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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO008398
PositionSeq_1102915:617625..624356[GBrowse]
sequence mRNA:
>DPO008398-RA
ATGTCCATAATCCTTGCGCGCAAAACGCCGTTTGCATCAACACCAACCACGGATGCGACTGCAGCTGCCAGGAGGGATAC
CAAGGGAATGGTTTCGTCGGTTGTGCACCTGGTGAGGCACATTGCCGATAACGGTCCCCCAGTTTGCCAATACAACGAGG
ACTGTCCTCCGAATAAACTCTGCGATCGTTTGAACAGAAGATGCATGAATCCCTGCTTTGAAGACTCTTGCGGAGAGAAC
GCGGAGTGCGTTCCCAAGAACCATGGGGCGACTTGCGTCTGCCTGCCAGGCTATGAGGGAAACGCCTACGTGGAGTGCCT
AGGAGTCTTAGGATGCAGACGCGATGAGGAGTGCGCTTCTAACGAAGCCTGCCTCAACCAGCAATGCGCCTCACCATGCA
ACTGCGGAATCAACGCCATATGCGACGTGATCCAGCACAAGCCCCAATGCCAGTGCCCCCCAGGGTATCAAGGCGATGCG
CGAGTGTCTTGCCAACCGCCCTCTGATCCATGCGACCCCAACCCATGTGGCACCAACGCGCTTTGCGAGCTGGACAATGG
AAACCCCATCTGCTTCTGCCCGAAGGGCCTCACTGGAAACCCATTCAAGAACTGCACGCTTTGTTTCCAGTTCCAGAAGG
CGATGAGTGTTCCCCGAATCCTTGCGGCCCCAACTCCGGCTGCCGAGTGGTTGGAGGAAACGCCGTCTGCTTCTGCCTGC
CGGAGTTCGAAGGCACGCCCCCCCAAGTGCCATGCAGTTTGCCCAGCAATCCATGCGATCCGTCGCCCTGCGGGCCCAAC
ACTCAATGCTCCATATTGGCCAACGGCTTTGCCAAATGCACCTGCCTGCCTGGTTTCCTGGAGAGTCCCAACACCATCAG
AGGTTGCATCGAGAGCAGAAACCCTTGCGAGCCCAACCCGTGCGGGGCTGGCGCCCTTTGCGACCCGCACGGGGAGCCTG
TGTGCTCTTGTCCCTATGGAACTAATGGAAATCCCTTCCGGGGCTGCGCCATTGAGAAGCCCTTGTGCAGTCCGGGGCCT
TGTGGGGCTAACGCGGATTGTTACAACTCCAACAACGAGGAACAATGCTTTTGCCGGGCATGGGAGNTATGAGTGCGTGG
TGGATGAAAACTGTGGCGATCACCAGGCCTGCATTTCGTACAGATGTCGGGATCCTTGCCCAGGCTCGTGCGGAGTAAAC
GCCGATTGCCGCGTGGAGAAACACCATCCTGTCTGCTCTTGCCAGTCTGGGCTAACGGGAAATCCTGTGATTAGGTGCTT
CAAGATACCGGAGATTCTTCCGCCACATGACCCGTGCATGCCCAACCCCTGCGGGCTGAACACTGTGTGCCAGAGCATCT
CCAATCGCGCTGTTTGCTCCTGCCTACCAGACTTCCATGGGGATCCGCAGATCGGCTGCCAACCCGAGTGTCTGATCAAC
TCGGACTGTCCGATTAACAAGGCGTGTTTGGAGCGACATTGCAAAGACCCGTGCTCGCAAGGACAGCTGTGCGGAGTGAA
CGCCTTCTGCCAAGTTAGAGACCATACAGCAGCCTGTCTGTGTTTGGAGGGATTTATCGGAGACCCGTTCTTGCAATGCA
TCCAACCTCCCATTGAAGACACACCCAAGCATACCAACACCTCGATCCAGCCCTGCACGCCTTCGCCTTGCGGCAATATG
GAGTGCAGCATCTACGGAACGCAGATTGCTGTTTGCGACCCGTGCTTGGGCCCGGAGGCCGTCTACAACCCTCAGTGTCG
GCCGGAGTGTTTGACCAATGCGGACTGTCCGTTCCACCAAGCCTGTATGCGGTTCAACTGCATCGACCCATGTCCAGGCT
CATGCGGAGTGAATGCTGTTTGCTCTGTGGTTTCGCATACGCCCATCTGTAGCTGTCCGTATGGACTGGTCGGAGACCCG
TTCCAGCAGTGTGTTCCTCTGACGATTGATTCCCCCAAGGACAGTTGCGACTACCCGCGGTGCGGAGTGAACGCCGACTG
CCTAGAGAAAGGAACCGGGGTGATCTGCGTTTGCAAGCGGGGCTTCTTCGGAGACCCCTATCTGGCCTGCCGCCCCGAAT
GCGTTATCAACCCCGATTGCCCATTGGACAAAGCGTGCATAAACGCCAAATGCTCCAGCCCTTGCAGCGATGTGTGCGGA
GTGGGCGCTCAATGCGACGTGGTCAACCACATCCCCATCTGCTCCTGCCCCCCTCAACATACAGGAGATCCGTTTGTGGC
CTGTTACAAGGCTGTAATCCCCAGCCTACCGGCGCCGGCGCCTCAAAACCCTTGCGACCCGACGCCTTGCGGCCCCTACA
GCCGCTGCTCGGTTTCGCATCAAGGATACGCCACCTGCTCTTGCCTGCCCAACTACCAGGGCGTAGCCCCCGCTTGTAAA
CCCGAGTGCATTTCAACATCAGAATGTCCCCAAACGAAGGCCTGCATTAATCTGAAATGCGGCGACCCGTGCGCAGGCAC
TTGTGGGTCTGGAGCGGTTTGCACGGTGATCAACCACAACCCGATCTGCAGCTGTCCAGAAGGACTGGAAGGCAATCCGT
TCTTGAACTGCCGCCAAGCGCCCGTGGTGGAAGAACTGCCATCTACAACTGAGGAACCGATAAATCCATGTGTGCCCACT
CCGTGTGGCCAGAACTCGATCTGCCAGATAAAGGAGAGCCGGCCAGTGTGTTCCTGCATAGCGAATTACATTGGCAGCCC
GCCCTACTGCAGGCCGGAATGCATGCTCAGTCAGGAGTGTCCTCAACATCAAGCTTGTGTGAACGAGAAATGCGTAGATC
CGTGCGTGTCCAGCTGCGGACCGAATGCTCAGTGCCATGTAGTGGGGCACAATCCGTTCTGTAGCTGTTTATCTGGATTT
GAAGGCGATGCTTTTGTCGGCTGCACCAAAGTGGCTGTGGTGGCTGTAGACCCGTGCAACCCATCGCCCTGCGGGGAGAA
TTCCCAGTGCTCTGTAAGCGAGGGAGCGGCGAAGTGCGTCTGCATTCCCCCCTACATCGGAAACCCCTACTCGGGAGGCT
GTAGGCCTGAATGCACCATCAACTCCGAATGTGCCACTCATCTGGCCTGTCTGTCGCGCCATTGCCGAGACCCTTGCCAG
GGACTCTGCGGCATCAATTCCGAATGCAGCGTCTTCAACCACGTGCCAGTTTGCACTTGCGCCAGAGGCCTGGTCGGAGA
CCCGCAGACCGGGTGCAGGCCACCTGCAGTGGTCGAGAGGCCCAAGCCATGCGAGCCGTCGCCGTGTGGACCAAACAGCG
TCTGTCGCGAACGCAATGACAAAGCAATATGTTCGTGCCAAGTGGGGTACTTTGGACAGCCGCCCAGCTGCAGGCCCGAA
TGCCTGGTGAGCTCCGAGTGCAGCTCAGACCAGGCCTGCATTAATCAGCGCTGCCAGGATCCCTGTCCGGGGACATGCGG
CGCCAGGGCCCGATGCCAGGTTGCCAACCACAACCCGATTTGCAGCTGCCCGCCCAACTACGTCGGAGACCCTTTCATTG
TCTGCAGACCAGAAGGTAAAAGGCTTCCTGAGCCCAGTGAACTGCTCAGCAGCTCAATGCATTTTCAGAGCGCGGGGAAC
CAACGCCCACTCCAACTCCATGCATACCATCGCCGTGTGGGCCGAACGCGGACTGCCAACCACTCAACAATCGCGCAGTG
TGCTCGTGTCTTCCGGGGATGTTCGGCATTGCGCCCAATTGCCGTCCAGAATGCTCCATTGACCAGGACTGTCCACTCAC
CTTGGCCTGCACCAATCAGAAGTGCAAGGATCCATGCGCGGGTTCTTGCGGCTTCAACGCCGAATGCAGCGTGGTCAACC
ATCGGCCCATCTGCAGCTGCCAGTCAGGGTTTGAGGGCGATCCGTTCTCCGGCTGTAATCCAGTTGCCGGTAAGTTTTTT
GGGCATCTGCCGCAGTAGAGGACGTTGTTATTCTATTCCGCCTCTTGTAGTAATTGAAGAGCCGCGAAACCCCTGCAATC
CATCCCCGTGTGGTTCAAATGCCGCATGCAAAGAGCGTGCTGGTGTCGGCTCATGCACTTGCCTAGTCGGGTTCTTTGGG
GACCCCTACAACGGGTGTAGACCTGAATGCGTAACGAGCAGCGAATGCGCCCACACTAAAGCGTGCCTGAACATGAAATG
CACCGACCCCTGCCCTGGAACATGTGGAGTGAACGCCAAATGCTCCGTGATTAATCACATTCCCCAATGCTACTGTCCCT
CAGGATTCTCTGGGAATGCGCTCAGCATCTGCCGCGAGAACGTGCCTTGTAAGGACCCCAACCAACAAGCCCCAACCTGC
GTGTTTAACAGTTTTTCAACCGTTTCAGTGGTGTTTGAAGAACATAAACGCAACCCCTGTGTTCCCTCGCCCTGTGGCCC
CTACAGCGTTTGTCAGATTAGTAACGATCGGCCTGTTTGTTCATGTGCGGCTGGTTACTACGGCGCCCCGCCCACTTGCA
AGCCCGAATGTATCGTAAACTCCGAATGCACTCAAGACAAATCGTGCAATAATCAGAAATGCGTGGATCCCTGCCCGGGA
ACATGCGGCATTAACGCCCTCTGCCGAGTGGTCAATCATAGCCCCATTTGTAGTTGTCCTACAAGTTTCACTGGGGACCC
ATTCGTTCGATGCCTTCCAGAAGAAAAACGTCCAGTTGATGTCGAAAACCCCTGTCTCCCCAGCCCTTGTGGCACATTTT
CGGAATGCCGAGTTGTAAATGGGCGGGCCAGATGTTCTTGTTTGCCCAACTACTACGGTCAACCCCCCAATTGCAAGCCA
GAATGCGTGGTTAACTCAGAATGCTCCCCCAGTAGGGCGTGTGTTAACCAAAAATGCAAAGACCCTTGCCCAGGCTCTTG
TGGCGCCAACGCCCAATGTAGCGCAGTGAATCACGTCCCAGTCTGCTACTGCTTGGCAGGATTCACTGGAGATCCATTCT
CCGGATGCCAGCAATGTAAGACCAGCAGACAATGGATGTCACGCCCAGAGAGGAGCCGCCCCACCCTTGCAACCCTTCGC
CTTGCGGCTCCAACGCCAATTGCAAAGAGCTGA
PEP:
>DPO008398-PA
MSIILARKTPFASTPTTDATAAARRDTKGMVSSVVHLVRHIADNGPPVCQYNEDCPPNKLCDRLNRRCMNPCFEDSCGEN
AECVPKNHGATCVCLPGYEGNAYVECLGVLGCRRDEECASNEACLNQQCASPCNCGINAICDVIQHKPQCQCPPGYQGDA
RVSCQPPSDPCDPNPCGTNALCELDNGNPICFCPKGLTGNPFKNCTLCFQFQKAMSVPRILAAPTPAAEWLEETPSASAC
RSSKARPPKCHAVCPAIHAIRRPAGPTLNAPYWPTALPNAPACLVSWRVPTPSEVASRAETLASPTRAGLAPFATRTGSL
CALVPMELMEIPSGAAPLRSPCAVRGLVGLTRIVTTPTTRNNAFAGHGXYECVVDENCGDHQACISYRCRDPCPGSCGVN
ADCRVEKHHPVCSCQSGLTGNPVIRCFKIPEILPPHDPCMPNPCGLNTVCQSISNRAVCSCLPDFHGDPQIGCQPECLIN
SDCPINKACLERHCKDPCSQGQLCGVNAFCQVRDHTAACLCLEGFIGDPFLQCIQPPIEDTPKHTNTSIQPCTPSPCGNM
ECSIYGTQIAVCDPCLGPEAVYNPQCRPECLTNADCPFHQACMRFNCIDPCPGSCGVNAVCSVVSHTPICSCPYGLVGDP
FQQCVPLTIDSPKDSCDYPRCGVNADCLEKGTGVICVCKRGFFGDPYLACRPECVINPDCPLDKACINAKCSSPCSDVCG
VGAQCDVVNHIPICSCPPQHTGDPFVACYKAVIPSLPAPAPQNPCDPTPCGPYSRCSVSHQGYATCSCLPNYQGVAPACK
PECISTSECPQTKACINLKCGDPCAGTCGSGAVCTVINHNPICSCPEGLEGNPFLNCRQAPVVEELPSTTEEPINPCVPT
PCGQNSICQIKESRPVCSCIANYIGSPPYCRPECMLSQECPQHQACVNEKCVDPCVSSCGPNAQCHVVGHNPFCSCLSGF
EGDAFVGCTKVAVVAVDPCNPSPCGENSQCSVSEGAAKCVCIPPYIGNPYSGGCRPECTINSECATHLACLSRHCRDPCQ
GLCGINSECSVFNHVPVCTCARGLVGDPQTGCRPPAVVERPKPCEPSPCGPNSVCRERNDKAICSCQVGYFGQPPSCRPE
CLVSSECSSDQACINQRCQDPCPGTCGARARCQVANHNPICSCPPNYVGDPFIVCRPEGKRLPEPSELLSSSMHFQSAGN
QRPLQLHAYHRRVGRTRTANHSTIAQCARVFRGCSALRPIAVQNAPLTRTVHSPWPAPIRSARIHARVLAASTPNAAWST
IGPSAAASQGLRAIRSPAVIQLPVSFLGICRSRGRCYSIPPLVVIEEPRNPCNPSPCGSNAACKERAGVGSCTCLVGFFG
DPYNGCRPECVTSSECAHTKACLNMKCTDPCPGTCGVNAKCSVINHIPQCYCPSGFSGNALSICRENVPCKDPNQQAPTC
VFNSFSTVSVVFEEHKRNPCVPSPCGPYSVCQISNDRPVCSCAAGYYGAPPTCKPECIVNSECTQDKSCNNQKCVDPCPG
TCGINALCRVVNHSPICSCPTSFTGDPFVRCLPEEKRPVDVENPCLPSPCGTFSECRVVNGRARCSCLPNYYGQPPNCKP
ECVVNSECSPSRACVNQKCKDPCPGSCGANAQCSAVNHVPVCYCLAGFTGDPFSGCQQCKTSRQWMSRPERSRPTLATLR
LAAPTPIAKS
Swiss-ProtNeurogenic locus notch homolog protein 2
SUPERFAMILYSSF90148  DPY module superfamily     
Gene3DG3DSA:2.10.25.10     
PfamPF12661  hEGF; Human growth factor-like EGF     
SMARTSM00274     
ProSiteProfilesPS50026  EGF_3; EGF-like domain profile.     
ProSitePatternsPS01186  EGF_2; EGF-like domain signature 2.     

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