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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO008395
PositionSeq_1102915:582400..588730[GBrowse]
sequence mRNA:
>DPO008395-RA
ATGGGTTTTCTAGTTGTCCAACCAGTTCCCAGGCCGACGCCCTGCTTGCCATCTCCTTGCGGCGCCAACGCCCAATGCCG
TGAGCAAAATGGGGCTGGTGCGTGTATTTGCTTGCCGGAATTCATAGGGAATCCTTATGAAGGCTGCCGGCCGGAATGCA
GCATCAACTCCGATTGTCCCTCGAACAAAGCATGCGTCCGAAACAGATGCACTGATCCTTGCCCTGGAACGTGTGGGCAG
AACGCTGAATGCCAGGCCATCAATCATCTGCCCTCGTGCAGTTGCTTAGCGCAATACACTGGAGATCCCTATCGATACTG
CAGCTTGGTGCCTCCTGAGCGTAAGTTGGTAGGCTTTTGTCCCTTTGCTGTTTGCTTACCGGCTGTGAGGGAAGAGCAGC
CCCAGAATCCTTGCCAGCCCTCGCCCTGCGGACCAAACAGCCAATGCCGCGAAGTCAATGGCCAAGCTGTCTGCTCGTGC
CTCCCAGAGTTCGTAGGCAGTCCTCCCGGCTGTAGGCCTGAATGCGTGGTTAGTGGGGAATGTCCGCCAAGCAAGGCCTG
TGTGAACTTGAAATGCGCGGATCCTTGCCCTGGAACATGCGGCCTGAATGCCAACTGCCACGTGATCAACCACAGCCCCA
TATGCAGCTGCTTGTCCCAATATACCGGAGATCCGTTCACTAGATGCTATCCCATTCCAGCGCCGGTGCCGCAGGAGGAG
CCAATAGCTCAGAACCCGTGTGTGCCATCGCCCTGCGGACCCAACAGCGAGTGTCGCGATATAGGCGGAAACCCCTCCTG
TTCCTGCTTGCGTGCGTTTATCGGCAGCCCTCCGAACTGCCGACCGGAATGCTCGATTAATGCGGAATGCCCGCATAACT
TGGCCTGCATCCAACAGAAATGCCGCGATCCTTGCCCTGGATCATGCGGCAGGAACGCCCAATGCTCCGTTATCAACCAT
ACCCCGATCTGCAGCTGTCTGGATGGGTATATTGGTGATCCGTTCACTAGTTGCTCACCCAAACCGCCCTCGCTCCCGGT
GGTGGAAGCTGATCCTTGCAACCCCTCGCCCTGCGGGGCCAATGCCCAATGCAATAGCGGAGTCTGCACTTGCCTGCCTG
AATACCACGGTGACCCTTATAGAGGGTGCAGGCCGGAATGCGTCCTCAATGAGGACTGTGCTAGGAATAGGGCTTGTATC
AGGAACAAGTGCCTGGACCCTTGTCCGGGCACCTGCGGCCAGAACGCTGAGTGTGCAGTAATCAACCACATCCCGATATG
TTCCTGCCGGTCCGGATTTGTGGGCAACGCCTTCGTAGCCTGCTCCCCTATTCCAGTGGAAGCTCCGCAAAACCCGTGCC
AGCCTGCGCCCTGCGGTCCCAATAGTCAATGTCGCGAGCTCAACGGCCAGGCCGTGTGCTCCTGCGTGCCTGGATACATC
GGAACTCCGCCCAGCTGCCGGCCCGAGTGTGTCACCAGTCCGGAATGCCCCTTGAACAGAGCTTGCCTTAACCAAAAATG
CATCGACCCTTGTCCGGGGACGTGCGGACTGAACGCCCAATGTTCGGTGGTCAATCACAACCCCATTTGCAGCTGCTTGC
CTGGCCAGACTGGGGATCCCTTCACCAGATGTCTCCCCATAAGAGAAGAACCGCCCCTGGCGCCTACCAATCCATGCCAG
CCCAATCCGTGCGGTCCAAACGCCCAATGCAAAGACGTTGGGAACGCCCCCTCCTGCTCCTGCCTGCCGGAATTCATCGG
CACCCCACCTAATTGCCGGCCGGAGTGTGTCAGTAATAGCGAATGTGCCGCGCACCTGGCCTGTATCAGTCAAAAGTGCA
AAGATCCCTGTCCTGGGACATGCGGCCTGGATGCCGCTTGCCGAGTGGTCAGCCACACTCCCAACTGCATTTGCCAGCCA
GGATTTGCAGGCAATCCATTTGTCCAGTGCACCTTGAAGGTGGAAGTGCCTCAGCCTGAACGGCCCACGCCTTGTATACC
ATCGCCATGTGGCGCGAATGCCCTCTGCAGGGAGCAGAACGGAGCTGGCGCCTGCCAATGTCTGCAAGAGTACATTGGAA
ATCCTTATGAAGGCTGCCGTCCGCAATGTTCTCTCAACTCTGACTGTCCCTCCAATAAGGCTTGCCTAAGCAACAAGTGC
AAAGATCCCTGTCCGGGGGCTTGTGGGAGCAACGCCCAATGCCAACCGATCAACCATCTGCCCTCCTGCAGTTGCATCGT
CGGATACACCGGCGATCCATTCCGGCACTGTGCAGTTATTGTAGAAGAACCGATCGTCGCCGAGCCCGCCAAGCCATGTG
AGCCTTCGCCCTGCGGGCCCAACAGTCAATGCCGCGAACTCAACGCGCAGGCGGTGTGCTCTTGTCTTCCAGACTATCAG
GGCACGCCTCCAGGTTGCCGGCCTGAGTGCGTGGTTAGCTCAGAATGTGCGCTGGATAAAGCCTGCGTTACCCAGAAGTG
CGCTGATCCATGCGTGGGGGTTTGTGGGTTGAACGCCAAATGCCAAGCGATCAACCACAGCCCCATTTGCAGCTGCTCGA
GCGGCTTTACTGGGGATCCCTTCAGTCGCTGTTATGCAACTCCAGCTCCTCCAGTCGAAGATGTGGTTCGACCGATAGTG
GATCCTTGCGTGCCNTCGCCCTGCGGGCCCAACTCCCAGTGTCGCGCTATTGGAGGGTTCCCGTCCTGCAGCTGCCTAGT
TAGCTACATCGGTTCCCCTCCAAGCTGTCGGCCCGAATGCACCATTAACTCCGAATGTCCCACCGACCAGGCGTGCATGC
AGCAGAAGTGCCGCGACCCTTGCCCAGGGCTTTGTGGGCCTGGGGCCCAATGTAGCGTCTTCAACCACATCCCAGTTTGC
GTCTGCCTAGAAGGGTATACAGGCGATCCGTTTAGTTTCTGCCGCGTGAAAGTCCCAGAGCCAGTTGTGGAGCAGGACCC
GTGCAACCCATCCCCGTGTGGCGCGAATGCGCAATGCAACAAAGGCACTTGCACATGCGTGCCCGACTACCACGGCGACC
CTTACGTGGGATGCCGGCCAGAGTGCCTACTGAACACCGATTGTCCTAACAGCAAGGCTTGCCTCAGGCAGAAGTGCGTG
GACCCCTGTCCAGGCACATGCGGCCAGAACGCCGAGTGTTCAGTCATCAACCACATCCCTACATGCGCCTGCCTGAGCGG
CTATCAAGGCAACGCCTTCGTAGGCTGCCAGCAGGTTCCGGCAGATTTGCCCCAGAATCCCTGCAATCCTACGCCCTGCG
GGCCCAACAGTCAATGTAGGGAAATCAACGGCCAGGCAGTTTGCTCGTGTGTGCCAGGATTTAGCGGCAGCCCTCCGGCT
TGCCGGCCGGAGTGCGTGTCATCCAACGAATGCTCCTTGGACAAGGCTTGCCAGAACCAAAAGTGCATCGATCCTTGTCC
GGGAACATGCGGAATCAGCGCCCTCTGTCAAGTGGTCAACCACAATCCCATTTGCAGTTGCCCCATCAGGCACTCTGGGG
ACCCCTTCACTAGATGCGCGCCTATCGGTAAGGGAGTTGCCAGTTTTCTGGACTTGGCATCTAAGCAATCGGTGAAACTT
TCAGTGGAAGAGCCAGTAGTAGTGGACCCATGCAACCCGTCACCTTGCGGCCCCAATGCCCAGTGCAAAGATATTCGCGG
GTCGCCATCCTGCTCCTGCTTGCCGCAGTTTATCGGCCAGCCTCCCAATTGCCGACCCGAGTGTGTCAGCAACAGCGAGT
GCGCCAACCACTTGGCCTGCATCAGTCAAAAGTGCACAGATCCCTGCCCTGGAACGTGTGGGGAAAACGCCGACTGCAGA
GTGGTCAGTCACAGCCCCAACTGCATTTGCCTGCAGGGCTACGCTGGGAATCCTTTCGTGCGGTGCAACATTGTTGAAGG
TATGATCGAGCTGGTTAAAGTGGTCTCTAACTCCCATTTCAAACTGTGTGTTCTGCAATTTCCAGCCCCTAGGCCTTTGG
AACAGATAAACCCCTGCTACCCGTCGCCTTGCGGCGCTAACGCCGTCTGCAGGGAGCAAAACAACGCGGGCTCATGCAGT
TGCATCCAGGATTACCTGGGAAATCCCTATGAGGGCTGCAGGCCGGAGTGCACGCTCAACTCCGATTGTCCATCAAGTCG
GGCCTGCATCAGGAACAAGTGCGTTGATCCCTGCCCTGGCACGTGTGGGCAGAACGCCCAATGTCAAGTGATCAATCACT
TGCCCTCGTGCAGTTGCACTGTCGGCTACACTGGGGATCCGTTCCGATTTTGCACGGTTGTGCAGCAACAGCCAACACGT
AAGATTCTGTGGAAGAGCCGCCGCAAAGCCCTTGCCAGCCCTCGCCCTGTGGGCCCAACAGCCAGTGCAGGGAGGTCAAC
AGCCAGGCGGTTTGCTCTTGTTTGCCCACTTACGTGGGCTCGCCCCCAGGCTGTAGGCCCGAATGCACGGTTAGCGCGGA
GTGTCCGCAGGCTCAGGCCTGCATTAACCAAAAATGCGCCGATCCCTGCCCAGGCACCTGCGGGCTTAGCGCCCAATGCA
GCGTTATCAACCACAGCCCCATCTGCAGTTGCCTGCCTGCGTTCACTGGGGATCCGTTCACTCGCTGCTATGCCAATCCA
CGTAAGGCTTAAACCGTTTGCCCACTCTGCGCCGCCAGAGCCGACTCAGCCAGTGCTGAGCAACCCTTGTGTGCCATCGC
CTTGCGGTCCCTACTCGATCTGTCAGGATATGAGCGGCGCCCCGTCCTGCTCCTGCGTGTCCTCGTACATTGGCAGCCCG
CCCAATTGCCGGCCGGAATGCACCATTAACTCAGACTGCGTCAGCAGGCTGGCGTGCATCCGCGAGAAATGCACGGATCC
ATGCCCGGGCTCTTGTGGGCTCAACGCGCAGTGCTCCGTAATCAATCACCTGCCAATCTGCTCCTGCCTGGACGGATACA
CAGGAGATCCGTTCAACCGTTGTCATCCCAAGCCGGCGCCGCCCGCCCCAACAGTTGAGGCCGATCCATGCAACCCCTCG
CCTTGCGGGCCGAACGCCATATGCAACAGCGGCAGCTGCAGCTGCGTTCCAGAGTACCACGGCGATCCCTATATGGGATG
TCGGCCCGAGTGCCTCCTTAGCACCGACTGTGCCAGAGATAAGGCGTGCATGAACCAAAAGTGTCGCGACCCTTGCCCGG
GCACCTGCGGCCAAAACGCTGAATGCGCCGTCATAAACCACATACCAAGCTGCACCTGCCTGCAAGGCTATGCAGGTGAA
CCATTTGTGATTTGCCACAAAACTCCTGCGGATGTTCCGCAAAACCCCTGCAACCCGTCGCCATGTGGGCCCAACAGCCA
ATGCCGCCCCATCAATGGTCAAGCGGTCTGTTCTTGCGTGCTGGGCTACATTGGAAGCCCTCCAACCTGCCGCCCCGAGT
GCATCACCTCGAGTGAGTGCCCCCTTAATCAAGCCTGNTGCCCGGGCACTTGCGGCATAAATGCGCTGTGTCAAGTCATC
AATCACAACCCCGTATGCAGTTGCCGTCAAAGACAGACCGGCGATCCGTTTGTCCGGTGTGTGCCTATCAGTGAGTTGCC
CTGTGCCTCAGTGACATGCTCACGCACTAACCTGGGTATTTCAGGAGAAGAGCCCCCAGTGGAACCCACCAACCCTTGCC
AACCATCCCCTTGCGGCCCCAACTCTCAATGCAGGGACCTGAATGGTAGTCCCTCATGCTCGTGCCTCCCTGAGTTTATC
GGCTCGCCTCCAAGTTGCCGGCCGGAGTGTGTGAGCAACAGCGAATGCCGCTCTCACCTGGCGTGCATCAACCAAAAGTG
CAAAGACCCCTGTGAGGGAGTATGCGGCCAAAACGCCGAGTGTCGAGTAGTGAGCCACACTCCCAACTGCGTCTGCTTGC
CGGGCCACAACGGAAACCCCTTCCTGAGATGCGCCACTATTGAGGGTAACGTTCAGGTGATTTGTGCCACAACCCTCTTA
ACCGCTGAACCTTTGTAG
PEP:
>DPO008395-PA
MGFLVVQPVPRPTPCLPSPCGANAQCREQNGAGACICLPEFIGNPYEGCRPECSINSDCPSNKACVRNRCTDPCPGTCGQ
NAECQAINHLPSCSCLAQYTGDPYRYCSLVPPERKLVGFCPFAVCLPAVREEQPQNPCQPSPCGPNSQCREVNGQAVCSC
LPEFVGSPPGCRPECVVSGECPPSKACVNLKCADPCPGTCGLNANCHVINHSPICSCLSQYTGDPFTRCYPIPAPVPQEE
PIAQNPCVPSPCGPNSECRDIGGNPSCSCLRAFIGSPPNCRPECSINAECPHNLACIQQKCRDPCPGSCGRNAQCSVINH
TPICSCLDGYIGDPFTSCSPKPPSLPVVEADPCNPSPCGANAQCNSGVCTCLPEYHGDPYRGCRPECVLNEDCARNRACI
RNKCLDPCPGTCGQNAECAVINHIPICSCRSGFVGNAFVACSPIPVEAPQNPCQPAPCGPNSQCRELNGQAVCSCVPGYI
GTPPSCRPECVTSPECPLNRACLNQKCIDPCPGTCGLNAQCSVVNHNPICSCLPGQTGDPFTRCLPIREEPPLAPTNPCQ
PNPCGPNAQCKDVGNAPSCSCLPEFIGTPPNCRPECVSNSECAAHLACISQKCKDPCPGTCGLDAACRVVSHTPNCICQP
GFAGNPFVQCTLKVEVPQPERPTPCIPSPCGANALCREQNGAGACQCLQEYIGNPYEGCRPQCSLNSDCPSNKACLSNKC
KDPCPGACGSNAQCQPINHLPSCSCIVGYTGDPFRHCAVIVEEPIVAEPAKPCEPSPCGPNSQCRELNAQAVCSCLPDYQ
GTPPGCRPECVVSSECALDKACVTQKCADPCVGVCGLNAKCQAINHSPICSCSSGFTGDPFSRCYATPAPPVEDVVRPIV
DPCVPSPCGPNSQCRAIGGFPSCSCLVSYIGSPPSCRPECTINSECPTDQACMQQKCRDPCPGLCGPGAQCSVFNHIPVC
VCLEGYTGDPFSFCRVKVPEPVVEQDPCNPSPCGANAQCNKGTCTCVPDYHGDPYVGCRPECLLNTDCPNSKACLRQKCV
DPCPGTCGQNAECSVINHIPTCACLSGYQGNAFVGCQQVPADLPQNPCNPTPCGPNSQCREINGQAVCSCVPGFSGSPPA
CRPECVSSNECSLDKACQNQKCIDPCPGTCGISALCQVVNHNPICSCPIRHSGDPFTRCAPIGKGVASFLDLASKQSVKL
SVEEPVVVDPCNPSPCGPNAQCKDIRGSPSCSCLPQFIGQPPNCRPECVSNSECANHLACISQKCTDPCPGTCGENADCR
VVSHSPNCICLQGYAGNPFVRCNIVEGMIELVKVVSNSHFKLCVLQFPAPRPLEQINPCYPSPCGANAVCREQNNAGSCS
CIQDYLGNPYEGCRPECTLNSDCPSSRACIRNKCVDPCPGTCGQNAQCQVINHLPSCSCTVGYTGDPFRFCTVVQQQPTR
KILWKSRRKALASPRPVGPTASAGRSTARRFALVCPLTWARPQAVGPNARLARSVRRLRPALTKNAPIPAQAPAGLAPNA
ALSTTAPSAVACLRSLGIRSLAAMPIHVRLKPFAHSAPPEPTQPVLSNPCVPSPCGPYSICQDMSGAPSCSCVSSYIGSP
PNCRPECTINSDCVSRLACIREKCTDPCPGSCGLNAQCSVINHLPICSCLDGYTGDPFNRCHPKPAPPAPTVEADPCNPS
PCGPNAICNSGSCSCVPEYHGDPYMGCRPECLLSTDCARDKACMNQKCRDPCPGTCGQNAECAVINHIPSCTCLQGYAGE
PFVICHKTPADVPQNPCNPSPCGPNSQCRPINGQAVCSCVLGYIGSPPTCRPECITSSECPLNQAXCPGTCGINALCQVI
NHNPVCSCRQRQTGDPFVRCVPISELPCASVTCSRTNLGISGEEPPVEPTNPCQPSPCGPNSQCRDLNGSPSCSCLPEFI
GSPPSCRPECVSNSECRSHLACINQKCKDPCEGVCGQNAECRVVSHTPNCVCLPGHNGNPFLRCATIEGNVQVICATTLL
TAEPL
Swiss-ProtNeurogenic locus notch homolog protein 1
SUPERFAMILYSSF57184  Growth factor receptor domain superfamily     
Gene3DG3DSA:2.10.25.10     
SMARTSM00274     
ProSiteProfilesPS50026  EGF_3; EGF-like domain profile.     
ProSitePatternsPS01186  EGF_2; EGF-like domain signature 2.     

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