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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO012242
PositionSeq_1102694:2916940..2924663[GBrowse]
sequence mRNA:
>DPO012242-RA
ATGTCAGAAGCAAGAGGCAATGACCAGAATGGCGGGGCCACAAAAGAACCAGCATTTAGTGAAAGAGACAAGGCCATGTT
AGTTCAAGTGTTTGCACAGCCATGTGCCAATTCGGACTGTACTAAAAGCACCTCGGATGAATCCAGCAGCAGAACTGACA
CAAGCCCAAATAGTCAAATTGAAGCCCAATGTCAGTCAGTTCTAGCTAACACCATTCAGAATCCAGAAGGTGCTGAGATA
GTAAACAACTCGACAAGTGAAAGGGACAACGCTGTAGCTAAAATAGACCTTGACGAGGTGTCCAGTCATTCTAGGGAGCT
CAAGTCCCTTCTGGCTCTGTCCAAGGAAGCCAATTTAGACACCAACATTCCTAGGAAGCGCAAGTCAAATAGTGTGAAAC
GAAAGCTGGAAGGTGAAACACGTCTTAGTGCTGGCAAAGGATTTAGAATTCAATATCCTGTGACTGCAGAAGCTGAACTT
GAAATGGAGCTTCACAGTGCTGAAAGATCCAAAATGGATTTCCAGGAGGATGACAGTTCTTCAACAAATCTGACCCCCCC
GAAAGGCTTTAAGCAGAAAAAAAGTGGCGCATCTGAAACCTCAGGAGAGAGCATCCATGAGGATAGCGCTAGAAAGAATC
GAAAACCGTTCATAGGCGATCTGCCAATATTTAAATCTGAACCCTTTATTCATGCGGTAAATGACAACGACTTTCCAGAG
TACAAAAAGTATATTATTCAGCCTATGAATTTAACTTTGCTCGAGAAAAACATCAAAGAGAACGTGTATGGCAGCACTCA
AGCATTTGAGGCGGACGCAAAGTGGATTTTGCATAACAGCATTGTATTCAATTCATGTGAGCATACATTTTCTGTTGCTT
TATCCGCGGTTAATATTCATCAGTCTAAGTTGACTAGCGTGGCGAAAACGATCATCAAAATATGCAAGCAAGAAATGTCC
GAAATTGAAAACTGCCCCTGTTGTTATCTGAACGCTAACACGAAAAAAAAGACTTGGTTTGTGGAAGTTTGCCCCAAGCC
ACATTTACTTGTTTGGGCCAAATTAAGAGGATTCCCATATTGGCCTGGAAAAGCTATGAGTTGCAAGGATGGAATGGTAG
ATGTTAGGTTTTTTGGTGCACATGATCGAGCGTGGGTTCCAGAAAAAGAATGTTTCCTGTATACGCCAAAGGATCCCAAT
TTGTTTCGTGTTAAAAGAGCTGATATTGAACAATGTGTGGAGGAGTTGGAGTTGCATGTTGAAAATCTCAAAGCCGTTTA
CGATGATTTCAATTATCCACTGTTCAAAACCCCCATCGATTCGGACAATGAACTGAAGCAACTGCAAATGTTCTTGCCCA
GATATAAAGCCTACTTTTACACAACCAAGGAGCAAAACCAAGGTATGGATGCCGCTGAAGTCAAGAAGGAAATTGTTGAC
AGTGATTCTCTGGGTGAAAAATTCCAAGAAAGTCTGAATATGAATATGAAGGGCATGCAAAGAAAAGACACAAAAAAATC
CTTAGATGATGAGGCCATGGAGGGATATGAACTTTCCGCGGTAACAAAATTTTTGATAGGTACTGACGATGAATCAGTGA
CAGCCATTGACACCGAAATGCGAAAAACCTTACTAAAAATGGCACAAAACCCTGACGAACATCAAATAGACCAAGATGAC
ACTCAAGTTGCAGACACCGGCGGCATTGAACAAGATGATTTCGATAAGGAAGCATTTAAGAATATTTCGCTTCACATGAG
AGTTTTATTGAAGAAATCTGATTCTGAACCGTGTAGTAAACGGCCATCGGTCGACGAACGAAGACCTTGTCGCAGAAATA
GCGAATCAAAGTCAAACATCAACCGAAGTGCCGACAAGATAAGTAAAGTGAACATTTCTGACGATATGGAAGTGAGACTA
GGAAAAGAAAAGGCCGAACGCGTTTCCGAGAATATTTCATCCAGCAATAGCGAGTGTTCCAGCGACGTTAGCGTGGATAG
CAAGAAGCGGCCCGTCCAAGTAGATGTGGATAATGTGGAATTTACTATTTCCCCGGCAAGGAAGTTGAAGATGGTTGATG
CTCTTATGAAGCGATTTTCTGATGGTGATTCGGGGGCGGAAACTGCCAGTTCCAACACCAAGTTAATTCCTCGGAATCTT
AAAAAAGCAAAGCGAAGCCTTGTACCCCATGAAGAATCGGCTACGGAAGGAAATTCTGTCAGTTCCATCGTTATGAATGA
AGACGAAGAGAAAACGGAAATTACATGTGATGAAGCTGATAAAATTACAAAATCTTTCAATTCTCCAACAAGCAAGTATG
ACGGTCTACCTGTCACGCGGACAACGCAAAAAAACGAGGATGTAAGTAAAAGAACTGTAAACAGCTGTGCTAGCAAGAAG
CGGAGCAGGTCCCGGACAAAAACGTCTGGGAGTAAACTGCTTCCAAGGGTGTCCAAAAGTGAACAGAAGATTGAAAATAA
TCCAAATGAGTCAGTTCAGCATGAATCCGAAGTAGCAGATGTATCAATTGAGCAACAATCGAATAAGCCAAGTGACGAAA
TGCAGATTTCAAATAATTCAGAAGCTGTGCAACAGTCTTCAGAAGTCAACACGCCAATGTTACAGAAAACGGATGCAAAA
CTTGTCTCAAAAGAGAGTAAATACTCTAGTAGTTCGGAAGATGATGACTGCACTATTCTTGCGAGGCTGGTGAAAAGCAA
TTCCTCAGTGGCAGAAGGAAAACGTTACAAGAAAAAGGCAGCAGGGAAAAAGACTCCGGATTCTGATCCCGACACAGATG
AACATATGGCTAACGTGGAATTGAGTATAGACAAGGCTAACATCCTCAATATAATTCATGGTTCGCTAGTGAATGCAGAT
ACAGCTATTGATCAGGCCAAAAGCGATAATGAAGAATGTTCTTCGAAAAATACCGACCAGAGGCAACGCAAAAAACGAAA
AGCGAGTTACGATTCTAGTGATGGAATAATTGAAAGTCGAAACAAAGTCCTTAAAATTGTGCCGGCGGAAAATGTCGTAA
ATCAGCCCAACGACAATCACCAAATAGATGACAAAGACGAATGTGATCAGTCGAATCTGAAATCGTCTAAGAAACCCGAT
TTTTGTCGCAGTTCGCCGACTTTTTCAAAGCACAATTCGACACACGGGACTTCTGCTGATGAAGCCAAAACCCACACTGA
ACCTGAAGGAGGTTCACGTGGTTTTCAAGACCTGGAGGCTAAAAGGAAGTATTTATCAGCTCTTAACATACTTGAAAAAG
GCGAAGCGGACGCACAAAAACCGAAAACTCACGAAATTCGTACTCGCTCCAAAACCGAAGAGAAAAGGGAAAGGTTGCGA
ACTCCGTGTTTAGTGTCTTCCTCGGCTAACACTGCAGCCATTCGACATTTGACTACTCCAGCGCAGATATGGCATCCTGG
TCAGAATTCCAATTTAGACCTAATGGGCTTGAATGTGAGTCGATCGCAAAACTACATCCCTCAAGGCGAAACATCATCAA
AATCGGTCACCTCTCAAATTGCTTCTAAAACCAGCGGCGAATGCCCTGCTATCAGAGTTGTTAATGGTATGCCTGAGCTC
AGCTTCAATGGACCTAGTATCGAAGCAACAGCTGGTGCTACTTCTGCCAGTTCTCGTCAGTCCGAAAACGAGGAGCGAAA
CCAAGAAGTGGTTTGTGGTGTTTCTGAAAGGGCACAAGCCGGAACTGAATCGTCAGAAAATGGAGAAAACGTAGAAGATT
ACGAGTTCGCGGCGCTAAACAACGCAGTACACGAAAATGTCGGCAGGATCGTGAATGACTTAATAAGAAGGCCGCCACCG
AAATTAAAACCACGTCCACCGGGAGCGTTGAGTCAACAGTTTAGTGAAGGCTTACCTAGTTCTGCAGGCCCTGTTACAGC
AAGGGTTAATTCAGTAGCTTATAGATTGGGAGATTATTTTCGAGGAATGTTAATCGAAACGTTAAAGGACCTAGGGAAAT
CTAATAACACAGAGGCGGCCATTATCGGTTTAAAACAAGAAATCGAAACATTGAAGCACAAACACAATGTAGAGATTTCT
GAAATAGAGAAAAATATGACTACAGTACTAAAGGACATCCAACGAACTGTGATAGAAGAACGAGAGAGGGTCATTGAAGA
AACCAGGGCGGCTTCCGAGGCGGAGGCAATTAAACGCGTGGAAGAAACAAAATTAAAACAATGGTGTGCAAATTGTTTAA
AAGAAGCTCAGTTTTATTGCTGTTGGAATACAAGTTACTGCGATTATCCTTGTCAGCAGAAACACTGGCCTACACATATG
AGCAAGTGTAGCCAACATGCCAGTCAGTCTTCGCAAACAAATTCGTCTACGATCGTTAGACCGAACAGCCAACAACTAAT
ACTTAGACCTGCAAATCCGCCATCAAAACGTGGCGTTGGG
PEP:
>DPO012242-PA
MSEARGNDQNGGATKEPAFSERDKAMLVQVFAQPCANSDCTKSTSDESSSRTDTSPNSQIEAQCQSVLANTIQNPEGAEI
VNNSTSERDNAVAKIDLDEVSSHSRELKSLLALSKEANLDTNIPRKRKSNSVKRKLEGETRLSAGKGFRIQYPVTAEAEL
EMELHSAERSKMDFQEDDSSSTNLTPPKGFKQKKSGASETSGESIHEDSARKNRKPFIGDLPIFKSEPFIHAVNDNDFPE
YKKYIIQPMNLTLLEKNIKENVYGSTQAFEADAKWILHNSIVFNSCEHTFSVALSAVNIHQSKLTSVAKTIIKICKQEMS
EIENCPCCYLNANTKKKTWFVEVCPKPHLLVWAKLRGFPYWPGKAMSCKDGMVDVRFFGAHDRAWVPEKECFLYTPKDPN
LFRVKRADIEQCVEELELHVENLKAVYDDFNYPLFKTPIDSDNELKQLQMFLPRYKAYFYTTKEQNQGMDAAEVKKEIVD
SDSLGEKFQESLNMNMKGMQRKDTKKSLDDEAMEGYELSAVTKFLIGTDDESVTAIDTEMRKTLLKMAQNPDEHQIDQDD
TQVADTGGIEQDDFDKEAFKNISLHMRVLLKKSDSEPCSKRPSVDERRPCRRNSESKSNINRSADKISKVNISDDMEVRL
GKEKAERVSENISSSNSECSSDVSVDSKKRPVQVDVDNVEFTISPARKLKMVDALMKRFSDGDSGAETASSNTKLIPRNL
KKAKRSLVPHEESATEGNSVSSIVMNEDEEKTEITCDEADKITKSFNSPTSKYDGLPVTRTTQKNEDVSKRTVNSCASKK
RSRSRTKTSGSKLLPRVSKSEQKIENNPNESVQHESEVADVSIEQQSNKPSDEMQISNNSEAVQQSSEVNTPMLQKTDAK
LVSKESKYSSSSEDDDCTILARLVKSNSSVAEGKRYKKKAAGKKTPDSDPDTDEHMANVELSIDKANILNIIHGSLVNAD
TAIDQAKSDNEECSSKNTDQRQRKKRKASYDSSDGIIESRNKVLKIVPAENVVNQPNDNHQIDDKDECDQSNLKSSKKPD
FCRSSPTFSKHNSTHGTSADEAKTHTEPEGGSRGFQDLEAKRKYLSALNILEKGEADAQKPKTHEIRTRSKTEEKRERLR
TPCLVSSSANTAAIRHLTTPAQIWHPGQNSNLDLMGLNVSRSQNYIPQGETSSKSVTSQIASKTSGECPAIRVVNGMPEL
SFNGPSIEATAGATSASSRQSENEERNQEVVCGVSERAQAGTESSENGENVEDYEFAALNNAVHENVGRIVNDLIRRPPP
KLKPRPPGALSQQFSEGLPSSAGPVTARVNSVAYRLGDYFRGMLIETLKDLGKSNNTEAAIIGLKQEIETLKHKHNVEIS
EIEKNMTTVLKDIQRTVIEERERVIEETRAASEAEAIKRVEETKLKQWCANCLKEAQFYCCWNTSYCDYPCQQKHWPTHM
SKCSQHASQSSQTNSSTIVRPNSQQLILRPANPPSKRGVG
Swiss-ProtProtein kinase C-binding protein 1
SUPERFAMILYSSF63748  Tudor/PWWP/MBT superfamily     
Gene3DG3DSA:1.20.920.10     
PfamPF00439  Bromodomain; Bromodomain     
SMARTSM00293     
ProSiteProfilesPS50014  BROMODOMAIN_2; Bromodomain profile.     
CoilsCoil
ProSitePatternsPS01360  ZF_MYND_1; Zinc finger MYND-type signature.     

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