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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS201522
PositionDPSCF300006:1236370..1246345[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS201522
sequence mRNA: 
>DPOGS201522-TA
ATGATGCATCACCCGAACATTCATCATCAGCCGATGTCGGGACACCCGCAGCACATGCCGGCGCACCAGCCCATGCCCGC
CCACCATCAACTGCCGCACCAAATGCACCGGGAGAACAGGCACGTAACTCTCACTAGGGTGCCGTTGGGTCCGTCACAGG
CGGGCGGTATGGGCGCCCACGCTCAGCTCGGCGGCATGGGCGTGCATCACGCCCACCATGGGCGACCGCACACCATTCGC
GCCGTACACCATCCGCCCACGCAACACCATAATGTACCAACGCCGACCCGTCTCCGTCGTCCTTACGGCGGTGGCTACAC
TCCCGGAGTGGTTCCCTTCACACAGCCGCCGCCGATGCCGCCTCCTACTACGCAACAAAACCACAATGTGGTATCGGGAG
TCAATACCAAAACGCCAACACCGACAATCGAAGCCAAAGAGAGTTTAGCGTCCCCCACCGGCACTGAAACTTCCGGTACT
GGCACTGGCACTGGCAATGGCAATGGCAATGGATCTGGCACCAGCACTGACGCGGATATTGACGACAAGGACAAGGCCTC
GGTAGAGGCGACCGACTCCGAGACACGCTCGACCGCCTCGGCCAACAGTAAAGAGAAGACACCAATGTGCTTGGTCAATG
AACTTGCCAGGTACAATAAGATTAAGCATCAGTATCGCCTCACATCAGAGACGGGGCCCGCTCACAAGAAAGTATTCACA
GTGACACTCAGACTCGGTGACGCTGAGGAATACACAGCTGAGGGGTCTTCAATAAAACGCGCCCAGCACGCGGCGGCTAG
CGCGGCTCTGTCGGGCACACGCTACCCCCCTCCCCCGCCGCGCGCCCCCCCGCCGCACACACACCACGCACACCACCACA
AGCACGCCGGTGACATGATAAACATCATATGCTATGTGTTTGTCAGGGTGCGTGTAACTGTGGGCGGTCGCTCCTGGGTA
GGCGAGGGGGCGACGCCCCAGGGCGCCCGGCACGACGCCGCAGCCCGAGCGCTCCACGACCTGAGATCAGTCGCAGAACA
TCAGGACAACGACAGCGGTGACGCCGGATCAGATAATATGTTGAACTCAGACGTTAAATCTCCAGTATCGCTGGTACACG
AGTTAGCTCTGAAACGAGATCTATCTGTTCAGTTCACCGTCAAGTCTGAGCGGGGACCGCCGCATATGAGGGTGTTCGTG
ACGCTGTGCACGGTCGGCGAGATGGAGACGGAGGGGGAGGGGAACGGCAAGAAGATCTCAAAGAGGCGAGCGGCCGAGAG
GATGCTGGAGGAGATGAGGAGGCGCTGGCCGCCCGCCCTGCTCAGGACCCGCCCGCCCACAGATAGAAGGAGACACCCGC
CCGCCAAGAAGAAGCCCAGGAACCTTATTAAGGAGGGCGGTGAGGAGGCTGGTTGTGCGAAGTCAAACAACGGCACTCCA
GCGTCCTCGGGCGGTTCAGACAACCCGATATCCCGGCTGGCGGTTGCAAGGAACGCGGCGAGGGCGCGCTCACCACAGTA
CCGGGTACTGGAGGAGCGCGGAGTGGCCAGGCGGAGGGAGTTCCTCGTGCAGTGTGACGCGCCACCGCACTCCGCCACCG
GGCTAGGACCCAACAAGAAGACGGCGAAGAGACGAGCTGCACACAACGTACTTCTAGCGATGGAGCTGAGTGCGAGCGGA
GATACTATGAACAGCAGTATACAGAGCAACGGAGGAGACGACACCAAGAGTGCTGCGGACGGGAAACGGAAGGAGGATAT
GAACGGTGGCGCCAACAGTGAGGTCCGGCAGCCCGTACCCGGCGTCATACTGATGGACTACCACACGCGGTCGGGACACC
CGCCGCAACCCAACGGTGTGAGCGAGTCGAGCGCGACCGGCAATGGCGTCCCTGTAGGTGCGGAGTCTGTTCCGGCGGCG
GTGCCCGTCCCAGCGGGGGGAGTCCCCGGGGCCACCAACACGCCCGGCGCCAAGGATCAGCTGATGTATTTAGCGCAGCT
ACTGGGCTTCACCGTACAGTTCTCGGACTTCCCCAAGCGTAATCACGGCGAGTACCTGTCTCTGGTGTCCCTCTCCACGG
AGCCCCCCGTCATGTGTCACGGGGGCGGCGCCTCCACCGCGCAGTCCCACGAGCAGTGCGCCCGGGCGGCGCTCAGAGCA
CTAGCCCTCATGGGACTCGACGCTCCCACCACCGGGTTGCCGAGCATGTCGGCCGCCAAGCCCGGTCCGATCAGTAACGG
CATCGGGGAGTGA
PEP: 
>DPOGS201522-PA
MMHHPNIHHQPMSGHPQHMPAHQPMPAHHQLPHQMHRENRHVTLTRVPLGPSQAGGMGAHAQLGGMGVHHAHHGRPHTIR
AVHHPPTQHHNVPTPTRLRRPYGGGYTPGVVPFTQPPPMPPPTTQQNHNVVSGVNTKTPTPTIEAKESLASPTGTETSGT
GTGTGNGNGNGSGTSTDADIDDKDKASVEATDSETRSTASANSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFT
VTLRLGDAEEYTAEGSSIKRAQHAAASAALSGTRYPPPPPRAPPPHTHHAHHHKHAGDMINIICYVFVRVRVTVGGRSWV
GEGATPQGARHDAAARALHDLRSVAEHQDNDSGDAGSDNMLNSDVKSPVSLVHELALKRDLSVQFTVKSERGPPHMRVFV
TLCTVGEMETEGEGNGKKISKRRAAERMLEEMRRRWPPALLRTRPPTDRRRHPPAKKKPRNLIKEGGEEAGCAKSNNGTP
ASSGGSDNPISRLAVARNAARARSPQYRVLEERGVARRREFLVQCDAPPHSATGLGPNKKTAKRRAAHNVLLAMELSASG
DTMNSSIQSNGGDDTKSAADGKRKEDMNGGANSEVRQPVPGVILMDYHTRSGHPPQPNGVSESSATGNGVPVGAESVPAA
VPVPAGGVPGATNTPGAKDQLMYLAQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAQSHEQCARAALRA
LALMGLDAPTTGLPSMSAAKPGPISNGIGE
Swiss-ProtDouble-stranded RNA-binding protein Staufen homolog 2
KEGG     K17597     
SUPERFAMILYSSF54768  dsRNA-binding domain-like superfamily     
Gene3DG3DSA:3.30.160.20     
PfamPF00035  dsrm; Double-stranded RNA binding motif     
SMARTSM00358     
ProSiteProfilesPS50137  DS_RBD; Double stranded RNA-binding domain (dsRBD) profile.     
OrthologiGroup-00514    Maternal effect protein staufen      

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