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Gene detail [Fasta]

Species Danaus plexippus
GeneDPOGS200452
PositionDPSCF300260:233175..240418[GBrowse]
MonarchBasehttp://monarchbase.umassmed.edu/tools3/Get_gene.cgi?id=DPOGS200452
sequence mRNA: 
>DPOGS200452-TA
ATGTTTGGTGTTATTAAATATTATATTTTTACGTACATATCAGTACTCGTATTACACGTAGAAAAATGTATATCAGAACC
GCAGATGGCGTATCTGGCACTATATAGCCCTGGCGATACAGATTACACGGATGTACTGGTCCGTGGGGAGCATGATAACC
TAACGCTGATCTGCGAGATGCGAGGGGATATCACGCCCAGGGTGTTCGTGTGGAACTACGTCGCCGATAGCAACACTACA
AGTGCTGGCAGGTCGTTCACCCCAGAGCCCACAGAGGCTGTGGGCAGTCGTATAGAGAAGATTGATCTCCAGCTATCAGA
CAGTGGTCACTATATGTGTTCAGCGCCACCGTTCAGCGTCACCAAGTACATCCTGGTCCAGCGGAGGAGTCCCCAGTGCG
CGCGGGGAGCGTTCTGGTGCGGTCATAGATGTGTGCTGCCCACATACGTGTGTGACGGGTGGTCGGACTGCGAGAACGCC
GAGGACGAGGCCCCGCCGATGTGCGCGACGAATCCTTGCGCTGCTCCTGATAAGCTGAACTGCTCCCTCGGTCGCTGCAT
CTCGGAGGCGGCTTGTTGTTCGTGGCGAGGCGGGGAGAAAGCCCTGTGCCGTCAGCCGTCCTGCTGTGACGAACATCCGA
GATACTCACAGGACGGTCTCCTGGAAGTGGAGTATCCTCCGCTGTACGAAGACAGACACTCCCCGGACGACTATGGTTTC
ATACAGTCGACCATATACACTGTGACTGCTTGCGCCTTGATCTTCATGATAGCGGTGGTTCTGCTGGTGTCCGCGCTGTG
TAAGATGCACATGAAGAGGGCCGCGCTACGGGGATACGAGCACGCGCACAGAGACGCCCGCGGATACACTGCCCGTTTCC
CTCCTCGCTACGAGGCCGCTCGTCTTATGGAGTCCAGCGTCACCGCCAGTCCGGTCCGGAGTCTCCACCTGGGTTCACCA
ACAGCTGGTCCCAGTAGCCCTCCAGGTCCCGCACCGTCCAGGGCTTTGGCGGCATTATCTGCTGCACTATGTTCGCGGTA
CCGACAGGTGCCGACTCAATGCTGTGAAGTGGAAATGAGGGACATAACGATGCCGCAATCATCCGTGACCTCGAGTCCAC
CAGAGCGACCCTTGACCCTTCAGCTCGGCCGGTTCCACTTCAACATACCAAGGTTCCGCAACGAGAGGCCCGACACTCCT
GACATAACGGAAATCAATATAGAGGACCTAGAGTTCATAAGGATGCCGTCCAACGAGACCTACACCCTCAACGGCAGGAC
GATCAGGCTTTTCGGGGGCAATTTCCAAAACTACCCTCTAATAAACCGGCCGCCCCCCTACAATGAGGCCATGAGGCACA
AATTCGGCCCACCGCCAGAATATTTAAGCCACGAGGTCCTCAACAACGACAGCGACGAAGACAACAGTAATATAGAAATG
CCGCCGTGCTACGAAGACCTGGCGAGCGGGCTCGGCTCTAATTACCAACCCGCCAACGAAAATGACAGCAATCTGTTCGA
CACTAGAAGCCTCGTGACGGACCAGGAGACGGATTCTCATGTAACCTGCTTAGAGGAGTTACCGCCTAATATGAACAATA
ACATAGAGCACGCAGCCTCGTACATATCAGTTATAAACTCAAATACCGAGGACAACAACAACACGTGCGTCATAGACAAC
GCGGTCGACAATGTAGAGACAATAAGCACAGTCATAGACAACCTGCCAGCCATAGACGACATAAACGCCAACGATTCCAT
ATACGGCGCATGTTGA
PEP: 
>DPOGS200452-PA
MFGVIKYYIFTYISVLVLHVEKCISEPQMAYLALYSPGDTDYTDVLVRGEHDNLTLICEMRGDITPRVFVWNYVADSNTT
SAGRSFTPEPTEAVGSRIEKIDLQLSDSGHYMCSAPPFSVTKYILVQRRSPQCARGAFWCGHRCVLPTYVCDGWSDCENA
EDEAPPMCATNPCAAPDKLNCSLGRCISEAACCSWRGGEKALCRQPSCCDEHPRYSQDGLLEVEYPPLYEDRHSPDDYGF
IQSTIYTVTACALIFMIAVVLLVSALCKMHMKRAALRGYEHAHRDARGYTARFPPRYEAARLMESSVTASPVRSLHLGSP
TAGPSSPPGPAPSRALAALSAALCSRYRQVPTQCCEVEMRDITMPQSSVTSSPPERPLTLQLGRFHFNIPRFRNERPDTP
DITEINIEDLEFIRMPSNETYTLNGRTIRLFGGNFQNYPLINRPPPYNEAMRHKFGPPPEYLSHEVLNNDSDEDNSNIEM
PPCYEDLASGLGSNYQPANENDSNLFDTRSLVTDQETDSHVTCLEELPPNMNNNIEHAASYISVINSNTEDNNNTCVIDN
AVDNVETISTVIDNLPAIDDINANDSIYGAC
Swiss-ProtVitellogenin receptor
SUPERFAMILYSSF57424  LDL receptor-like module superfamily     
Gene3DG3DSA:2.60.40.10     
PfamPF00057  Ldl_recept_a; Low-density lipoprotein receptor domain class A     
SMARTSM00192     
ProSiteProfilesPS50835  IG_LIKE; Ig-like domain profile.     
ProSitePatternsPS01209  LDLRA_1; LDL-receptor class A (LDLRA) domain signature.     

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