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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO007250
PositionSeq_1103038:459160..472531[GBrowse]
sequence mRNA: 
>DPO007250-RA
ATGATTGGCTTGAAGATTGTGGACGACTACCTGAACAAGGCCTTTTACAAGTTGGGGTTCGTGGTAGGAAAACATCCTGG
TTACTTCATCATCGTTCCGATTCTACTGACATGTTTGGGCATGACCGGCTACCAGAAAATGCACAATAACATCGATCCCG
AGTACTTATTCAGTCCATTGAATGGCGAAGGCAAACAAGAAAGGTCCATCGTTGAACAGTACTTTAAAGTGAATTATACT
AGTCGATTCAATGTGGCCAGGATAACACGAGCAGGGCGATTTGGCCGAGTGATAATCACGTCGAAGGACGGCATCAAAAA
CATGCTTCGAACGGACGTTTGGAAGGAGATGCGACAACTGGATGATCTCATCCAGAACATGACTGTCCATTTCCAAGACG
AGCAATTCAATTATTCAAATATCTGCGCCAAATGGATGGATGAGTGCTTTCAGAACGACATTTTAAATCTGGAGTATATT
ATGGATGAAGTGGAAGCTGGAGAGCGAAACTTAACATTTCCTCTGACGCTCAACACGGTAACATTCGACGTTCACGCTCT
TCCAGTGTTCTTTGGCGGCACCGAAGTGAGTGAGGACGGATTAGTTATAAGCGTCCCATCCGTCCAGCTTGTGTACTTTG
GAAATGCCGACAACAAGAAAATCGACGCCTTAAAGGAAACTTGTATTGCGGCTAATATTTCAGCAAGTGGTTTTCAATTT
TTTTATCAATTTGCCAGAGGTGGCGCTTGGGAGGAAGGCTTTCTGAATCTAATCGAACAAGTCCAGGACATCGAGAACCG
TTTCAAACACATCCGAATAGCGCGATTTGCGTCGAAGACTTTGGATCACGAACTGGAAAAAAACGCCCGTTCGGTGATTC
CTTATTTCACCTCGACGTTTGTGATCATGGCAATTTTTTCAGTCGTGACCTGCATGATGACGGACTGGGTGAGGTCGAAA
CCCTGGCTAGGACTGCTGGGAAATATTAGTGCGGCAATGGCAACTTTGTGTGCATTCGGAATCTGCATGTATGCAGATGT
GGATTTTATTGGGATTAACTTGGCGGCCCCTTTTTTGATGATTGGCGTAGGAATTGACGATACATTCGTCATGCTGGCGG
CTTGGAGAAGAACGTCCATAAAAACGCCCGTTCCACAAAGAATGGCCGAAATGTTGGGCGAAGCTGCTGTTTCCATCACC
ATCACTTCCGTCACCGACTTTTTCAGCTTCGGTATTGGGATTTTCAGCCCGTTCCCATCGGTCACCATTTTCTGCATTTA
TTCTGAGGACAGATGTTGGTTATACAAAGTGTTCTGCAGTGGAGGAGTCAATCCGAATGACATGGATAATCCAAAAGACA
ACACCGAGCACGGATTGATGGTCTTCTTTCGGGATTATTTTGCGGTGTTCTTAAGCAATGGCTTCGTGAAAGTCTTGGTT
ATTCTGATATTCGGCTGTTACCTGGCTGGGGCCGGCTATGGAGTCACGCAAATCGAAGAGGGACTAGAAAGACGAAAAGT
CGCCAAAAATGGCTCGTATGCTATCGAGTTTTTCGATCGAGAGGACGATTATTATAGGGAATTTCCTTATAGAGTGCAGG
TGATAGTGGCGGGCGAATACGACTATTCCGACCCGAAAATTCAAGCACAAATCGAAAATTTAACGCGCACATTTGAAAAC
ACTTCGTACATAACGAACAGCCTCTACACAGAGTCCTGGCTGCGAAGCTTCCTGCAATACGTCGACAGGAACGCTGATTA
TCTGAACATCTCCATTAATTCCCGAAAGAACTTCATGGAAGCTTTGGAAGAGCGCAAATGGTTGGATCCGTCCAGTGCCT
TTTCGCTGGACGTGAAGTTTGATGAGAAAAACGAGAAAATTATCGCGATGAGGTTCCTGATCCAAGCAGTGAATATTTCG
GGCACCGAGCACGAGAAGGAGATGGTGCGGGCCTTGAGGAAAATCTGCAAAGATTCACCATTGAATGTCACAGTTTTCCA
TCCTTACTTCGTCTTCTTCGACCAGTTCGAGCTAGTGCGGCCTTTAACCATACAAAACGTTCTAATCGGGGGCGGCATCA
TGATGATAGTTTCCTTCATTTTCATCCCCAATGTCTTTTGCGCCGTTTGGGTGGCCTTCAGCATCATCTCCATCGAACTG
GGCGTGATCGGCTACATGGCCTTATGGAAAGTCAACTTGGATTCCATTTCCATGATCAACATCATCATGTGCATTGGATT
TAGCGTAGACTTCACTGCTCACATTTGCTACTCCTACATGTCCTCCACAGAAAAGACTCCCAATGAGAAGATGAGGATGG
CTCTATATTCGCTGGGATTGCCAATATTTCAAGGATCAGTAAGCACCATTCTAGGAGTGCTCGCGCTCATCTTAGCCAAC
AACTACATCTTCGCCGTTTTCTTCAAAATGATCTTCTTGGTGGTGTTCCTTGGCGCCATGCATGGGCTCTTCCTGTTACC
GGTTCTACTGTCCCTCTTCGGGCCGGGCTCCTGCAGCAGCCCGGCGCAGGACGACGACGTAAAAATGTCAAGCATCGAAA
AATCTCTGCCTCATCCCTACTGTATCCCTCATCCGCGCTTCACGCTCAACGGAAGCAACCTGAAACCCTCCGACTTGATG
CCGGTTGATTACCTGAAAAAGCCGATCAAAGGTTTCGGGGAGATGGAGAAGGACTTGGGGCTGGGAACTTCCGAGGAGAA
TTCCAGCCAGTCTTCTACGCATTCCAACAAGAAGCCCCGGGGGGAAATGCCTCCGAAGGACGTGGGGAGGCAGTACGGAG
AGTCATGGAGAAGGGGCTCAGATTTCCACTTGAATCAGTACAGACCGCGCCATATCGACATATATGGTACCGAGCTGTAC
CGGCCGAGGGACGAAGAAGTCTTGGAGAGGTATAATGGGGGGTATAACACGGAGGATCGGAGACAGCAGCACCAAAGATG
GAGGTATTCTCCTACTGAGCACGGAAATTTCCTTCCCAATGCGGCCCTAGTTAGGTCCAGCTCCTACCACAATGTTTTGC
ATCCGAGATTTTTAAAGGAATCTCGCTTTCCCTAA
PEP: 
>DPO007250-PA
MIGLKIVDDYLNKAFYKLGFVVGKHPGYFIIVPILLTCLGMTGYQKMHNNIDPEYLFSPLNGEGKQERSIVEQYFKVNYT
SRFNVARITRAGRFGRVIITSKDGIKNMLRTDVWKEMRQLDDLIQNMTVHFQDEQFNYSNICAKWMDECFQNDILNLEYI
MDEVEAGERNLTFPLTLNTVTFDVHALPVFFGGTEVSEDGLVISVPSVQLVYFGNADNKKIDALKETCIAANISASGFQF
FYQFARGGAWEEGFLNLIEQVQDIENRFKHIRIARFASKTLDHELEKNARSVIPYFTSTFVIMAIFSVVTCMMTDWVRSK
PWLGLLGNISAAMATLCAFGICMYADVDFIGINLAAPFLMIGVGIDDTFVMLAAWRRTSIKTPVPQRMAEMLGEAAVSIT
ITSVTDFFSFGIGIFSPFPSVTIFCIYSEDRCWLYKVFCSGGVNPNDMDNPKDNTEHGLMVFFRDYFAVFLSNGFVKVLV
ILIFGCYLAGAGYGVTQIEEGLERRKVAKNGSYAIEFFDREDDYYREFPYRVQVIVAGEYDYSDPKIQAQIENLTRTFEN
TSYITNSLYTESWLRSFLQYVDRNADYLNISINSRKNFMEALEERKWLDPSSAFSLDVKFDEKNEKIIAMRFLIQAVNIS
GTEHEKEMVRALRKICKDSPLNVTVFHPYFVFFDQFELVRPLTIQNVLIGGGIMMIVSFIFIPNVFCAVWVAFSIISIEL
GVIGYMALWKVNLDSISMINIIMCIGFSVDFTAHICYSYMSSTEKTPNEKMRMALYSLGLPIFQGSVSTILGVLALILAN
NYIFAVFFKMIFLVVFLGAMHGLFLLPVLLSLFGPGSCSSPAQDDDVKMSSIEKSLPHPYCIPHPRFTLNGSNLKPSDLM
PVDYLKKPIKGFGEMEKDLGLGTSEENSSQSSTHSNKKPRGEMPPKDVGRQYGESWRRGSDFHLNQYRPRHIDIYGTELY
RPRDEEVLERYNGGYNTEDRRQQHQRWRYSPTEHGNFLPNAALVRSSSYHNVLHPRFLKESRFP
Swiss-ProtPatched domain-containing protein 3
SUPERFAMILYSSF82866  Multidrug efflux transporter AcrB transmembrane domain superfamily     
Gene3DG3DSA:1.20.1640.10     
PfamPF02460  Patched; Patched family     
ProSiteProfilesPS50156  SSD; Sterol-sensing domain (SSD) profile.     

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