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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO012362
PositionSeq_1101828:169213..172366[GBrowse]
sequence mRNA:
>DPO012362-RA
ATGAACAAGAACAATGTAGTCGCCACTGGAAGGTTTTCCGTTCACAGAAGAAACCTTTACTACTCATTTTACATTTCTGA
GAATGCAGCCCGACCGCAATCACTTCAGTTCCTTGACCAGCAAGGCAACATTTTGGAGGAGTTCACACTTTCCCACACGG
GAGGATTTGTAAACAGCCTCTATCAAAATGCCTCCCGGAAAGTTTGTGGAGTGTGGAGGCGATTGGCCAAAGACTACAGG
AAATTGTTAAAGCAGGAGAAAATGTTCGCAGTGTTGGTGTGGGGTGTGAAGGATCAAGCGGAATTTACTCTGAGTGGACA
GATTTTGAAGAATGGGGCTCTACCAACGGAGTTGCTCAGTGCTCTTCTCGAGCCTGCTCCGGGATCAGACTCACTTTCAA
TGACTGGGGCTGGCGGCACTGCCATTGTCTCCATTTCAACTTCAGTTACACCTTCTATAAATGTGGCGATTATCTTTAAT
GGACTGTTTATGCCGGCAGAAGTAGCGAATATCCCAATAAACATTACATTGTCTATGGACGAGAGGAAGCAAATAGTTCT
CCAGGAGACTGTTCAAGTTTCAAAGCCTGCCACTGATATAAACGTTGTGAATGTGAGCTCATCAATTACACAAGCTCACT
TGCGCTATTTGACCAGAGGACGAATTATTATAAGTGTTACTTCTGTATCGAAACCCGATGCCCTGAAACTAAGTGGCAAC
GTTATCACTAAAGCTTCTTGTGAAATGTTCCAAACAACCCTGTCCTCTGCAGCAAATACTCCAAATCCTGATGGGGTGTC
CGGAATGGCATGGCTCTACTTGAATAATGTTGGATCATTGATCTACAACATCCAAATCGATAAATTGCCTCCGAAAGAAA
ATCCCCCTATTATCACACTGATCGACACGAGCTCCAAAAAGAAAACTGAGCTGGAAGATTTGACTCCTTATTTTCACGGA
GATGGCTGGGCTAATGGTACGTTGGACAAGCTCACCCCTCGAGTTCTAGAGCCGTTGTATTCTGGAGATTTGGCAATAAA
CGTAGCCACTACAAGTGATAACAGCTTGATCAAAGGAAAACTCATTTCTAAGCCGGTTGATGAGGCACGAGACGCAGCAG
CTCCAGTTTTACTCAAGAGAGAATACACCAACTTATCAACTGGTACTGTAGGCTTAGCATGGATTTCTGTGGACAATGAT
TGTCACTTACACTACGATATATCCATGACAGGCATTGGTCAAGGTCGTAAAATGGAACTCTGGCTGGAACTTTACCCAAT
GATTGCTCCTGGCGCTCCGTATATAAATAAACAATTGGATGCGTTTGAAGGCAATTCCGTAGAAGGATCTCCAGTGGAAG
TGCTAACCGATGACGAGTTAAACAGACTGGAAAATGGTGTTAGTTTTTTGAAGGTTAAGGATGAACGGTCCAAGATGGCT
CTTCTGATCGCGACAGTAACCAAAGTTTCCATTCCGCCGCCTTGCAGGCCGTACTCATCTCCAGACTTTTCCCTTATCAG
TCAGCACGATATCATCCCTATCATTTCCACCGGCGAATGTTTCTTCGAAGAAAAGTTCTATAAGAATGAAGAAATTTGGG
TTTCCGCGAAGAATCCCTGCCAAATGTGCTATTGCCAGGACGGTTCCGCCAAATGTGATTTTATGACTTGTCCAGCCAGC
AATTGTACTGAAGGCAAGCAAATAACGATAACAGGAGAATGTTGTCCGTTGTGTGTAAACAACTCTATCCCTGTGAGGGA
GTACAATGGCCAGAAATGTACTCTTAGCGGAAAATCATACTTGCCAGGTACCAGATTCCACCCGTTCCTAATTCCCTTCG
GTTTCGATAAGTGCACCGAATGCTACTGCGATCCGGATTCGTATCAAATCAGGTGTAGCCGATTGAACGACAATGAAAAG
CACTGCTGTCCGAATTGCAACAAGAAGACATTCGATATCAACGATCCGCTTTCCGACGATTTTGTGTCCAGAGAAGTTTC
AGATTATTCTGTCAAGGACCATGGCAGCGAGTACCAGAAGAAGAAGGAAAATATTGCAGCGAAAATTTTGGAGGAGGGCG
GTTGCAAAAACCCAAGCAATCCAAAGAAACCATTTGCTAATGGGGCCGAATACCATCCCTACATTGACTCTCTGGGAGAG
TACAAGTGCGTTACCTGTAAATGTCAGGTAAATATTCCAGATTTTTCAGTTACTATATAG
PEP:
>DPO012362-PA
MNKNNVVATGRFSVHRRNLYYSFYISENAARPQSLQFLDQQGNILEEFTLSHTGGFVNSLYQNASRKVCGVWRRLAKDYR
KLLKQEKMFAVLVWGVKDQAEFTLSGQILKNGALPTELLSALLEPAPGSDSLSMTGAGGTAIVSISTSVTPSINVAIIFN
GLFMPAEVANIPINITLSMDERKQIVLQETVQVSKPATDINVVNVSSSITQAHLRYLTRGRIIISVTSVSKPDALKLSGN
VITKASCEMFQTTLSSAANTPNPDGVSGMAWLYLNNVGSLIYNIQIDKLPPKENPPIITLIDTSSKKKTELEDLTPYFHG
DGWANGTLDKLTPRVLEPLYSGDLAINVATTSDNSLIKGKLISKPVDEARDAAAPVLLKREYTNLSTGTVGLAWISVDND
CHLHYDISMTGIGQGRKMELWLELYPMIAPGAPYINKQLDAFEGNSVEGSPVEVLTDDELNRLENGVSFLKVKDERSKMA
LLIATVTKVSIPPPCRPYSSPDFSLISQHDIIPIISTGECFFEEKFYKNEEIWVSAKNPCQMCYCQDGSAKCDFMTCPAS
NCTEGKQITITGECCPLCVNNSIPVREYNGQKCTLSGKSYLPGTRFHPFLIPFGFDKCTECYCDPDSYQIRCSRLNDNEK
HCCPNCNKKTFDINDPLSDDFVSREVSDYSVKDHGSEYQKKKENIAAKILEEGGCKNPSNPKKPFANGAEYHPYIDSLGE
YKCVTCKCQVNIPDFSVTI
Swiss-ProtDorsal-ventral patterning protein Sog
KEGG     K04657  CHRD; chordin     
SUPERFAMILYSSF57603  FnI-like domain superfamily     
Gene3DG3DSA:2.10.70.10     
PfamPF07452  CHRD; CHRD domain     
SMARTSM00214     
ProSiteProfilesPS50933  CHRD; CHRD domain profile.     
ProSitePatternsPS01208  VWFC_1; VWFC domain signature.     

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