Warning! We strongly recommend Internet Explorer (9.0 and later) and Google Chrome for better display.

Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO010665
PositionSeq_1102813:39108..53288[GBrowse]
sequence mRNA:
>DPO010665-RA
ATGAGCAGCAGGGGGGAAGAGCCCCACAATAGGGGCTCGTCGACCAAATCAAGCATTCAAGAAAAAGTAGGCACGTTGTT
CTACAGCATTGGGCTGCTATGCAGCAGCTACCCCACTTCAGTGTTGGCGTTCGCCATTGCCATTATCGTTGGTTGCTGCA
TCCCCTTGGTGAACATTCCTTTGCCATTGACGTCGCCTAAACAGGAATGGGTGTCGGACGGGAATGTTACTGGCGCCCCT
TTTTGCTACATTCAGCAAGTGGTCTTAAAAGTCGCAGTTTTGCCTTGGGACGCCGATTTGCGACTCGGAGATGGATTTAG
AGCGCCTCTTTACGAGTCCTTCAAACTCCTGGATATCGTGCGAAACTACCAGGACAAGGACAGCTTCAAGACATTGGGAC
ATGTGTGTTTGCACATTGAAGCTGTTGCCAACAGCAAGACCGGCTCCAGCTTGCTGATGCCCCAATACAGCTGCCTCGTG
CTGTCGCCAGCCAACTTTTGGCAGCAGGACATCAACCAGTTCAGCCAGGACAGCGCGATTCTTACCAACATATTCAGCCA
TCATCGATACCACAAGGGCAAAGTGTCGACGGCCGAGGTTTTATTCGGCATGCCATTGAGAGATACCGGAATCAAACGGT
ACCCTCTTCGTCACCGGCAGAGGATCATTCAGTTTGCTGTTACGCTCTTTTTTAAGGATTTCGACCGAGGGTTTATACAG
GGGCTTCAAGAAAAGCTGATTTCCGTTTACCCGCTTCATCAGAATGGCAGCAAGCTGACGGCCGCGCTAAACGACACCCT
AATCATCCACTACCCTGAAGAGATTGATTACTTCGAACTAGCCCCTATCGTGGCAGCTTTCCTGCTCCTGTTCCTCTACT
ACTATTTCTATGTGCGAAAAATCGACGAAATCAAGTCGAAAGCGGGTATGTCTTTTGCGGCAACCATCACCGTGTTGTGC
AGCCTGCTGATGACCATGGGCGTGTGCTTCATCTTCGGCCTGGCCGTCAACAACCAAAGAGGCAAGTGGATATTTCCCTA
TCTGGCCATACTGTTCGGGCTGGAGAACGTTCTGGTTTTGACTAAAAGTGTGCTGATGACTCCGCTGCACTTGGACGCGA
AAATCCGACTAGCGCAAGGCCTGAGCAAAGAGGGCTGGAGCACGACGAAGAACCTCTTGATCGAAATAACGATTTTCACC
TTTGGACTGTTCACGTTCGTGCCGGTGATTCAGGAGTTTTGCATCTTCGCCCTTGTCAGTCTGGTTGCCGGGTTGTTCTT
GCAGATATTGTTCTTTTCCACTGTGCTCGGCATCGATCTGCACAGAGCCAGCACGACGATAGAGAAAACAAGCTTCAGAA
ACGCTCTATATCAACCGCTAGCCACTGGGGAAAGCGCCAGCTTTGTAACGAAGGGAATGAGTCGCTCCAGGTCACATCCC
AGGCTGAGTTTTCCTGCCAATGTGGTTGCTGCGCAAAAGCACAACGGCAACCAGGACAAGAAAATCCCAAAACGGTTGAG
GATGGTGAATATTTGGGCGCGCACGCGACTCTTCCAACGCTCCTTTATGGTGCTGATGGTCGTGTGGATCTGCATGATTA
TTTACAACAGCGACATCATCAACAACTACTTCTTGAGCACGAGTGAAGATCGCCACAATCAGAGTGGGGTGCAGTTTCAG
AAGAACTACCTCAACCTGAACTTTTTCCCCGATATCAACACGACGCGAACGTTGAATTTCGTCACCTACAGCCCGTTAGA
GATGGATGCGGCCGCCAGGCACAACCAATCGTTTGAGGTCGACAGGCTGAAGCCGTCCGGGTATTCGCCGTGGCTGAAGC
TGTCCTCCAGCCATTGGTCGGGCATTTTGAGCAACTACAACCTGTCGCTGAGCGGACAGAGCGTGGTGATTTTGCCCAGC
ATCAAGTTGGCGCATGTGATCAGCCCCCAACAAGCCGTTTTGCTGAGGAATCCAGACGAAAAGTACGGCAACAAGATGCA
ATGGCAGGCGCTTGCCATGGCTTTGGATCCCATCGATTTTAATGGAGATGACTTTCCAGCAATAGACCAAATAGAGCAGC
CGCTCTATCCAAGATCCCCAATGGAAATCGCACTGTTGTCGATTCTGATCTTGATCAGTGTCATAGTGATGACATACGGC
TTCGTCGTGCTTTATAAGTGTATTTGCTCAAGAAATTACGCTGAATGGCGCGCCTCTTGGTACCCGGAGAAGAACGAAGA
TCTGGTTGATGAACAGTTTATGCTTGAAGCAGTTCCTGTAGTTCTAGACGGGCACATTCAGGAAGTTGAATGCATAGCAA
CTGATGGCGTTCATCTAGCGAGCGTTTGCTTGGGCGGTCAGCTGAAAATCTGGGACAACAACACGGGGGAAAGCGTGGCA
GTGATCGACCGCAAAACCCATTTTGGCCTGAACAACAACGAAGCCCCAAAGGGCTTCGAGCAGCCGGATGATCCATCAGA
TTGCGAATCGAGCTGGCCGCCCATCGACGCGGCGTTCTCTCCCTATACGGGCAGGATCAACACGAACTTTTCAAGCGTTC
GGCTGCGTACTTTTCGAGAAGCAACCGACTGGATGAGCGATATGTCCAAAATTCTTCATACGCCCTATAGCCGCTCGAAT
TCAGAAGACAGATCGGGCGGCTCAAGTCGCAAAACGAGCGATTCGACTGGGGGTAAACTGTCCTCTGTATGGGCAATGGA
TTATGTTGATAACTTAGTTATTATTGGATGCGCCGATGGCAGGTTGGAGCTATGGGAAGCGACTACTTGCAGACTGAAGT
GTGTTTTCGAGGACGGCAACGAATCAGGCATCACCAACCTAAAACTGATTGGATCGCGTGTGATTGCAGCCAGATTGTGC
GGTTCTTTGGACTTTTTGCAGCTGCAAACGTTCAATCAGGGCAGGCCGGTGGACTGGAACTTCACCTGCGCCTATAGGAG
GACGCACATCCGAACAGGCTCGATGGGTTCCATACCAGAGCGCCACGTACAAAATCAAAGTGATCCGGACGAAGAGTTGC
GATGCATCAAAGTGCTGAGCGTCAAGGCGCATCAGCAGCCAATCACCTGCTTGGACTGCGAAGGCGGGCGCATAGTGAGC
GGCAGCCAAGACCACACCTTGAAAGTCTACAGAGTGGAGAATGGGGATCGCCTCTACACTCTGCATGGACATTGCGGGCC
AATCACGTGTCTGTTCATTGACCGAGTGTGTCCCGCCACATCGGGAAGCGGCTCCCAGGACGGAATGCTGTGCGTTTGGG
ATCTGTTGTCAGGTACTTGTATGTACAGCATTCAAGCCCACGATGGCTGCATCAGCTCGTTGACTTACTCGGCAAGTTAC
GTAATCTCATTAGGGATAGATGAGAGGCTCTGTGTGTGGGAGCGCTTTCAGGGCCATCTGTTAAACACCATCGTAATTGG
CCAGGTGTTCTCCAATCACATCTTAATGTTGGCCCCCCACTTAGTGGTAACCGGGCGAAATGGGGGGCTGGTGATTTGGG
ATGTGCGCAATGGTGACTGTGTTCGGACTATAACACTGGGCCGAGAGCCGTTCGTGTTCATCAAACAGTTGATTCTGTTG
AGGGACGCTGTTTTGTGCGACTACGGCAAACAGTTGCGCATTGTGCGATTCCCACTAATCACCCACAAGTTTGACTAGAA
TGGACTGTCTTTCCGGGAACATCGAACAAAACTGAGTGATACGACGTAGCTATTAATTGAACGGTTTGTGATAAAATTGA
CGCTATTTTCAGACAAATCTAACTTAACAATGCAACTTTTAAACTATTTTACCTGATGCTTTCAAGTGTTTTTGTCTTTT
TATAAGGTGTTTTAATTTGTCAGGTCAACAGAGATCGGTAGAATTAA
PEP:
>DPO010665-PA
MSSRGEEPHNRGSSTKSSIQEKVGTLFYSIGLLCSSYPTSVLAFAIAIIVGCCIPLVNIPLPLTSPKQEWVSDGNVTGAP
FCYIQQVVLKVAVLPWDADLRLGDGFRAPLYESFKLLDIVRNYQDKDSFKTLGHVCLHIEAVANSKTGSSLLMPQYSCLV
LSPANFWQQDINQFSQDSAILTNIFSHHRYHKGKVSTAEVLFGMPLRDTGIKRYPLRHRQRIIQFAVTLFFKDFDRGFIQ
GLQEKLISVYPLHQNGSKLTAALNDTLIIHYPEEIDYFELAPIVAAFLLLFLYYYFYVRKIDEIKSKAGMSFAATITVLC
SLLMTMGVCFIFGLAVNNQRGKWIFPYLAILFGLENVLVLTKSVLMTPLHLDAKIRLAQGLSKEGWSTTKNLLIEITIFT
FGLFTFVPVIQEFCIFALVSLVAGLFLQILFFSTVLGIDLHRASTTIEKTSFRNALYQPLATGESASFVTKGMSRSRSHP
RLSFPANVVAAQKHNGNQDKKIPKRLRMVNIWARTRLFQRSFMVLMVVWICMIIYNSDIINNYFLSTSEDRHNQSGVQFQ
KNYLNLNFFPDINTTRTLNFVTYSPLEMDAAARHNQSFEVDRLKPSGYSPWLKLSSSHWSGILSNYNLSLSGQSVVILPS
IKLAHVISPQQAVLLRNPDEKYGNKMQWQALAMALDPIDFNGDDFPAIDQIEQPLYPRSPMEIALLSILILISVIVMTYG
FVVLYKCICSRNYAEWRASWYPEKNEDLVDEQFMLEAVPVVLDGHIQEVECIATDGVHLASVCLGGQLKIWDNNTGESVA
VIDRKTHFGLNNNEAPKGFEQPDDPSDCESSWPPIDAAFSPYTGRINTNFSSVRLRTFREATDWMSDMSKILHTPYSRSN
SEDRSGGSSRKTSDSTGGKLSSVWAMDYVDNLVIIGCADGRLELWEATTCRLKCVFEDGNESGITNLKLIGSRVIAARLC
GSLDFLQLQTFNQGRPVDWNFTCAYRRTHIRTGSMGSIPERHVQNQSDPDEELRCIKVLSVKAHQQPITCLDCEGGRIVS
GSQDHTLKVYRVENGDRLYTLHGHCGPITCLFIDRVCPATSGSGSQDGMLCVWDLLSGTCMYSIQAHDGCISSLTYSASY
VISLGIDERLCVWERFQGHLLNTIVIGQVFSNHILMLAPHLVVTGRNGGLVIWDVRNGDCVRTITLGREPFVFIKQLILL
RDAVLCDYGKQLRIVRFPLITHKFD
Swiss-ProtSterol regulatory element-binding protein cleavage-activating protein
SUPERFAMILYSSF69322  Tricorn protease domain 2 superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF12349  Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation     
SMARTSM00320     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

You might be interested in these researchers

You might be interested in these references