTCCAGCCACTTCGAATGCTCCTAGCCCT
AGCCCCGCTGCCACACCAACTCCGACTTCTGGTACAAGCAACGAGACTAATAAAGTGAATTCTGATTCATCTGAAGTTAA
GGAATGTAAGGATGAATCAAAAGATAAAGAGAGTGGTGATGCAAAAGATTCAAAGGAAGATTCGAAAATTTCTAAAGAGG
AGGAGGAACCAAGTTCCGAGAAAGACAAGGAAAAGGAGGAAAAAAAAGAAGAAAAAGACACTGAAACGGAGAGCACAGAC
AAGGAGAAAGACAAATCTGAGATAAAAGAGGAGAAAACTGTATCGAAACATGATGATAAAGTGGAGAATAATGAGATTAA
GAAATCCGAACCGGAAGAAGATGTTGTTATCGTTAAAGATGATGAAGAAGAAGTTGAAAAACGAGAAGAGAAGGATAACA
AAGAAAAGGATGTAAAGGACTGTGATCAAGAAGTGATGAAACCTAAACGTAAATTTATGTTTAACATAGCTGATGGTGGT
TTTACAGAATTGCACACGCTTTGGCTGAATGAAGAAAAGGCAGCGGCGCCTGGTCGCGAATACGATATTTGGCATCGTCG
ACACGATTACTGGCTTTTGGCGGGTATTGTCACACATGGTTATGGGCGTTGGCAAGATATTCAAAACGATATTCGATTCG
CAATTATCAACGAACCATTCAAGATGGACATGGGAAAAGGTAACTTTTTGGAGATCAAGAACAAGTTTTTGGCAAGGCGT
TTTAAACTCTTAGAGCAAGCTTTGGTAATTGAAGAACAGTTGAGGCGAGCTGCCTACTTGAATCTCACACAAGATCCTAA
TCATCCTGCTATGAGTCTTAATGCGCGATTTGCTGAAGTTGAATGTCTTGCTGAATCCCATCAACATCTTAGCAAGGAAA
GTCTCGCCGGTAATAAACCGGCGAACGCTGTGTTACATAAGGTATTGAACCAATTGGAAGAATTGTTGTCTGATATGAAA
TCAGACGTAAGTCGTTTACCAGCAACTCTGGCTCGTATCCCACCAGTCGCTCAGAGACTTCAAATGTCTGAGAGGTCAAT
ATTAAGTCGTTTGGCGGCCACGGCACCCGGTGCCACTAGTTCTCAAACAGGACAGGCTGCATTACTGGCTCAACAATTCC
CGGCTGGTTTCTCCGGAGGACAGTTGCCAGCCACTTTCGCAGGTGCTGTTAATTTCGGGAATTTTAGACCACAATACTCA
GTTCCGGGGCAACCACCGCAAGGCTTTACAGGTTCGTGA
PEP:
>AECH12801-PA
MDETGGQVSNVGQQVDGSSEAEESQRLEEDDDYEPEERKKKKGKKRKARSEDKKGKKKKKKKKSDSGDESDFGGGEAGDA
AGEDSDYAVNRKSRKSSSRKSSSHNTSTTQSQEPTTGMPTIEEVCNTFGLTDVQIEYSDADFQNLTTYKLFQQHVRPLLA
KENPKVPMSKLMMLVAAKWRDFSELNPHTQPDADVSSTNVDDDSRNARTNRSGAMQEAEEEEEDDEDSDRKRKSRGSRAK
KGKKASKVPTLKIKLGKRKRGSSDEEAEGSAAGSAADSDMEFEQMLADAEETPGAEPPVRRKAKTKIGNKTKKKKKTKTT
SKFPDGEEGLQTDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPEMEETPEGKWSCAHCEGEVAKILTWRWKESSDTPSE
EPSTSKAAPKQRKMREFFVKWADMSYWHCDWITELQLDVFHPLMYRNYYRKYDMDEPPKLEEPLDESDSRVKRLKEQDGA
TNRDEYNLEERFYRYGVRPEWLGVHRGINHRLQRDGRATYLVKWRELGYDQATWENEHEDIPGLKQAIEYYLDLRAANCC
DVSSSRKGKKGKGKKSKTRELIDDEERTPKRYTPPPDKPTTDLKKKYERQPEYLDQTGMQLHHYQLEGLNWLRYSWGQGI
DTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEE
GAVRSGRASKIRSSSIKFNVLLTSYELISIDSACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQN
NLEELFHLLNFLCRDKFNDLAAFQNEFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYK
YILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETSALIKAAGKLVLLSKMLKKLRDDGH
RVLIFSQMTKMLDILEDYLEGEGYKYERIDGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
ANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELDDILRFGTEELFKEEEGKEDEAIHYDDKAV
AELLDRSKEGIEQKENWANEYLSSFKVASYVTKEGETEEEADTEIIKQEAENTDPAYWIKLLRHHYEQQQEDIARTLGKG
KRVRKQVNYTDGGVTGDQGARDDQPWQENLSDYNSDFSAPSDDDKEDDDFDEKGEGDLLSRRSRRRLERRDEKDRPLPPL
LARVNGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFNSQWQVNGVLLVRDLRGKSEKNFKAYVSLFMRHLCEPGADNADT
FADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSMPEMIRKPVEPVKVGEGVGDAATGTSSTSATPATSNAPSP
SPAATPTPTSGTSNETNKVNSDSSEVKECKDESKDKESGDAKDSKEDSKISKEEEEPSSEKDKEKEEKKEEKDTETESTD
KEKDKSEIKEEKTVSKHDDKVENNEIKKSEPEEDVVIVKDDEEEVEKREEKDNKEKDVKDCDQEVMKPKRKFMFNIADGG
FTELHTLWLNEEKAAAPGREYDIWHRRHDYWLLAGIVTHGYGRWQDIQNDIRFAIINEPFKMDMGKGNFLEIKNKFLARR
FKLLEQALVIEEQLRRAAYLNLTQDPNHPAMSLNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMK
SDVSRLPATLARIPPVAQRLQMSERSILSRLAATAPGATSSQTGQAALLAQQFPAGFSGGQLPATFAGAVNFGNFRPQYS
VPGQPPQGFTGS
Swiss-ProtChromodomain-helicase-DNA-binding protein Mi-2 homolog
KEGG     K11643  CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00385  Chromo; Chromo (CHRromatin Organisation MOdifier) domain     
SMARTSM00487     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS01359  ZF_PHD_1; Zinc finger PHD-type signature.     

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