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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO007569
PositionSeq_1102691:296062..304762[GBrowse]
sequence mRNA:
>DPO007569-RA
CTCTAGGCAAAGCTTTGTAGTTGGTTCACATTTGCGGTAGTCAGCTAATGGGGGTCATTTGATAAAACCGCGAGGGGTTA
GAGGAAAATAAACATCAGCTAAATAAGTAGATCAGTCGCGATTGAATTAGTTTACTCAAGCAATAACTAAACGACGGTTG
TTTTAAAAAGTCCGACTTTACACGCAGCAATGTGGCTGCAGGGGCTTGTTTGCGCCGCAGCATTTTTCACTGCCTCTGCA
ATTGATCTGCCCGTTTGGAGCGACGTTTATTCAGTAAAAGGTGTCATATTTATTCCCTACGCTGAACTCGCTGAGCCGTT
CTCCACCTGGTACGATGGTCCAAATAAACAATCACGAATCGATTATTATGGGGACATGGTCAAGACGTACCAATTGGGCA
AGGATGGGTCGGGAACCAGCTTGAAAATTGCTCCGGTTACAACCGAAGAAGAAGTGAATATTAGAACTTGCTTGCAAGTG
AATGGAAGCCAAGAACAACCCATTCGTCCCCAAACTGTCCTCCCTGAGCTTAAAGGATTTGAATATCTTGGCAAGTTACT
AAGTGATGAAGTGATCGAAGGCATTCAAACACAAAAATGGAACCTGACCACCACAGTCGGTGAGAAGGAAAACAAGTACT
TCCTTTGGGTGACTTTCAAAGAAGATGGCGACCAAAAAATCGCAGTTCCCGTGAGATACGAAATGAGGGGCTTCAACTCC
CTGCTGGGCAGCCATTACGACCACTACTTCTTGCGATATGACGAGTTCGACATAAGCCCGATTGATTCGGAAATATTCAG
CATCGATACCAGCTTGAAATGCCAAGGATTTCCTGGACCGGGCGATAAGCACATTTACACTTTCAACCCGATGGCGGAAT
TCATCAAGCCCGAAACCACTGGGCATCTTGAGTTCGAATTCAACAAGTTCACGAAGAAGCACCGAAGGATTTACACCAAC
CAAAATGAGCGGCTGCTTCGCATGGAGATTTTCCGACAAAACGTACGCTTTATCCATTCCCACAACAGGAAGAATGTTGG
ATTCTCTTTGAGCGTTAACCATCTGGCCGACAAAACTGAAACGGAACTTAAAGCCCTGCGAGGCAAAACCTATTCCAAAG
AGTACAATGAAGGTCTACCCTTCCCCTATACCAGCGAGGACTTTTCCAACCTGCCCGATCAATGGGACTGGAGGCTATAT
GGGGCTGTTACCCCCGTGAAAGACCAATCGGTATGTGGTTCCTGCTGGTCATTTGGCACCATCGGCACCGTAGAAGGTGC
ATTCTTTTTGAAAAACGGAGGCCATCTAGTGCGACTATCGCAGCAGGCTTTAATCGACTGCTCTTGGGGCTTTGGAAATA
ATGGATGCGATGGAGGAGAAGACTTCAGGGCCTACCAATGGATTAAAAAGCATGGTGGCATTCCAACTGAAGAGGATTAT
GGGCCGTATTTAGGACAGGATGGATATTGCCATGCCGATAAACTGCCCAAAGTAGCCAAGCTGTCCAGTTGGACGAATGT
GACCACTAACGATGAGAACGCGCTCCGACTGGCCATCTTCAAACACGGGCCTATTAGTGTGGCAATTGATGCCAGCCAGA
GAACGTTCAGCTTCTATTCGAACGGCGTCTACTTCGAGGAGAAATGTCACAACAAAGTGGATGAGCTGGATCATGCAGTG
CTGGCCGTGGGCTATGGAAGCATTAATGGAAACCACTACTGGCTGGTGAAGAACAGCTGGTCCAACTACTGGGGTAACGA
TGGATACGTTCTAATAGCCGTGAAAATAGGCGCAGCAGCCGAAAAGCCCCCCCAAACCAAGTTCCACGAAGGTAGCATGG
CGGATGGGCATAGTAGTGAGGATTCTGATGCGGAAAATCAAACGGAATTCGCAGGCATTTTAAGCAAATGGACCAACTAC
ATCCACGGCTGGCAGGATCGTTATATTGTGTTGAAAAGTGGCACTTTATCCTACTATAGAAGCGAGCACGAACGAGGTTA
TGGCTGCAGGGGAGCGCTGTCGCTCACCAAGGCTCCTCACGAGTTCGACGAGTGTCGATTTGATGTGGCTGTGAACGACT
GCGTTTGGTATCTGCGGGCTGATTCTGTTGAAATTAAGCAGGGCTGGCTGGAGGCTTTGGAATCTTGCAGGGTTGAATCT
GGATATGCGACCGGATCAGAAACCAGCCTGAAAAGACACGATTCGTCAGTGAGCTTGCAGTCGAACAACCACAGCACCGC
GTCTGGAAGCAGTTTCAAGAAAGGCTCGAGAACTTTGAGGGAAAAACTCGCCGAAATTGATACCTACAGAGACATTCTTA
GCCAGCAGATCGACACATTGCAGAAGTACTTTGATTCGTGCGTCGAGCTGGACTTGGGAAAGGAATCTCAAAGTAAAGAG
AGCCCGCCGGCGGTTGACTTCAAAGGAGAGTCGATCACATTCAAAACAACCACTGCGGCAGTAATCGATACTTTATCGCA
TTGTTCTGAGCTGGTGGTGCAACGAGAAGAGTCCTGGAGAAAGCGGCTCGACAGAGAGAAGGAGCGCAGGAAGCACTGCG
AAGTGCTGGCTCAGAAGTACTTCGAGCAGCTGCAGAAGTCCAGAACGGTGCATCCCGGCCCGGATCTAGAGGAAGGACCT
CATAGTGTCCTCGCGGACGATGAGTTCTACGACGCAGTGGAATCGGGCCTAGACAAAATGGAAGAAGAACAAGAATTGCG
AGAAAAATTGAAAACCGGTCAAATCCCAATCACACCACCCCCAACATCTCCAGCTATTCAGCACAGATTGTGGCCGGAGG
TGGATCGCTTGGTGAAGCAACAAGTGGCCATGGCTAGAATGGGCATCGGCGAATGCGGCACCGGCTGGCAACTGTTTGCA
GAAGACGGCGAAATGAAAATGTACCGGCGGGAGGAAGAAGTCGATGGCATGGTGGTGGATCCGTTGAAAGCCGTACATGT
GGTCAAGGGCATTACGGGGCACGAAGTGTGCGATTATTTTTTTAACCCCAAGTATCGCTACGACTGGGAAACGACCCTGG
AACACATGACCGTACTGGAAACAATATCCGACGATACGCTCGTTTTCCTGCAGACCCACAAGAGAATCTGGCCAGCCAGT
CAAAGAGACGTGGTTTTTTGGTCGCACATGAGGAAATTGCCCAACGATCAGGACCGCGACGGTCCTGATATATGGACTGT
TGTGAACAATTCCACAGAAAGCCCTGAACACCCGGCCAATGTGGGAAAGTGCGTCCGGATATACTTAACGGTATGTCTTC
TGTGTCAGACCAGAGTGCATCCGCCCAAGGATGGGGCCCCGATTACCCGAAACAATGTGTCCTGTAAAATCACCTATTGT
TCAGTGGGTAATGAACCCGGGCGGTTGGGCACCAGCATCAGTGCTGAGGGCGGTGTACAAGCGAGAGTACCCAAAATTCT
TAAAGCGCTTCACCTCATACGTGATCAATCAAACAAAGAACAAACCGCTGATGTTTTAACTCCTAAGAGCTGAACCATAT
TTTGTTTTATCTTTATTATTTATACATTTACTATTAAATGTTATTTTATGTTA
PEP:
>DPO007569-PA
MWLQGLVCAAAFFTASAIDLPVWSDVYSVKGVIFIPYAELAEPFSTWYDGPNKQSRIDYYGDMVKTYQLGKDGSGTSLKI
APVTTEEEVNIRTCLQVNGSQEQPIRPQTVLPELKGFEYLGKLLSDEVIEGIQTQKWNLTTTVGEKENKYFLWVTFKEDG
DQKIAVPVRYEMRGFNSLLGSHYDHYFLRYDEFDISPIDSEIFSIDTSLKCQGFPGPGDKHIYTFNPMAEFIKPETTGHL
EFEFNKFTKKHRRIYTNQNERLLRMEIFRQNVRFIHSHNRKNVGFSLSVNHLADKTETELKALRGKTYSKEYNEGLPFPY
TSEDFSNLPDQWDWRLYGAVTPVKDQSVCGSCWSFGTIGTVEGAFFLKNGGHLVRLSQQALIDCSWGFGNNGCDGGEDFR
AYQWIKKHGGIPTEEDYGPYLGQDGYCHADKLPKVAKLSSWTNVTTNDENALRLAIFKHGPISVAIDASQRTFSFYSNGV
YFEEKCHNKVDELDHAVLAVGYGSINGNHYWLVKNSWSNYWGNDGYVLIAVKIGAAAEKPPQTKFHEGSMADGHSSEDSD
AENQTEFAGILSKWTNYIHGWQDRYIVLKSGTLSYYRSEHERGYGCRGALSLTKAPHEFDECRFDVAVNDCVWYLRADSV
EIKQGWLEALESCRVESGYATGSETSLKRHDSSVSLQSNNHSTASGSSFKKGSRTLREKLAEIDTYRDILSQQIDTLQKY
FDSCVELDLGKESQSKESPPAVDFKGESITFKTTTAAVIDTLSHCSELVVQREESWRKRLDREKERRKHCEVLAQKYFEQ
LQKSRTVHPGPDLEEGPHSVLADDEFYDAVESGLDKMEEEQELREKLKTGQIPITPPPTSPAIQHRLWPEVDRLVKQQVA
MARMGIGECGTGWQLFAEDGEMKMYRREEEVDGMVVDPLKAVHVVKGITGHEVCDYFFNPKYRYDWETTLEHMTVLETIS
DDTLVFLQTHKRIWPASQRDVVFWSHMRKLPNDQDRDGPDIWTVVNNSTESPEHPANVGKCVRIYLTVCLLCQTRVHPPK
DGAPITRNNVSCKITYCSVGNEPGRLGTSISAEGGVQARVPKILKALHLIRDQSNKEQTADVLTPKS
Swiss-ProtCollagen type IV alpha-3-binding protein
SUPERFAMILYSSF55961  Bet v1-like superfamily     
Gene3DG3DSA:2.30.29.30     
PfamPF00169  PH; PH domain     
SMARTSM00233     
ProSiteProfilesPS50848  START; START domain profile.     
PRINTSPR00705     
ProSitePatternsPS00139  THIOL_PROTEASE_CYS; Eukaryotic thiol (cysteine) proteases cysteine active site.     

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