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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO012403
PositionSeq_1102970:476374..486698[GBrowse]
sequence mRNA:
>DPO012403-RA
AGCGTGCGGAAAATGGCCGCAGCCTAATTTTCACTGACTGCTTTTTATTTATTTTTTGCCAAAAAACTACGTTAATGTTT
TAATTGTATTTGCGACAGGGGCTTGGGTAAGAGCAAAGACATGTTTTCCTTATAATGTGTGCTTGTTGGTAATTGCGTTG
CGCCTATTAACTTGCCTGTTGTTCAGTGTTTATTCCTGGCTGCGAATGGTCAGGGTTGAAAGCTATTTTAAAGCCCGATT
GCGAATCTATTTAATTCGAATTGACGAATTCCACGAGCCTCTACAGCCCAAACAAAAGAATAGACAGCAAAACAAAACAA
ATTCGATTATCTTGTCGGGGCCTGCTGCGATGAAGGCGCTATTTTTAGCCCATTACTTTTATTCCAATTGAATGTGACAT
ATTTTTGAAAACAGCCAGAAAGCGGCTATTTTTACCACAGTGAGAGCGGGTTTTCACTTTTCTTTTGGTTTTTCAGCGCC
ACACTGACGACATGGTATACGAAAAATCCCACTAAATAAGGTCAATTTTGCACTATTGGTTATCATCGAAGTTGACCTGT
CCCAGCCATATTAGCCACTTCATCTGTTCACAATGCCCGTTCTGAGTCCACATAGAAGTTCCTCGTCAGGACTGTCGGGC
TCCTATCGGCCCACATACAGTTCAGCTCTAGATCGCCCTTATTACTCTAGTTCTGGCTACTCGCCGAGGATTAATAGTTA
CTCTGAACGATTCACCACCAGGAGTTACACTGACTCAGATGGCAGAAGAGTTTACTCCAGGAGCGCCTCTATTACGGAAG
ATGGCGTTACAACAAGATTTAGAGAAGAATCAAGAGAGGGTTCTTTGTCCAGAGACAGCGGCATTAGTTCTATTAGAGAA
AACAGCGTATATGACTACCCACGTCGGGATAACTCATTGAACAGATCAGAGCGACTATCGACCGCAGGCATGATCGAATC
GGTGGCTGAAATGCGGAATAAATATTCGCCTGCCAACTACGTTCCAGCCATCTACCGAAACAAGTATGAGAACATTTCCA
GGTCGAAGTCCATCAATGATATTGGTCTGCCACCAATCGAATCAAAGTCCACCAGCCCTTCGTCAGCATTGTCCCGCAAA
AAACAGGCACGGCGCGGTTCGACAGCAGACGCCCGCAACGGGCTCGGATTGGTCGGGCTGCGAAACATCGGCAACACTTG
TTTCATGAACAGCGTTCTCCAGTGTCTGAGTAACACCCGGGTGCTATTGGACTACATCAGAAAAGACACTTACCAGAAGG
ATATTAACAATGTGACATCGTCAATGAAAGGAGCGCTTTTTAAGGCATTCGGGGAACTCATTAAGGAATTGTGGGCTTCC
GACTCTTCTGGCCCCGTTAATACAGCCGCACTAAAGTCGCAAATTCAAAGATTCGCCCCTCGTTTTATGGGCTACTCGCA
ACAGGACGCGCAAGAGTTTCTGCGCTATTTTTTGGAAGGATTACACGAAGACGTTAATAGAGTGACGAGCAAACCGAAAC
CGATCACTACAGACATAGAGGACAGTTTGCCCGATGCGGAAAAAGCAGCAGAAGCGTGGCGACGTTACTTGAGGTCTGAA
GACTCGCTTATTGTGGATGCTTTTGTCGGCCAGCTAAAATCGACCTTAAAATGCACACATTGCGGTCATTGCAGTGTAAC
TTTCGATCCTTTCTGGGACCTGTCGCTTCCTCTGCCTTCCGGCAGGAATTCAGGCGCCTTAAGATTATCGCATTGCCTCG
AAGCATTTACCAAGGAGGAGACTTTGGACGGAGATGAAAAGCCCAAATGCGCCAAATGCAAAGAACGGCGACGGTGTACA
AAGAGCTTCTCCATACAGAGATTCCCACAGGTTCTAGTCATTCATTTGAAGCGTTTCTCGCCGTTGGAACGGTTCCGTGG
CAAACTAAACACCCTTGTGGAATTTCCGCTTGAAGGCTTGGACTTGACTCCGTATGCTTCTGAGGCGCAAAGTGGCCCAA
GTCCGCGATACAACTTGTATGCTGTGTCCGAACATTCGGGCACTCCGTACTCTGGGCATTATACGGCGCATTGCAAAAAC
CCGATAGATGGAAGGTGGCATGAATATAACGATTCTCGAGTAAGTGCTGCTTCGGGACGTTCTGCAGTATCAGCGGAAGC
GTACGTTCTTTTCTATGAGCGAGAAGGTGGCAGCAGTCAGCGATCGCGATTGTAAACCGGATCAATTCACCTAAAAGCAA
CTAAAACTCGTAAAGTGTGTCGAAGCCTACATGGTAATATGCCTAATTTTCAAACAGGTTCTATTTGAACAAAATACAGG
TTTTCACTGACAAAAAATTCGAAAACCGCTGAAAGCAATTAGTTAAATTTTCGGACGTTCTAGGGCTCTATCCCAATTGA
TTCCTTATTAGAACCTGTATTTTTATTTGGTAGATCCTTCTTAGTCATTGTTTGGGCAAACCAGTCCTTCAGTGAGTACT
TACGTTATGTTTACCCATCTAGTCGATTTGTTGTATTCGAGGGAATAAGTGGTTTTGGAGTAATATCTTTTGTATATACC
CCTGTTTGATGTGATATTTTTGTTTTACGTTTACTATTTTTTGTATATTAGTTTATACAAGTTTTGGCTTATGTTATCCA
CGTGACCTTTGGCCGGTTGTCTTCGAATAAATTAATCGATTGCGAATTTATTGGAATTAATGAATAAGTGTGTCTTCGCT
CGAATCAAGGTGCCATAGTCAGAACTGCCGGGCTGTACAGGAAAATTAGACTTTACACAGAAATCGTGTTACAAAAACAG
TCGGAAGGAAGGACTAGGGACCTACTAGGAGCACATTGTTGATATTATAGCACTACTTAGAGAGAATATTATTAACGGTT
AATGTTTCTTACTCAAAAACCACTTTTCTTTGTTTTCCTTTAGCCGTAAACCTTAATTTAGTCTCGTGTTTTGGAGCGTG
GCCCGTTGATGGCCATGTCCGCTTTTAGCTAATCGCGTCTTCCCCTCGGGGGAGGAGGCAAGTCCAGCACACCCACAAAA
CTCACTCGAAATACGGGATATTCTAAACACAAATTCTATGAGAATGTATTATATTCGATTTATTAAGCTTTATATTGAAA
ACTGTTTTGAAAGCACTAACTTAATAAATACTGTTTGCAAAA
PEP:
>DPO012403-PA
MPVLSPHRSSSSGLSGSYRPTYSSALDRPYYSSSGYSPRINSYSERFTTRSYTDSDGRRVYSRSASITEDGVTTRFREES
REGSLSRDSGISSIRENSVYDYPRRDNSLNRSERLSTAGMIESVAEMRNKYSPANYVPAIYRNKYENISRSKSINDIGLP
PIESKSTSPSSALSRKKQARRGSTADARNGLGLVGLRNIGNTCFMNSVLQCLSNTRVLLDYIRKDTYQKDINNVTSSMKG
ALFKAFGELIKELWASDSSGPVNTAALKSQIQRFAPRFMGYSQQDAQEFLRYFLEGLHEDVNRVTSKPKPITTDIEDSLP
DAEKAAEAWRRYLRSEDSLIVDAFVGQLKSTLKCTHCGHCSVTFDPFWDLSLPLPSGRNSGALRLSHCLEAFTKEETLDG
DEKPKCAKCKERRRCTKSFSIQRFPQVLVIHLKRFSPLERFRGKLNTLVEFPLEGLDLTPYASEAQSGPSPRYNLYAVSE
HSGTPYSGHYTAHCKNPIDGRWHEYNDSRVSAASGRSAVSAEAYVLFYEREGGSSQRSRL
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 2
KEGG     K11833     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00972  USP_1; Ubiquitin specific protease (USP) domain signature 1.     

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