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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO011413
PositionSeq_1102820:109246..126049[GBrowse]
sequence mRNA: 
>DPO011413-RA
ATGGAGCAAAATATATATAGATTTTTTGGAACATTTGCATCAAAGCCTTACAACACTTTCATTGATAAGTGCATATGTAA
GAAGCTGAAGGAGTTAACGCAGCGCTGCAAATGGCTTGGTGCGCCACCCGACTGCACCGGCGCAGTAACTCAGTTCCTTT
GCAATGAAAACGGAAAAACGACAAGGGGCTACATTATGTTAGTAGTTGAATGTATTCACCTGAGAGGTCGTTCGTCAATC
AATAACGAGTTTGAAGAAGCACTGTTGCACGAGGAAGCAGAACTTTTTATACAGGAAGATCCAGAAATTAGCAGCTCACT
TCTGGACGCCATATATCTGAAACGGTTCTTTGGAGACAAGATGAGCTTGATGCTAGACACTCTCGAGTGCCCCTCCAGCA
ACATCATCACATCCCGATACCAATGCAACGTTAAAGGAAAATGGGTGGACTGCACCCGGAAGCATTGCTGCAATGACTTC
ACTTTTATCAATGGCAGATGTATGCCCAAAGACGAAGATCCTTGCAAATTGGGCTTATGCGAACAGCGTTGTAGCGTCTA
CCTACAACGAGTGATCTGCACATGCTTCGAAGGATACAAATTCAGTGCGGAAAACCAAAGACGAGGAATCAAACCTGTGT
GTGTAGACATAGACGAATGCGAGGACCGAAACGGAGACTGCGAACACAGGTGCAGGAACGAGTTAGGCGGTTATCGTTGT
TCCTGCGACGAAGGATATATCTTAAGGGCAGACAACAGGACCTGTGAAAAACCGACCGACAATGGCAGGAATAACGGGGA
CATGGAGGAGAGATTGGGGAGCGCGATGGCGGCCCATTCAAACCGATGCTTTGCAAACTGCGAAAGTCTCGTCAGGTTGA
ACGAAAAACTCAAAAACTTGCAGGAAAAGGTAGGAAGGAGTGCATGCGCTTTGAGCACAGCCATTCGATTGTCGAGCTTT
GCTTCCGGACCACCGGGACCCATCGGACCGCCTGGACCGCCTGGGCCTGCTGGACCTAGAGGATTTCCAGGAGTGGAATC
TAACAGCATATCCAGCTCACAATCTCATCTTGATTACACCTATTCGATGTTAGACGCGTTCGTGCCACTTTCAGACGAAG
AAAACGCACAATGCAAATGTAAACGAGGCGCTCAGGGGCAAGAAGGGCCGCGAGGGCCCTCAGGTCAAAAAGGCGAACAG
GGAGAAAGGGGGTTGCGTGGTCCCAAAGGAGACCGAGGATCCTTCGATTTCCTGTTACTAATGTTGGCTGATGTGCGTCA
CGACATAGTCCATTTACAGAAAAAGGTTTTCGTAGGCGAGAGGCCGCCGAAGTTTGACTTTGACTACGCTCTTTCAAAAA
AGAAAGTCAAACACAAGCACAGAATCCTCCAGAAGCAAAAGCTGCTAGAAGCTTATGTGAATCCATTGGTGGAAGCGACG
AAAAAACCTGAACCAGCATCCAGAGTGGCTCAGGCAGAGGCCCAAGCAACCACCGAACGAGCGATTAAAGTTTCCACAGT
GCCTTTGACTGCTGATACTGAAGAGTTTCGAGACTTTGATATGTCGAATCTAGACGACCATTTGGAAAACTATGACTGGT
CGGGAGAGGAAATGACCGATGAAGACTACTTTTAA
PEP: 
>DPO011413-PA
MEQNIYRFFGTFASKPYNTFIDKCICKKLKELTQRCKWLGAPPDCTGAVTQFLCNENGKTTRGYIMLVVECIHLRGRSSI
NNEFEEALLHEEAELFIQEDPEISSSLLDAIYLKRFFGDKMSLMLDTLECPSSNIITSRYQCNVKGKWVDCTRKHCCNDF
TFINGRCMPKDEDPCKLGLCEQRCSVYLQRVICTCFEGYKFSAENQRRGIKPVCVDIDECEDRNGDCEHRCRNELGGYRC
SCDEGYILRADNRTCEKPTDNGRNNGDMEERLGSAMAAHSNRCFANCESLVRLNEKLKNLQEKVGRSACALSTAIRLSSF
ASGPPGPIGPPGPPGPAGPRGFPGVESNSISSSQSHLDYTYSMLDAFVPLSDEENAQCKCKRGAQGQEGPRGPSGQKGEQ
GERGLRGPKGDRGSFDFLLLMLADVRHDIVHLQKKVFVGERPPKFDFDYALSKKKVKHKHRILQKQKLLEAYVNPLVEAT
KKPEPASRVAQAEAQATTERAIKVSTVPLTADTEEFRDFDMSNLDDHLENYDWSGEEMTDEDYF
Swiss-ProtCollagen and calcium-binding EGF domain-containing protein 1
SUPERFAMILYSSF57196  EGF/Laminin superfamily     
Gene3DG3DSA:2.10.25.10     
PfamPF01391  Collagen; Collagen triple helix repeat (20 copies)     
SMARTSM00179     
ProSiteProfilesPS50026  EGF_3; EGF-like domain profile.     
CoilsCoil
ProSitePatternsPS00010  ASX_HYDROXYL; Aspartic acid and asparagine hydroxylation site.     

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