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Data -> Danaus plexippus

Organism Danaus plexippus
Lineage ;
Resource [Genomic]   [GFF3]   [mRNA]   [Protein]
Data source MonarchBase
Publication Zhan, S., Merlin, C., Boore, J. L. & Reppert, S. M. The monarch butterfly genome yields insights into long-distance migration. Cell 147, 1171-1185 (2011).  [PDF]
Organism strain
Assembly MonachBase v2.0
Genomic Size 238 Mb
GC content 31.6%
Number of scaffolds 5,397
Scaffold N50 715,607
Number of contigs 14,067
Contig N50 50,721
Gene Set MonachBase v2.0
Gene 15,129
Protein 15,129
BioSample SAMN01758044
Submitter The Reppert Lab
Assembly level Scaffold
GenBank assembly accession GCA_000235995.1
RefSeq assembly accession n/a
WGS Project AGBW01
Assembly method CLC bio's de novo assembler SSPACE v. 1.0; GapCloser
Sequencing technology 454 GS-FLX Titanium; Illumina GAIIx