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Gene detail [Fasta]

Species Harpegnathos saltator
GeneHSAL18513
Positionscaffold545:178950..208114[GBrowse]
Ant Genomes Portalhttp://hymenopteragenome.org/cgi-bin/gb2/gbrowse/hsal_33/?name=HSAL18513
sequence mRNA:
>HSAL18513-RA
ATGCTTAGCGCCGCCGGTGTCTCGTCCTCCTACATGCCCGAGAAGTATCCCGTGGAAGTGTATCACATGCTGCAAGAAAG
AACGCAGTTCGGGATTGGGCGTGACAATAGAGTGAGGGGCACTTGGGGCACGTGGAGCGAGTGGAGCGAGTGTTCCAGAT
CCTGCGGCACCGGTATCCAGTCCCAATCTAGGGAATGCGTTCCCCTACGGAGGCTTTTGCGGCGACGGAGCATCATCTCG
GAGAACGGCACCAGCAGCGTCAGGCCCATTTGCATCGGCACGTACAGGCGCTACCACACGTGCAATACTCAGGAATGCCC
GAACTTCCCGGAAGACCCGCGGGCGGAACAGTGCGCCAAGTACAACAGGAGGAACTACAAGGGCCGCAGTTACGTCTGGG
TGCCCTTCGTAGACGCGCCGAACTCATGCGCGCTCAATTGCCGTGCAGTCGGCGAGCGTTTTTACGCAACGCTTGAACCG
GCAGTAATAGACGGCACGCCCTGCGACGCTCCGAATCTTCGCGGACGTGGCGGCGGCGGCGGCGGCGGCGGCAATGGTAT
CGGGATTTCGACGGAACGCAACGGCGAGCGGTGGCTATGCGTCGCCGGACAATGCAAGTCCGTAGGGTGCGACGGGGTGG
TGGGGTCCGACGCGACGATGGACGCCTGCGGCGTGTGCGGTGGCCAGGGCAGAGGTTGCAGATTGTACGAGGGTATCTTC
ATGGAGCCGATTCTGCCGAAGGGTCATCAGCAGGTGACCATGATTCCGAAGGGCGCCATGTCGCTCAACATTTCCGAGCT
ACGGTTCAGCAGTAATTTTCTAGCGTTGAGAGACAGTAACGGCAGTTACATCCTAAACGGACCGTGGTCTTACAGTCCCA
GTGGCACTTATAAAGCGGCTGGTACGACATTAACATACCAGAGGGGCGATAGGAACCGCATGGAGTGCATCTTGGCAACC
GGACCGTTGAATGAGTCTTTGCATCTAGAGATCTTATCGCTGGATCGAAATCCAGGCGTCCTCTACAAGTATATGTTGCC
CATGAGGGAAGTGCCGGACGGCAAAGCGATAATCGCACCGCCATTGCTCGTCGCCGGATCAAACGATCGGGGCAATGAAA
TACCTAGTCCGGAGAGCCACGTGACCATACGAGTGCCCATCACGAGAACATCGGATCGGCGGGGCGATTTATCTTCGACG
CGTCGCGATCGCGATCCCGCGCGCACGCAGCACGTCGGGCGGAAGGAAGAGATGAAGCATCCGCCGACCACGGTGATGGC
GGGCGATCAGCCAAAGTCAAAGGCGAGGAAGAAGAAGAGGAGGAAGTTCGCTTGGAAAATAGCCGACTTCGCTCCCTGCT
CGGAGGAATGCGGGGGAGGCGTGCGGACGGCGATCCTGAAGTGCATCCGCGAGGATAATCAGACGCTCGTCAACGAGAAA
CGCTGCCGCAACCTGGAAAGGCCGAAACATCCACCCCCGTTGCGATGCAACGACCATCCTTGCGTTCCCAGATGGCGAGC
CGAGCCGTGGAGCGAGTGCTCGGTCACCTGCGGGGCCGGCATCAGGACACGGAAGCTGGAGTGCGTCCAAAAGATGGAGG
GAAGGTTAATGCGCGTCGCAGCCAGCGCATGCGCTCAACCGCCGGATCTAAGGACCATGGAAGCTTGCAGCCTGTCAGCG
TGTCCTAACACGGGTCCAGAATTGAGGCATATGCATTCGCAGCACGACGCGCCCAGGTGGAACGTGGGTGCCTGGGGCCC
GTGCTCGACCACGTGTGGTCGCGGAATTCGAAATCGAACGGTCACTTGCATAACATCCGGAGAGTCTTGCTCGTTGCTCA
ACAAGCCCGAGTCCCAAAAACCGTGCGAGATAGCAGCCTGTAACATGGTGATGGACGCAAGACACCACGCGCCCTGGTTG
TACTCGGAGTGGTCTTCCAAGTGCTCGACGGAGTGCGGGAACGGCGTGAAGACCAGGCGAGTTGCGTGCGCCGACGGTAG
CGAATTATTTTGCAATCCCAAAGAGAGACCGGACATGGAGATGCGCTGTTTCGGACGAGGCACGAGCTGCGACAAAGCCA
AGTGGTTCACCGGCCCGTGGACTTCCTGCTCTGTCTCGTGCGGCGTCGGCGTGCAGCGTCGCAGCGCCGTTTGCCTGTCC
AGGACGAATGACGAGTTTGCTGTGTTACCGGCGAAAAACTGCAACGAGCCGAAGCCGGCGAGCGAACAAGCCTGCAGGAT
GTCGGCGTGCTCGCCGGAATGGTTCACCTCGGATTGGTCGACGTGCTCCGCGACGTGCGGTTTTGGGGTGCAAACGCGGC
TCATACGGTGCATAATCGAGGGTGTCGGCAGCAGCAATTGCTCGGAGATCGGCAAACCAATTGGCGAGCAACGATGCAGC
GTGGAGCCGTGCAAGAAGGAGTCAGCGGTGAACAAACCGCCGAAAAAAGCGCACGAGCCAGCCAAGTGCGTGGACAAGTC
CCCGAATTGCGCGGTGGTGGTGAAGAACGGCCTGTGCCGGGTGAAGTACTACAACAACATGTGTTGCCAATGCCGTCAAT
AG
PEP:
>HSAL18513-PA
MLSAAGVSSSYMPEKYPVEVYHMLQERTQFGIGRDNRVRGTWGTWSEWSECSRSCGTGIQSQSRECVPLRRLLRRRSIIS
ENGTSSVRPICIGTYRRYHTCNTQECPNFPEDPRAEQCAKYNRRNYKGRSYVWVPFVDAPNSCALNCRAVGERFYATLEP
AVIDGTPCDAPNLRGRGGGGGGGGNGIGISTERNGERWLCVAGQCKSVGCDGVVGSDATMDACGVCGGQGRGCRLYEGIF
MEPILPKGHQQVTMIPKGAMSLNISELRFSSNFLALRDSNGSYILNGPWSYSPSGTYKAAGTTLTYQRGDRNRMECILAT
GPLNESLHLEILSLDRNPGVLYKYMLPMREVPDGKAIIAPPLLVAGSNDRGNEIPSPESHVTIRVPITRTSDRRGDLSST
RRDRDPARTQHVGRKEEMKHPPTTVMAGDQPKSKARKKKRRKFAWKIADFAPCSEECGGGVRTAILKCIREDNQTLVNEK
RCRNLERPKHPPPLRCNDHPCVPRWRAEPWSECSVTCGAGIRTRKLECVQKMEGRLMRVAASACAQPPDLRTMEACSLSA
CPNTGPELRHMHSQHDAPRWNVGAWGPCSTTCGRGIRNRTVTCITSGESCSLLNKPESQKPCEIAACNMVMDARHHAPWL
YSEWSSKCSTECGNGVKTRRVACADGSELFCNPKERPDMEMRCFGRGTSCDKAKWFTGPWTSCSVSCGVGVQRRSAVCLS
RTNDEFAVLPAKNCNEPKPASEQACRMSACSPEWFTSDWSTCSATCGFGVQTRLIRCIIEGVGSSNCSEIGKPIGEQRCS
VEPCKKESAVNKPPKKAHEPAKCVDKSPNCAVVVKNGLCRVKYYNNMCCQCRQ
Swiss-ProtThrombospondin type-1 domain-containing protein 4
SUPERFAMILYSSF82895  TSP-1 type 1 repeat superfamily     
Gene3DG3DSA:2.20.100.10     
PfamPF08686  PLAC; PLAC (protease and lacunin) domain     
SMARTSM00209     
ProSiteProfilesPS50092  TSP1; Thrombospondin type-1 (TSP1) repeat profile.     

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