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Gene detail [Fasta]

Species Harpegnathos saltator
GeneHSAL19334
Positionscaffold668:303973..310709[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/hsal_33/?name=HSAL19334
sequence mRNA: 
>HSAL19334-RA
ATGGCCGAGCTTATAGCGATCCCGTTGAAGAAACCGTCGGACATTGACGTAATAAAACCTCTTACTAATATTATCAAATC
TACATATAATAGCCCAGGTAATCAAAAAGATTATACAGACGCTATCGCAGAATTCAGCAAGTTGAGAAACAACGCTTTGT
GGCGAGCTTTTGAGAAATATGAAAGTTCTTTGGAGGTTATCTACACCTATTATGATCAGTTATGCGCTCTGGAAGGAAAA
ATCCCTGCTCATGAATTGCAAATACCATTTAAATGGAAAGATGCTTTTGACCGTACCATTTTTGGGGGGAAACTTAGTTT
AACAATCAGTACATTGGCGTATGAAAAAGTATGTGTTCTTTTCAATATAGCTGCTTTACAAAGCTCAGTTGCTGCTATGC
AATCATTAGATAGCGATGAAGGATTAAAATTGGCAGCTAAATTGTTCCAGCAAGCGGCTAGTATATTTAATTTTTTAAAG
GGAAATGTTATGATAGCTATTCAACAAGAACCAACACCCGACATTAGTCCAGAAACGCTCGGGGCGTTAAGCGCCTTAAT
GCTCGCACAAGCACAAGAAATATTTGTGTATAAAGCAATTCATGATTCTATGAAAGATGGTATTGTCGCTAAACTAGCAG
CACAAACAGAAGAATTGTATGCGGTTGCTTTGAAGATGTTTCAAAAAGAGATTTTCCGTGCGTTTTGGGATAAAGAATGG
GTACCTTTGATAGCAGGTAAACAAGCTGGTTACCGTGCTATGGCTGAATATTATCAGTCGCTTGTATGCAAAAACAATAA
AATGATTGGAGAAGAAATTGCTAGATTAGAGCATGCTATGGAGTTATTCAAAGCTGCTCAACAAAGATCAAACAAGCCTA
ATTTGTTCCAAGACTGCGCTAATAAAACGCAAAGAAATTTAACGGAGGTGAAGAAAGATAATGATTTTATATATCACGAA
AGGATTCCAGACATCAAGAATTTGGAATCTATAGGAAAAGCTACCGTTGCTAAACTACTTCCGCTTCCTGAGACGTTCAG
TTCTAATTTTAAAGATCTTTTTGCGGAATTGCTGCCTGTTAGTATACACCATGCATTGTCAGCTTACGAAACTCGTCGCA
ATGAACTTGTCAATTATGAAGTTTCGAATTTACGGGAAATGACCCAACTTCTAAATAGTGTTTTGGCAAGTTTGAATCTA
CCAGCAGCTATTGAAGATACCAGTGGAACAGAAATACCTCAATCATTGTTAGAAAAAGCTCATTACGTACGAGACACAGG
TAGAATAAAAGGTTTAGAAGCATCCATGGAAGAGTTGCCAGACTTATTGCAACGTAATAAAGAACTTCTAGATGAGTCTG
AGAGAATGCTACAAGAAGAACGTGAATCTGATAACCAATTACGAGATCAATTCAAAGAACGTTGGAAGAGGATACCGAGT
GCCCGATTGACAGAACAGTTTACTGTCAATTTACAAAAATATCGCGAGATTATTAATAATGCAGTTGCTGCTGATAAAGT
AGTTCGTGAGAAATACGAAAATCACAAAGAAGGAATGGAATTTTTAAGTTTGGATGAGGATGAACTTACCAGAGCTGTTC
CGCAGGGTTCAGCTGTTCAAGAGAGTAATGTTGTTAAGCAACTTAGGAAATTAATGGAAGATGTAGCTGTTTTGAAAGCT
GAACGTGATACCATCGAAAGTGAATTTAAATCCGCTACCAATGATATGAAAAGTACATTCCTATCGGCCTTAGTCAAAGA
TGGTGCGATCGATGAACCGAATATATCTGTTGAGAATTTAGGGAAATGTTACGGGCCTTTGCAAAAACAAGTACGAGAGA
ATATAGCGCGCCAGGAAGAATTAGTTACTGAGATTCAGCGTTGCCATGCAGAATTTACAAACGAACAAGTCGGTGCTGGT
AGTTCACGGGAAACAATGCTCTGTAAACTAGCTTCTGCCCACGATGCATTTAAAGAACTCAAAAATAACTTAACAGAAGG
AGCTAAGTTTTATAATGATTTAACACAGTTATTGGTGGTTTTCCAAAACAAGATATCCGATTTTTGTTTCGCTCGAAAAA
CTGAAAAGGAGGAGTTACTAAAAGATTTAACGACAAATTTGAGCCATACTGGCCCTGCTACGACGCCGAACATTCCATCT
CATCATAGTGGTCCATCTGGCATGAGCCAAACAACGGATACTGCTTTATCATCGCAGCTACCTTATCCTGTGCAACAAGG
TGGTATGCCCATGCCTTATGGTGTTACACCAGCACCATACCCAGCATATGTGCCTCCACCTATGCCAGCAGCTTACAATC
CGTATGCTACGATACCGTATCCTACGCAAGGTATATAA
PEP: 
>HSAL19334-PA
MAELIAIPLKKPSDIDVIKPLTNIIKSTYNSPGNQKDYTDAIAEFSKLRNNALWRAFEKYESSLEVIYTYYDQLCALEGK
IPAHELQIPFKWKDAFDRTIFGGKLSLTISTLAYEKVCVLFNIAALQSSVAAMQSLDSDEGLKLAAKLFQQAASIFNFLK
GNVMIAIQQEPTPDISPETLGALSALMLAQAQEIFVYKAIHDSMKDGIVAKLAAQTEELYAVALKMFQKEIFRAFWDKEW
VPLIAGKQAGYRAMAEYYQSLVCKNNKMIGEEIARLEHAMELFKAAQQRSNKPNLFQDCANKTQRNLTEVKKDNDFIYHE
RIPDIKNLESIGKATVAKLLPLPETFSSNFKDLFAELLPVSIHHALSAYETRRNELVNYEVSNLREMTQLLNSVLASLNL
PAAIEDTSGTEIPQSLLEKAHYVRDTGRIKGLEASMEELPDLLQRNKELLDESERMLQEERESDNQLRDQFKERWKRIPS
ARLTEQFTVNLQKYREIINNAVAADKVVREKYENHKEGMEFLSLDEDELTRAVPQGSAVQESNVVKQLRKLMEDVAVLKA
ERDTIESEFKSATNDMKSTFLSALVKDGAIDEPNISVENLGKCYGPLQKQVRENIARQEELVTEIQRCHAEFTNEQVGAG
SSRETMLCKLASAHDAFKELKNNLTEGAKFYNDLTQLLVVFQNKISDFCFARKTEKEELLKDLTTNLSHTGPATTPNIPS
HHSGPSGMSQTTDTALSSQLPYPVQQGGMPMPYGVTPAPYPAYVPPPMPAAYNPYATIPYPTQGI
Swiss-ProtProgrammed cell death 6-interacting protein
KEGG     K12200  PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein     
Gene3DG3DSA:1.20.140.50     
PfamPF13949  ALIX_LYPXL_bnd; ALIX V-shaped domain binding to HIV      
SMARTSM01041     
ProSiteProfilesPS51180  BRO1; BRO1 domain profile.     
CoilsCoil

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