Data -> Danaus plexippus
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| Resource | [Genomic] [GFF3] [mRNA] [Protein] |
|---|---|
| Data source | MonarchBase |
| Publication | Zhan, S., Merlin, C., Boore, J. L. & Reppert, S. M. The monarch butterfly genome yields insights into long-distance migration. Cell 147, 1171-1185 (2011). [PDF] |
| Organism strain | |
| Assembly | MonachBase v2.0 |
| Genomic Size | 238 Mb |
| GC content | 31.6% |
| Number of scaffolds | 5,397 |
| Scaffold N50 | 715,607 |
| Number of contigs | 14,067 |
| Contig N50 | 50,721 |
| Gene Set | MonachBase v2.0 |
| Gene | 15,129 |
| Protein | 15,129 |
| BioSample | SAMN01758044 |
| Submitter | The Reppert Lab |
| Assembly level | Scaffold |
| GenBank assembly accession | GCA_000235995.1 |
| RefSeq assembly accession | n/a |
| WGS Project | AGBW01 |
| Assembly method | CLC bio's de novo assembler SSPACE v. 1.0; GapCloser |
| Sequencing technology | 454 GS-FLX Titanium; Illumina GAIIx |
