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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO010554
PositionSeq_1102735:29397..34748[GBrowse]
sequence mRNA: 
>DPO010554-RA
ATGGCCGAAAATATCGGCGGTTTTAATGCTGCAGACGATTTTAATATGTCCGATCTGGTGGAAATCGATGATATAATAAA
AAATGAGTTATTTGAACAAGAATTGTTGTCCCACCTGGACGAATTCCCCATCGATTTCGACTTGGAAGGCATGAAAAACG
ACGCATTTTTGAACCCGGAAGCACTGTCCTCAAATGATAGTGCCTATCAGAGTGATTCGCCTTTCAGTGTGGCCGTTTCA
CCTCAACTGTCGCCCGACTATCGCCAACAGCCGCGCTACCAGCTTGTAAATCCTCCGACGCTCCCTCAAAGTACCGCCGC
CATAAATCAACCTCCACAAACCGTCATAATATCGTCGGCTGCGGTGCCTCAAAACCCTTCTCATGTTGTGTACAGCACTT
TGCCTATTCATACGAATCAGCACATCATCGTCCAACAGCAATCAATGCCCAGCAAGAAGAAATCAAGTGCTAAGCAGCAG
AGCAGCACAGGGCCGATGATTATCCAGAATGTTGGAAACTTGTCCGCCGATCAGGTTACTCCAGTGGTGTTACAGGCTAA
ACTGATTACATCGGAGAGTAGTTTGGCGAGTGCCCCAGTCATGTACACTACCGCCAGTCCATCTTCATCTCTGCACACTT
TACTCGGCAACCCCCAAATACTCACCACAGCCGGAATACCCGTTAGGATCGATTCGGAAAATAAGGTGGCCATAAACCGA
ATGCCACCAGTCAAGGAGGTGAAAGTGAAGGAAGTGAAAAGAAGCGCACACAATGCCATAGAAAGAAAGTACCGGACAAG
CATCAATGACAAAATCGTCGAACTTAAAAACATTGTTGTGGGAGAGGAAGCAAAGTTGAACAAGTCGGCGATTCTTCGAA
AAACCATCGACTATATCCGGTTTTTGCAAAACTCCAACGCCAGATTGAAAGAGGAAAACATGGCCCTTAAAATGTCGACC
ACCCAAAATACCCTCAAAGGCCTGCTCACTAATAACGTTAACTACGATCCAGAAGATACGCCGCCTCATTCGGATGTTTC
ATCCGAGCATTCATCGCCTTCTAGCCCGGAATTCTCTACCATGGTTAAAGATGATAGCGATGATGAGGTATTGCCCAATT
CCAAAGGAATGCTGGACCATTCCAGGCTGACTTTGTGCATTTTCATGTTAGCCATGGTGGCTTTCAATCCGTTTGGTTTC
GCGTTGAAAAAAATTTCTAGCGCTGAAAGCATCAGCATTCCCAGCGGAAGGTCTATGCTAGCATGGAACGAGCGGCAAAC
TGTGTCATTTTTTCCTTCATCTCTCATGCTGTGGATTGTGAATATCCTGATTTTATGGTTCTGTCTGGTGAAAATGTTTG
TCCATGGCGATCCGATATTATCCCAAAAATCCAGAGAAGCCAACAAGTACTGGATCCACCGGAAACAGGCTGATATTCAT
CTCCTTGAGGGCGATAAATTCGGGGCGAAACAAGAACTTCTGCGGGCCTTGCAAGCATTTAACATAACTTTGCCCACCAG
TCGGTTGGAATTGTTCTTGTGCTTCTTTTGGCAACTGTTTAGACAAGTGATGCATAGGCTATGGATTGGGCGCTATTTAT
CCAGGCGAGCTGGCGGTTTTTATATGAACGGGCATAAGAGATTCGAATGCAAGTCGTCCTGCCAACAGCTGGCCTTAGTG
TTCAACGACCTACATAAGGTCCAGCTAATGCAAGGCCCTGAGGAAGCGTGCCATTTATTCGGATTAACCACCTCACTGAA
TGCTCTCAACCTTGCAGAAGCTGCCAAAGGCCGAATAAAGCCGGCAGATATGATCGACATTTACATCGGAGTAGCTTTGC
GAGTCAAGGCCAGCTTGCCCGGATTTTTTCACATTGTTTCTAAATACTACTTGGGCCTGGCAAAGCTTGCTTCGATCAAC
TCTTGCGACCCGATACCGCTGAGACTCAAATGGCTGTTTACGCCCTACGGCTACAAATTCATGTTGTCCTTCAAGTTTTC
TGAGCAGTACAAGTCGAAGAAGCTGCCCTTTACTAGACTAGGAAACAATGTGGATCCTCTTATTCAACTAATGAAGGCAA
AAAAGGCTTTATCAATTCTGGTATCTCCCGGTCAGAAGAGCGAACTGAGTCAAGATAAGAAAACCGACTTGAACGACGCG
CTGACTTATCTGGAATTGTTGAACGACAATACCACAGTTGAGGCAGCCACGGTTTTCCAGAAAAGCTCTACATCTTACAA
AGACCATGTTGCTGAATGGTGGGCGACCTTCATATCCATAGCCTGTTATTGGCTGTTGCAAGAAGAGGACAATGCTGCGA
AGCTGTACAAAAAGCTGGAAAATGTGCCGGAAGCTTTAACCTCCCTTAACGATCCTCTTCCGAAGGCGGTTTTAGCAGCG
TATATGGCGCGAAGGAGATATTTAACCATGAGTTTGAAGACGTCGCCAAAGCAAATCGAGCAACAGTGCGAGTACGCCAG
TCAATTGTTGGCGGACAGTTTAACTTACAGCAGTTGCAAGAAGGAGGATAGTTTGATCTTGTTATCGCAGTTAGTCGTAT
GTGACTGGCTATTGGAGACAAAAACCTCGCTTTGGGAAGATTGCGTGGAGGATGGCGCAAAGCCGCCCGCTTCCAACAAT
TGCATGTCGTCCTTCAATAAGGACTTAGCTTCGCTTCGATCCCTCACTCAGCATTTGCCATTTGCTTTGTCAAGAGTGTT
TCTATATGAAGCCACGTTGAGACTGATGGCGGGTGCAGCTCCGGGCAGAACCCAGCAACTGTTGGACAGAAGTCTTCGAC
ACAGACATGGAAAATCTTCCATTATCTGTGGAAAGAGTGATAAAGGTAATCAGGAAATGGGCAGCGATAGACAGCACGCC
ACTGCGTTGTATATGGCCTGCAAGCACCTTCCTGGTCAGTTGCTTTCGTCGCCAGGCGAAAGAGCGGGCATGTTAGTGGA
GGCCGCCAAAATTCTGGAACGAATTGGCGATCAGAAACAGTTGCAGGATTGTTATAAGTTGATGAAAACCTTAGGCACGA
ATGCGGTTATTACTAATTAAGTAGTAAAAAGCTGTGAGCGGAATGCAAGACTAAAGTGATTAAGTTTGCAGATAGTTGAT
ATCGGTAAGTTGTTTTTATTTATTAAATCGATAATTTTTTATATTGAAGTTTGACGTATGTTGTACTATATTAAGGGATT
TTTGAATAAAAATCCGTTTGATCTGATTTTAACCAAA
PEP: 
>DPO010554-PA
MAENIGGFNAADDFNMSDLVEIDDIIKNELFEQELLSHLDEFPIDFDLEGMKNDAFLNPEALSSNDSAYQSDSPFSVAVS
PQLSPDYRQQPRYQLVNPPTLPQSTAAINQPPQTVIISSAAVPQNPSHVVYSTLPIHTNQHIIVQQQSMPSKKKSSAKQQ
SSTGPMIIQNVGNLSADQVTPVVLQAKLITSESSLASAPVMYTTASPSSSLHTLLGNPQILTTAGIPVRIDSENKVAINR
MPPVKEVKVKEVKRSAHNAIERKYRTSINDKIVELKNIVVGEEAKLNKSAILRKTIDYIRFLQNSNARLKEENMALKMST
TQNTLKGLLTNNVNYDPEDTPPHSDVSSEHSSPSSPEFSTMVKDDSDDEVLPNSKGMLDHSRLTLCIFMLAMVAFNPFGF
ALKKISSAESISIPSGRSMLAWNERQTVSFFPSSLMLWIVNILILWFCLVKMFVHGDPILSQKSREANKYWIHRKQADIH
LLEGDKFGAKQELLRALQAFNITLPTSRLELFLCFFWQLFRQVMHRLWIGRYLSRRAGGFYMNGHKRFECKSSCQQLALV
FNDLHKVQLMQGPEEACHLFGLTTSLNALNLAEAAKGRIKPADMIDIYIGVALRVKASLPGFFHIVSKYYLGLAKLASIN
SCDPIPLRLKWLFTPYGYKFMLSFKFSEQYKSKKLPFTRLGNNVDPLIQLMKAKKALSILVSPGQKSELSQDKKTDLNDA
LTYLELLNDNTTVEAATVFQKSSTSYKDHVAEWWATFISIACYWLLQEEDNAAKLYKKLENVPEALTSLNDPLPKAVLAA
YMARRRYLTMSLKTSPKQIEQQCEYASQLLADSLTYSSCKKEDSLILLSQLVVCDWLLETKTSLWEDCVEDGAKPPASNN
CMSSFNKDLASLRSLTQHLPFALSRVFLYEATLRLMAGAAPGRTQQLLDRSLRHRHGKSSIICGKSDKGNQEMGSDRQHA
TALYMACKHLPGQLLSSPGERAGMLVEAAKILERIGDQKQLQDCYKLMKTLGTNAVITN
Swiss-ProtSterol regulatory element-binding protein 1
KEGG     K07197  SREBP1, SREBF1; sterol regulatory element-binding transcription factor 1     
SUPERFAMILYSSF47459  HLH, helix-loop-helix DNA-binding domain superfamily     
Gene3DG3DSA:4.10.280.10     
PfamPF00010  HLH; Helix-loop-helix DNA-binding domain     
SMARTSM00353     
ProSiteProfilesPS50888  BHLH; Myc-type, basic helix-loop-helix (bHLH) domain profile.     
CoilsCoil

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