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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS206478
PositionDPSCF300070:545677..563193[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS206478
sequence mRNA: 
>DPOGS206478-TA
ATGGATTTGTTAAGAAATATCTATTGTATCTCAAATTATAATAGAACTATATTTTTCATGATAGTTTTGTTTTCTTTCAA
ACTGTGTAGACCTCAGGACTTAAGTGAAGACTTTATTAATGAGGATAGTTTAGACTCTGATATTATGTTACCGGTGAAAG
TTAAGGCGAGAAATGTGGCAGAGAGTCCGTGTAGACTGAGCGAACTGCTATGTGATACGGGACAGTGTATATCGATGGAT
AAGTACTGTAATAGAGAAGATGACTGCGGAGATAAAAGCGATGAACCAAAATCGTGTACACCTTGTAACAGAACATACAT
GGGAGATGTCGGCCGTACTTACGAACTGGAGGTTCGTAGGCCGAGAGAGGATCATCTTCCATTTGTCTGTCATCTAAATT
TTACTGCTAATGGCGGCAACTATGGCGATATTATACAGCTTACATTCGACACTTTCACGGTGGGTAAATTTGTATCGTTT
ACTTCTGATGGATGTCCGGATGGACACATGACAATAGTTGAGAGAAGTTCATCACCACCGATGGGTCAATGGTGTGGCTC
AGCATGGGGTTATACTGTATACTTTAGCGAATCAGACTCTATAAATATGACTCTCCGTTTGGATAGACTGAGCCAGCAGG
GTGTTGGGTACAATTTCGACTTCAAGTTGGCATACAAGTTTCTAAGACGAAGCGAAGCTAGATTGCGGTACGGTAACGCG
ACTGTGGGGGCATGGAGGGGGGAACGAGTCTCTGGCACCTATTGCGACCGCATACTGAGCGACTGTGATCTACGCGCATG
CCGCATCCAGTCACCAAACTTTCCTGGAGTATATCCACGTAATGCGACGTGTACATACCGCATTGAACACACAAAGATAC
CAGCAGATAAACATGTTCTTTTGGCCGTAAGACAAACAAATAGTCACAAAATACATATCAAAGATCAAATAGTCAAATAT
GATAGAAGCCAACGAGTTTTAAAGATTTGGGACCAATGTAATGTCGTTCAGGATTATCTAACAGTTTGGGATGGACCTAC
AAGAGACTATCCGGTTCTAGTTAGACTTTGTGGAGGAGACGCAGTTCCTGACATAGTTAGCAGAGGGCCTAATATGTTAC
TAGAGTTTCATACCTCACCTTATGATAATCCTTTTCATCCAGTTCCGCTCAGTTATTTACCTGGTTTTGAGCTTGAAGTT
CAGGTGTTGTACGTGGACAGAGATTCCCATTCGTACGTGAGTTCAGATGGTCGTTGTCGGTTTGTTTTACGCTCCTCTGA
CAAGACAAGCGGGGTGTTAAGAAATCCACGACACTCCTTGCCACCAAATACATCTTGTGTGTATTACTTTCAAGGTCGTC
CAAACGAAATAGTATGGGTATCGTTTGTTAAGTACCACGCTGCGGGTTCGGAGCCGGCGGGATTCGATCAACAAAAGGAT
TGCTCTTCACAACTCACTATTTGGGATGGTGCGGCACCTGATGCAGATCTTGATAGAAAGTTGGAAATGAGTGACAAGAA
ATCTCTTCTCGGTTCATTTTGTCGAGAGGAATCTCCGCGTCTGTGTGACCATGCGCTTCTATCAAACGCTACGCGCGCCA
CCAGGCCTTGTGCTCCCACAGAAAGCTACATCACAACAGGACCAGCGCTTACTATTTTGCAGGAGCTACGTCAAGGTTCA
GCATTATATCCTGTCTCTTTCGTCTTGCGATACGAATTCGTAGATGTGAGTGAGCAAGGTCAACCATTAGTGGACTCTCA
GTCAGCGTGTGATAGAGTTTTTAAGTCAGCACTCACATATTCTGGAAGATTTCAAGCTCCCCGAGCTATATTTTACTATG
GGCGAGGTGGATCTCAAAATTTGACTTGTATTTTAAGATTTGAAGCTAAGCATGGAGAAAGAATACAGTTAACGTTTACA
AACACATATTTTGGAAATAAAATTTGTAGTACTCATAAAGATTCCAAGACAAGCCGATGGGTTTGTGATAGGCCAATTAA
AAGAATAATAGGTGGGGAAGGTTTAGCTCAGATTATTATAACTGAATATCCTTGGGAAGGGATCCCTATACAAAGAGATT
GTTTATGTACAAATCGCTCCGAACCTCTTAACGTTCACACGCTTACAGCTCCCGTCGTAGAAGTTAATTTTACTGTGACT
ATGATGAACATAACTGAAGATTATGACGATTTTCAATTTGAAGGTGAATATAAATTTATTCCCACTGGCCCCGGAGACGA
AAGTGTTTGTTCTACTGGTTGGGGTGATAGACGATTAAGAGGAAGCAGTGGGGAAATAAGATTGTATGACAACAGAGAAG
CGTCTGTAACTCCAGAAATAATGGGTGACAGAAATGTTATATCAGAAAGCGTCAGAGCAGAAGTTGCTTGTGTTCATAGA
CCTTGGTTGATAGAACCTGGAGGGGATGATGTAACACCTTTACAGGGTAGATATCTATATATCAAAGTACCGGGATATGA
AATAACGCCTACCTCACCATTTTGTCCTACACCAAATCGACTATTTATATACGAAGCACGAGATACTTCAATTCACAGAG
AAATTTGTCCTAAAGATTCTAACACTTTAGATTTGTATTCGCCAGGATGGAAATCATCACAAACAACAATAGAATCATCA
TTAAAACCTCATGCTAAGAGCTACGTAATTGATTTTCTACAACACGAACAAACCGATTACTCAATCAAATGGATAGAAGT
TATGAAAAAGCCATCTATTGACCATGATCCAGGGTCAAACATTTTGCCTTTATCGGTTAATTTAGATTGCCATCATAACT
GCCCAGAGTTGAATGCCTGTATTCCTATTACATTATGGTGTGATGGCAGTCCTCATTGCCCTTCTGGTTACGATGAAGAT
GACTCAAACTGTTCTTTTAAGTTGTCCTTGCCGTCACCATATGTTGCGGCAGTGGCCGGTATGGGACTTCTTATTTGTGC
TATCGCAATTGGTTTATGTGCATGTAAACGACGAAGAAAAAAAGATAAGGAGTTTAAGGCAAGACTCGACGACGCGCTTC
CACCTGAAGAAAGACCTTATGATCGTTCAAAAAGTAATGGCGTTCCAGAAGCTAATCGTCAATACGCAACTGTACAAAAA
TATGCTACAATAGATAAATACAGTTTAAGTCAAAAATATAGTGCGGGGCTCAATGATGTTAGGTATTATGATGAAGTAGC
TCAAAAAGATAAGCTAGCCGACACGAGGTATGCTAGCTTAGGGCGCGCTGGTCGGTGTAATCGAATGGAAAATAATAGAG
GCACTGGATCTAGAAGAATGCCAGACGTAGGCTATCCAGATCTAAAAGACGGATTTTGTTGA
PEP: 
>DPOGS206478-PA
MDLLRNIYCISNYNRTIFFMIVLFSFKLCRPQDLSEDFINEDSLDSDIMLPVKVKARNVAESPCRLSELLCDTGQCISMD
KYCNREDDCGDKSDEPKSCTPCNRTYMGDVGRTYELEVRRPREDHLPFVCHLNFTANGGNYGDIIQLTFDTFTVGKFVSF
TSDGCPDGHMTIVERSSSPPMGQWCGSAWGYTVYFSESDSINMTLRLDRLSQQGVGYNFDFKLAYKFLRRSEARLRYGNA
TVGAWRGERVSGTYCDRILSDCDLRACRIQSPNFPGVYPRNATCTYRIEHTKIPADKHVLLAVRQTNSHKIHIKDQIVKY
DRSQRVLKIWDQCNVVQDYLTVWDGPTRDYPVLVRLCGGDAVPDIVSRGPNMLLEFHTSPYDNPFHPVPLSYLPGFELEV
QVLYVDRDSHSYVSSDGRCRFVLRSSDKTSGVLRNPRHSLPPNTSCVYYFQGRPNEIVWVSFVKYHAAGSEPAGFDQQKD
CSSQLTIWDGAAPDADLDRKLEMSDKKSLLGSFCREESPRLCDHALLSNATRATRPCAPTESYITTGPALTILQELRQGS
ALYPVSFVLRYEFVDVSEQGQPLVDSQSACDRVFKSALTYSGRFQAPRAIFYYGRGGSQNLTCILRFEAKHGERIQLTFT
NTYFGNKICSTHKDSKTSRWVCDRPIKRIIGGEGLAQIIITEYPWEGIPIQRDCLCTNRSEPLNVHTLTAPVVEVNFTVT
MMNITEDYDDFQFEGEYKFIPTGPGDESVCSTGWGDRRLRGSSGEIRLYDNREASVTPEIMGDRNVISESVRAEVACVHR
PWLIEPGGDDVTPLQGRYLYIKVPGYEITPTSPFCPTPNRLFIYEARDTSIHREICPKDSNTLDLYSPGWKSSQTTIESS
LKPHAKSYVIDFLQHEQTDYSIKWIEVMKKPSIDHDPGSNILPLSVNLDCHHNCPELNACIPITLWCDGSPHCPSGYDED
DSNCSFKLSLPSPYVAAVAGMGLLICAIAIGLCACKRRRKKDKEFKARLDDALPPEERPYDRSKSNGVPEANRQYATVQK
YATIDKYSLSQKYSAGLNDVRYYDEVAQKDKLADTRYASLGRAGRCNRMENNRGTGSRRMPDVGYPDLKDGFC
Swiss-ProtEmbryonic protein UVS.2
SUPERFAMILYSSF57424  LDL receptor-like module superfamily     
Gene3DG3DSA:2.60.120.290     
PfamPF00057  Ldl_recept_a; Low-density lipoprotein receptor domain class A     
SMARTSM00192     
ProSiteProfilesPS01180  CUB; CUB domain profile.     
PRINTSPR00261     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     
OrthologiGroup-00042    Tolloid-like protein     

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