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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO007187
PositionSeq_1102565:72650..77691[GBrowse]
sequence mRNA:
>DPO007187-RA
ATGGTCCTCGATGTGGTGGCAGGCGTGAAAGGAGTCGCACTCCATTTGAGTGTGCTCTTTTTCGAGGCATCCTGTGGTTC
TGTTACTCAAATGTGTCGAGTACTGATGAACTGTCCGGAAATCGTTTCAATTGGATTGGTGTGGAATTCAGATAAGCCTA
GTTTAGACCATATTATGGAAGTTTTCTCCTGTGTGAATACTACGCTTCAACTGAAAGACGTTTTCAGTACAGTGACCGAT
TCTCGATGGGCAGAAACCACTACTCATAATTTAGTTGGCATGGTCACTTATTACGGAAAACATTATTCCACCTTTTTCTT
CCACACCAAGTTAATGGAATGGATTTTCTTGGACGACGCTACACTAAGAGACGTTGGACCGCGATGGGAGCAAGTAGTAG
AAAAATGCAGAAGGAGAAAGTTCCAACCTTTACTACTACTTTATGCGACTCCTGATGGGACCCCTGTGAACCCGGAGTAC
GCGCCTAAATCGAATACTCCATTTTACACAGACAAGAACAAGCCTCCATTACCAATGGGAAAACAACTTTTACGAAGGTC
TATTACACCCAGCCCTGAGAAACCAATTGTGGGAAACACTCGGCGCGCTATAACACCCAATCCCGAGAGCTGTACACTCA
GTCAAAAACCTCAATTTCCGAAGTCGTACAACGAATACCAAAATCTTTCGGTTATTCAAAAGAATATTAACATACCAAAA
GACTCGATAGGATTTGATCAAGTTGATGAATGTGCGCAAAAATCACTAGAATATATTACCAGAAAATCTACCGATAGTGA
GAACCCTACAGTGAATATACCCAGAACATTAAGTAATGGTTCTTCATCTGGAGTTGAATCGGGCGTTTGCATTCTTGACC
ATCTAAACATACCTCGAAGAAGGGACAGTGGTAACTGGAGTAGGGACCGGAACAGTGCTTCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGTAGGGAAAGTGCCACCAGGAGGTCCGAATCGAACAAAAGGTGATGGAAATGGAGC
CTACGATGCTGGATACGATTCGTACTCATTATCATCAAATGACAGCACTAATATGAGCACAGTGCAACATATGATGAAGA
GTGGCCATCTGGCTCAAATTCCTGAAGATTATAGCAACATGGTTCAAAACCCAAACGCACTGAGCTGTGATGTATTATGT
GATGAAGCTGATGAGCTTCTTATTAAGTCTCGACAATTGGAGGACGCTCATGATCTCGTTTTGGCTTTGGCGTTGTGCAA
TGCCGCGGCAACCAAAGCTAGAGCTGCTATGAATGCTCCATATAATAATCCACAAACTTTGACTCTAGCACGGATGAAAC
ACAATACTTGTATAATGCGCGCTAGAAGTCTACATAGGCGAATGACGCAAATGCAACCACAGAATAAAGAAAATTCTTTA
GAGATCCGACACACGCGGGAAGGCAGTAGTGGAAGCGGGCGGCATTCGAGACAAAACTCTAAAGATAAAGGACATCACTC
GAGGCAAAGTAGCAGAGAATTGCTTCTCCAACAAGACAAAGAAAAGTCGAAACCAATTAAGAGCATCGAAATATACGCAA
CACTGCCTAAAAAAAAGGATGTGCTGAAAGCAAAACTAAATGACATTAACATAGATAACGAGGAAAATATGATATATGTT
AAGGCCCCTGAGCGGGAATCTCGGTCAATATTTTCGAGATCCAAAAATAAAGACAATAAATCTAAAGAAAAGCGATCGCC
GAGTGAAGACAGAAACAAAATCAATAGAGGGGACTTTTCAATTGCGCCAGATCTAAGAGCTGCCCAAGATACTCTGAAGA
AAGCGAAGGAAATCAAAGAGGAAAAAAAAGATAAAGAAGGAAAAACTAAGAAGCAACACAAAATAAGAAGGAAGCTTTTA
ATGGGTGGATTAATACGAAGAAAAAACAAAAGTCTGCCTGATTTAACCGATTCTAACGCTGAAGATCAATGTCAATGTCC
TCGATCTGCCGATGACACGACCGTTGGTCTTAGAGCCAGTCCAAAAACACTAAATCAAGGCATGACGGGATATGTTTCCG
AAGGCCATCTAGAAGTCAGTGGTGCCACATCCAATCCCAATCTTGAGCGAAGTAAATTGATGAGAAAAAGCTTCCATGGC
AGTGCCGGCAAAATTCTTACCGTAGCCAAAGTGCCCCCACCTCCACCTTTACGGACTACTTCTCAACTTAGCCGGTCTAA
GTCGAATATATCAGAAGTGGCCGATAAATGTCAGTTTAACATTTACGGGGATGTTAATATTTACCATAATTTAGCTCCTT
TTAACCAACCTCAGGAGGAACAATCATCCATGTCGCTGCCATACTACGGACATTCAAACAGTTCCTATGATGATGATTCA
TATTCGCCTTCATCGCATATTGTTATTACCCAGGCAGAAGTGCATCATGAACATAGTGCGCAATCGGCCAACGCTGATGT
CAGCAGTGGAGTGGACGAAGTGGACTGTTGCCCCTCTCAATGGGCACCATTAATGGACCTACCTCCTTATCCTAGTCCAA
GTGGATCGGCTATTCATTCCCGACAGGCTAGTGAGGATTTTCCACCTCCACCTCCACCGTTGGACTTATCAGTTTTAGAT
GAACACCTCCCACAAGTTCAATTAAAAGAACAATGTTCTCTAAAAGAGGAACCGGAAACCTTGCTAGGTCAACTGCAGAA
TAAAAGATTGCAAATTCTCACCCATGAGAATGATAATAGAGTGCTAAAGCAGCCAAACATTTATCCTCAAAATAGCGTTC
GATCCACCGGAGATACTTGGCTGAAGGAACTTCAGGCTAAGCAAGCTGTTTTGAGAACAAAACTTAATGAAAATGTAAGC
AATTCTGATGGAGGGAGAGACGAAGTCAATACTCAGCGATTTGCAACAGGTGAAAATAAAGTAAAATCTGTTAAAGACTT
GGCTTCTAAATTTGAACATGTACTAGATGTTAGTAATGGGCAGTTAAGACACCAGGCAACTTTGCCAAAAGCAGTCAATA
CGAACAGTCAACCTATGTTTAAGAACAATGAGTACCATACTATTGCACCGGAACAAATTGCTGAAGAAATTCGAGAAGTT
GAAATGATCACATCTGCTGTTAATAAAGTATTTGGAAACGACCAGCCAGAAAATTCAGATGAAAGTAAAAAACTAAGACA
CCAAAAAAAGAAATCCGTTTCATTTTGCGACCAGGTTATACTGGTAGCCACAGCAGAGGATCAAGAAGAAGAAACTTATA
TTCCAAATCCTATTTTAGAAAGGGTGCTAAGATCTGCGGTTAATAATCCTGAAACTACTGCTATACGACAAGAACTAATG
GCATTGAGAGATAAAAATGGCATTAATCAATCTCCTTCTATTGTTCCACAATCATCTAAATTAGCGAGTTCAAAACCAAC
AACCCTCACCCCGGAAATAATAGCAATGAATGAAGGACAAACATTGCCATTACGAAGGAACTCACTAGAAAACTTGTTAC
AAGAGACCAGTACACGACTTCCGCATCAGATGCTTTATAACGGGGAAATACCAATTGAGCAACGTTTTCTGTCTTTACCT
CAATCACATCAGCCATATCAGCAAAACGTAAATTTACCACAACTGAACTCGGACGAACACTATTATCCATATAACGGCTA
TGAATTACAATGGTAA
PEP:
>DPO007187-PA
MVLDVVAGVKGVALHLSVLFFEASCGSVTQMCRVLMNCPEIVSIGLVWNSDKPSLDHIMEVFSCVNTTLQLKDVFSTVTD
SRWAETTTHNLVGMVTYYGKHYSTFFFHTKLMEWIFLDDATLRDVGPRWEQVVEKCRRRKFQPLLLLYATPDGTPVNPEY
APKSNTPFYTDKNKPPLPMGKQLLRRSITPSPEKPIVGNTRRAITPNPESCTLSQKPQFPKSYNEYQNLSVIQKNINIPK
DSIGFDQVDECAQKSLEYITRKSTDSENPTVNIPRTLSNGSSSGVESGVCILDHLNIPRRRDSGNWSRDRNSASXXXXXX
XXXXXXXXVGKVPPGGPNRTKGDGNGAYDAGYDSYSLSSNDSTNMSTVQHMMKSGHLAQIPEDYSNMVQNPNALSCDVLC
DEADELLIKSRQLEDAHDLVLALALCNAAATKARAAMNAPYNNPQTLTLARMKHNTCIMRARSLHRRMTQMQPQNKENSL
EIRHTREGSSGSGRHSRQNSKDKGHHSRQSSRELLLQQDKEKSKPIKSIEIYATLPKKKDVLKAKLNDINIDNEENMIYV
KAPERESRSIFSRSKNKDNKSKEKRSPSEDRNKINRGDFSIAPDLRAAQDTLKKAKEIKEEKKDKEGKTKKQHKIRRKLL
MGGLIRRKNKSLPDLTDSNAEDQCQCPRSADDTTVGLRASPKTLNQGMTGYVSEGHLEVSGATSNPNLERSKLMRKSFHG
SAGKILTVAKVPPPPPLRTTSQLSRSKSNISEVADKCQFNIYGDVNIYHNLAPFNQPQEEQSSMSLPYYGHSNSSYDDDS
YSPSSHIVITQAEVHHEHSAQSANADVSSGVDEVDCCPSQWAPLMDLPPYPSPSGSAIHSRQASEDFPPPPPPLDLSVLD
EHLPQVQLKEQCSLKEEPETLLGQLQNKRLQILTHENDNRVLKQPNIYPQNSVRSTGDTWLKELQAKQAVLRTKLNENVS
NSDGGRDEVNTQRFATGENKVKSVKDLASKFEHVLDVSNGQLRHQATLPKAVNTNSQPMFKNNEYHTIAPEQIAEEIREV
EMITSAVNKVFGNDQPENSDESKKLRHQKKKSVSFCDQVILVATAEDQEEETYIPNPILERVLRSAVNNPETTAIRQELM
ALRDKNGINQSPSIVPQSSKLASSKPTTLTPEIIAMNEGQTLPLRRNSLENLLQETSTRLPHQMLYNGEIPIEQRFLSLP
QSHQPYQQNVNLPQLNSDEHYYPYNGYELQW
Swiss-ProtInactive ubiquitin carboxyl-terminal hydrolase 54
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
CoilsCoil

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