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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO010855
PositionSeq_1101939:734271..740022[GBrowse]
sequence mRNA:
>DPO010855-RA
ATGAATGAAGAATACACTCAACAAGCTTCACAGTTCGTTTCGAGTATTCCTGGTCCATCAGAAGAGCAGTTTAGGTCTGA
TTCGTCCAAAGACCACAACTCCGAGGTGCTTATTTACAACATTTTTGCGATACCGGAAATTCGACGTTCTGCAAGATCAA
AACGCGAACCGCCGAGACCGGATGGCAACAGTAAAATTAGAACTAGCCGCGATGAATGGAAATATAATGATGCCAGCTCT
TCGGAGTCAGATAGTGAGAGAGAACGTCCGCCTCCAAGCAAACGCGTAGGCGCAAGATCCCGAGCTACTGCTCAAAAACG
GATCGTAACTAGGAAAACTAGATATAGTTCAGATGAATCTACTGATGGAGACTCGGAAGACGAAAAACGTCGAACGGTTT
CCAGACGAACAGCAGCCGCAGTTAGTTACAAAGAAGACAGTGAAGAGAAAACTGATTCTGAAGATTTAGTTGAAGTTGAC
CCATCAGAGCTAATTGAACCAGTCACGGAAGAAAAATGTGAGACCATTGAACGAGTTTTAGCACAACGGCGAGGAAAGAA
AGGAGTTACTGGAAATATAACGACCTGCTACTATGTTGAGGAACACGGGGATCTAAATGCAGACGTAAATCCCAATGATT
ATGAAAATACCGAATATCAATTTTTAATAAAATGGAAAGATTGGGCGCACATTCACAACACATGGGAATCTGAGCAGACT
CTTAAGGAACAAAAAGTTAAAGGGATCAAAAAGTTAGACAACTATATGAAAAAAGATGCCGAAATACAAAAATGGATCAG
CTACTCAACGCCGGAAGATGTTGAATATTATGAATGCCAATTGGAATTGTCGCAAGAGCTTCTGAAAAGTTATAATGAGG
TGGAAAGAATAATTGCCATGTACAATAAACCAGACGGAGGTACTGATTTCTTTGTGAAGTGGGAGAGTTTATCCTATGCC
GAGTCTACTTGGGAAGACTCTTTATTGATTCACAGAAAATGGCCGCAAAAAGTCCAGGAGTTTCAGGGACGTGAACAATC
AACAAAAACCCCTACAAAACATTGTAAAGTGCTAAAATACCGCCCTAAATTCCACGAGGTCAAAAGTCAGCCAGAATATA
TGATGGGCAAGGAAAACGCATTAGTTCTACGAGACTATCAAATTCATGGACTGAATTGGATGATTCATTCATGGACTAAG
GAAAACTCTGTTATTTTGGCAGACGAAATGGGTTTGGGGAAAACGATACAGACAATATGTTTTCTTTACTATTTATTTAA
TACCCATAACCTTCATGGGCCATTCTTATGCGTGGTACCCCTTTCCACGATGACCTCTTGGCAAAGAGAATTTGCCCAGT
GGGCTCCTGAATTGAACTTCGTCACTTATTTAGGAGACGTACAATCACGAGAAATTGATAAAGCCTTTTTGGGAAGTCTA
AGCTGGGCAGTTTTGCTAGTGGATGAAGCTCATCGGCTGAAAAATGATGATTCGTTGTTATACAAAGCTCTTATGGAATT
TCATACTAACCATCGCCTTTTAATCACCGGGACTCCTTTGCAAAACAGCTTGAAGGAACTGTGGGCGCTCTTGCATTTCA
TCATGCCAAATAAGTTTGTGACGTGGGAAGAATTCGAAAAAGATCATGAACATGCATCTACAAAGGGCTACTCAAAACTC
CATAAGCAGTTAGAGCCATTTATTCTGAGAAGAGTAAAAAAAGACGTAGAGAAATCGTTACCCGCTAAAGTAGAACAAAT
TCTTCGAGTTGAAATGACTTCAATTCAAAAGCAGTATTATAAGTGGATTTTAACGAAAAATTACAACGCTTTACGGAAAG
GTGTGAAAGGTTCATCAAACACTTTTCTGAATATTGTCATTGAGCTTAAGAAGTGTTGCAATCATGCTTTTTTGACGAAA
CCATCAGAAGCTGAACCACAATACACTTGTCAAGATAAATTGCAATCTTTATTGAGGGGTTCAGGAAAGTTGGTTTTACT
AGACAAGCTGTTAATTCGGCTTAAGGAAACAGGACATCGAGTGCTAATATTTTCTCAGATGGTGCGTATGTTGGACATTT
TGGCCGAATATCTACAGTTACGACATTTTCCATTCCAAAGATTAGATGGTAGCATTAAAGGAGATATTAGGCGCCAAGCA
TTGGATCATTTTAATGCTGATGGCTCTCCAGATTTTTGTTTCCTCCTGTCTACGCGTGCGGGAGGTTTAGGTATCAATTT
GGCGACAGCCGATACGGTGATAATTTTTGATTCCGACTGGAACCCTCAAAATGATCTGCAAGCTCAAGCAAGAGCACATA
GAATCGGTCAGAAAAACCAAGTCAATATTTATCGATTGGTGACAGCTCGAAGTGTCGAAGAAGAGATAGTAGAACGCGCC
AAACAGAAAATGGTCTTAGATCATTTAGTTATACAGAGAATGGACACTACGGGTAGAACCGTTCTGAATCAGAAAGCATC
TACCAATAATAACCCATTTAACAAAGAAGACTTAACAGCAATTCTGAAATTTGGCGCAGAAGAATTGTTTAAAGATGAAG
ATGTTGATGAAGAGCCTAATTGTGATATAGATGAAATTTTAAGAAGAGCTGAGACTCGGGACGAAGCCCCGTCAATGGTT
GGAGACGAGTTACTCTCTGCTTTCAAAGTGGCTAGTTTTGCAGCTTTTGATGAAGATGCCACTCCTTCTCCAGTACGAAC
GAAAAACGAGAATGACGAAGAAAGTAAAGATTGGGATGAAATTATCCCGGAAAACCTCAGAAAGAAAGTCGAGGATGAAG
AAAGGAATAAAGAAATGGAAGACTTGTACTTGCCACCGAGAAATAGAAAAACACTTCAGCAGATTAATCAGTCAGAGAGC
GATGGGGACGGCGCAGAACACAGGAAAACGAACAAAAAGGAAAACGATGAATCCGGATCCAGTATAGAGGGTGAGGAATC
AGATGATGAGAGACCAAAAAGGCGTGGGCGTCCACCTGTAGGGAACCGCGAAAAAATTAAGAATTTTACTGACGCCGAAA
TTCGCAGATTTGTAAAAAGCTACAAAAAATTCAGTGCTCCTTTAAAACGTTTGGAAGCCGTAGCGTGCGAAGCAGAATTA
CAAGAAAAACCATTGGCAGAATTACGGAAACTGGGCGAACTGCTTCATGAACGCTGTGTAGCATACATGAATGAACAGAG
CAAAGAGAATAACGACGCGAACAATGCCGATAATCAAGGCAAAAAACGGATAAGAGGACCTTCTTTCAAGCTCGGCGGTG
TATCAGTTAACGCAAAAACTATGATGCAGTGCGAAGAAGAATTAGCAGCCCTTGATGAACTTTTACCAACAAATGAAGAT
GAAAGAAATAAATGGATGCTTGAGGTCCGGACGAAACCCGCCCATTTCGATGTTGAATGGGGTGCAGAAGAAGATTCAAA
ACTACTGAGAGGCATTTATGTCTATGGTATTGGATCTTGGGAGCAAATAAAGCTTGATCCCTCTCTCAAAATTGGTGATA
AGGTCCTGTTGAACGAGGATAAGAAACCGCAGGCGAAGCACTTGCAGTCTCGAGCTGAGTATCTGTTGAAGCTATTAAAG
AAGCAACTCGATCCTAATAAAAAGGTTCAAAAACCTAAAAGACCTCGAAAAGCTAAAGAGATTAAAGACGCGAAATCTAA
GGAAATAGTTGATAATGATTTTAGCTCCAATGATGAATCGACATTACATAGTAGCCAGAGTGTGAGTAGTTCGACAGCGA
AAAAGGTTAAAGTACCCGTTGTCAAAAAAGAAATTAATAATGACAAAGATGCCGAAGACGTTGCAATTAAAAAGGAAAAG
AAAGAAAAGAAGAAGGCCAAGAAAGAAAAGAAGAGTGCTGGACCGATGCATTTCACTGCTAATAATGAACCAAAAGCCAT
CAACGTGTTAGGAGACTTGGACCCTGCAATTTTCACCGAATGTAAAGAGAGAATGAGACCAGTGAAAAAAGCTTTAAAAG
CTTTAGACAACCCTGATCAGTCAATGACGGAAAGTGAACAAGTCCAACATACTCGGGAATGTCTCATTCAGATTGGGGAA
CAAATCAATACTGTGTTAGGTCAATACACTGATGCTGAAAAAATCAAGGAATGGAGAAGTAATTTGTGGTACTTCGTGTC
GAAGTTCACAGAATATGACGCAAAAAAGTTGTATAAGCTTTATAAAAAAGCCAAAGCAAAGGATGCTAAGAAAGCGGAGA
AAAAAGAAAAATTGGAAAAGAAGGATCGAAATCGTGAACAGGTTGCATCGACTAGTAAGGAAAAGGACAGAACGCGGAAG
GATAGCGACAAAGAACCTCACTATCATCATCATCACAAAAGGAAGCACGAACCAGAGGAAAATAATGAGAGAGAGGAAAG
GCCGACTAAGAAACATCGGGATGGCACTGAAAAAAGAGAAAGACGTGAGAAACATCCAGATAAAGACCGTAAGCGAAATC
GAGAAGAGATCAGCACTGAAGAGGAAGGGGAATATCGATACAATCGTCATAGAACGGCACCGACTTTCAGGCATACTGCT
CCCCCCGTGCATTTGGAACATGAAAGATGGTCTGCTACTGGACTCCCTAGAGAACGGTTTCCCGGCGAGCATCCCAAAAG
GCCATTTAGTGATTATCCAAGAGTTCCAGGATATCACAGAGGAGAGCGCGACTACAACCGTGGAGACAAGCGGAATAGTG
CAGATAATGAGAAACGCACGTTCAAGTTTATTTAA
PEP:
>DPO010855-PA
MNEEYTQQASQFVSSIPGPSEEQFRSDSSKDHNSEVLIYNIFAIPEIRRSARSKREPPRPDGNSKIRTSRDEWKYNDASS
SESDSERERPPPSKRVGARSRATAQKRIVTRKTRYSSDESTDGDSEDEKRRTVSRRTAAAVSYKEDSEEKTDSEDLVEVD
PSELIEPVTEEKCETIERVLAQRRGKKGVTGNITTCYYVEEHGDLNADVNPNDYENTEYQFLIKWKDWAHIHNTWESEQT
LKEQKVKGIKKLDNYMKKDAEIQKWISYSTPEDVEYYECQLELSQELLKSYNEVERIIAMYNKPDGGTDFFVKWESLSYA
ESTWEDSLLIHRKWPQKVQEFQGREQSTKTPTKHCKVLKYRPKFHEVKSQPEYMMGKENALVLRDYQIHGLNWMIHSWTK
ENSVILADEMGLGKTIQTICFLYYLFNTHNLHGPFLCVVPLSTMTSWQREFAQWAPELNFVTYLGDVQSREIDKAFLGSL
SWAVLLVDEAHRLKNDDSLLYKALMEFHTNHRLLITGTPLQNSLKELWALLHFIMPNKFVTWEEFEKDHEHASTKGYSKL
HKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYNALRKGVKGSSNTFLNIVIELKKCCNHAFLTK
PSEAEPQYTCQDKLQSLLRGSGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILAEYLQLRHFPFQRLDGSIKGDIRRQA
LDHFNADGSPDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEEIVERA
KQKMVLDHLVIQRMDTTGRTVLNQKASTNNNPFNKEDLTAILKFGAEELFKDEDVDEEPNCDIDEILRRAETRDEAPSMV
GDELLSAFKVASFAAFDEDATPSPVRTKNENDEESKDWDEIIPENLRKKVEDEERNKEMEDLYLPPRNRKTLQQINQSES
DGDGAEHRKTNKKENDESGSSIEGEESDDERPKRRGRPPVGNREKIKNFTDAEIRRFVKSYKKFSAPLKRLEAVACEAEL
QEKPLAELRKLGELLHERCVAYMNEQSKENNDANNADNQGKKRIRGPSFKLGGVSVNAKTMMQCEEELAALDELLPTNED
ERNKWMLEVRTKPAHFDVEWGAEEDSKLLRGIYVYGIGSWEQIKLDPSLKIGDKVLLNEDKKPQAKHLQSRAEYLLKLLK
KQLDPNKKVQKPKRPRKAKEIKDAKSKEIVDNDFSSNDESTLHSSQSVSSSTAKKVKVPVVKKEINNDKDAEDVAIKKEK
KEKKKAKKEKKSAGPMHFTANNEPKAINVLGDLDPAIFTECKERMRPVKKALKALDNPDQSMTESEQVQHTRECLIQIGE
QINTVLGQYTDAEKIKEWRSNLWYFVSKFTEYDAKKLYKLYKKAKAKDAKKAEKKEKLEKKDRNREQVASTSKEKDRTRK
DSDKEPHYHHHHKRKHEPEENNEREERPTKKHRDGTEKRERREKHPDKDRKRNREEISTEEEGEYRYNRHRTAPTFRHTA
PPVHLEHERWSATGLPRERFPGEHPKRPFSDYPRVPGYHRGERDYNRGDKRNSADNEKRTFKFI
Swiss-ProtChromodomain-helicase-DNA-binding protein 1
KEGG     K11367     
SUPERFAMILYSSF54160  Chromo domain-like superfamily     
Gene3DG3DSA:2.40.50.40     
PfamPF00271  Helicase_C; Helicase conserved C-terminal domain     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil
ProSitePatternsPS00598  CHROMO_1; Chromo domain signature.     

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