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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO006945
PositionSeq_1102669:1576615..1582322[GBrowse]
sequence mRNA:
>DPO006945-RA
ATGGTACAGCTAAAGAGGCGTGAATTCAAGATGGTGAAATCAGAAGTGAACACACCCAACAAGCGCAAGAGTCTCCAGGC
GAACTCTTCCGCCAAAAAAACTAAGGTGGAGAACGGCAACGGAGTCGCGAGTCCAACAAAACTCGTGAGTATTAAGAAGG
AGCCCCATTCCCCCAAAGGCGTCCAATCGCCCAAAATAAAAGTCGAACCAAGAAATAGTCTACCCAAGGCCGGTCAGTCT
CCCAAGGCTTTTCAATCTCCTAAGGCTGTTCAATCGCCTAAAATAAAAGTTGAGGGAAGAAATAGTCTACCCAAGGCTGT
TCAATCTCCCAAAGCGCCAAAACCGGTGACGCCTTCTCCTCAAGCCAACAAGAAAAATAAGAAGGGCAAAGCTGGGGGCG
ATTCCCCGAAAAAAGTGACATCGTTTGCGGGAACCAAACAGCTCACTAAATCCATTGAGAAAGTGAAGAAGCCCAAGGCT
ACACTCGAAGCCGGTGAGGGCAAGAAGAAAAGGAAGAACGCATTTGCAAACTTGATTGCCCAAGTGAAGGCCAAGGAGGG
CACCAATGATCCTGAACTCCTTAAGATTTTGGACATCAGGTTAAACGCAATCACTGAAAGGGGCGATCTTACAAAAACAG
CTAAGAGGAAGCTGAGCATCCTTAATAAATTGAAGCTGATTTGCACTGAAGGTTCAACAGCGGCCAGTCAAAAGGCTAAA
GCGCAGATTGCCGAAAAGAAGAAACTGGGCTCCGAGAAAAAACTTCAGAAGAAACCCGTAGCTGCAAAGAAGGCAGCTGT
AGGCAAAAAGGCATCTAAGTCCCCGGCTCCAGAACTTGCAGACAGCGAAGATGACGAGGAGGAAGAAGATGATGATGACG
ATTCTGAGGTTTCTGATCATGACTCAGATGCCGAAGAGGACGGTGACAGTGCGGAGGAGGAAGAGGACACTGATGCGGAA
GACGACGACGACGATGAGGATGATGAAGAGGACGATGATGGTGAAGAGGCCGAGGAAGAGGAGGACGATGAGGATGACTC
AGACGAGGAGGAAATTCCAGTTCCCGCTCCCAAGGAAAAAGTCCAACCTGTACTTCCTAAACCAACGCCAAAACAACCGA
CCATCACCGACCTGTACAGCAAAGATATCGTTAAAAAAGGTCAGAAACGATTCGTGTTGTTTGTGGGAAATATTCCTTAT
GATGCAACTAAAGAAGAACTTGCGACGCATTTCGCTAAAGTGGGCGATATTGTGGACATTCGCATCCCTACAGAAAAGGG
CAGTAACAGGCCGAGAGGCTTCGCGTATGTTGAAGTGAATAATGATACTTCATATGAGAAATGCATGTCGATGCACCATT
CGCAGCTAAGAGGCCGAAGAATCAATGTGCTATACACCCAAGGAGGTAAGAAAAAAGGGGACGAGAAAAAGAAGGAAATC
AAAGGAAAAAATTTTAAACTACACGCTCTTCGCAGACAGGGCAAGTTGGCAGGCAGTAATATCAAAATGGTTAAAGCTGG
AGTAAACACACCCAACAAGCGCAAAAGCCTCACTCCAAATGCGTCAGCGAAAAAACTTAAAGTGGAAAACGGCAACGGTG
CTCCGAAAAAACAAGCCCAATCCCCCAAAGGCAAACAGCAATCAAACAAAAATAATAAAAATATCAAAGTCGAGTCCAAT
GATGAATTACCGAAAATTGCCCCCAAAGGCAAACAACTGAATAAGAGTAACCAGAATACACCGCAAGTAGCAAAAGGGAA
GCAACAGAAAAACAAACCCGTCAAAGCCGAGGCTACTGAATTGGCCGAACCCGCCGTTGCGGCTCCAAATGCAAACAAAA
ACGTTCAACAAACCGAAGAAGCGCCTAAAAATGCGAAATCTGCCACTGCCAAGCCTAAAGGGCCCAAGCCTAAAACGCAA
GCGAAATTAGCTAAGGATGGAGCCCAAACGGCGGAAAGCAAGAAGACAAGGAAAAACGCGTTCTCCAACTTGGCTGCTGA
AGTAAAAGCGAAGGAAGGCACCAAAGACGCTGAACTCAACAAAGTGTTGGACACCAGGATAGCCGCAATCACTGTACGGA
AAGAGCTCACGAAAACAGCTAAGAAGAAGCTGGGCATTCTTAATAAACTGAAAATGATCATCAACGAGGGCTCAGCCGCT
GCCAGCGCAAAAACTAAAGCTGAAATTGCGGAAGCCAAGAATGCCGCTGCGGACGAGAAGCTGCAAAAGAAAGGACAGCC
TGAGAAAAAGGCAGCTGTAGTCAAAAAGGGTAAGGGGTCTAGCAAACAAGTTCCTGAAGATGATGGTGACGATGAAGAAG
AAGATGTAGATGAGGAGGGGGCGTCTGAAGATGAAGATGCTGCTTCTGACGAGGAATCCGACGACTCAGACTCATAAATC
AATTGTCAGTAGCTAATCCCTTGAACTTTGGTTACTGCGTCCAAGGTATAAGAGTATACAACAAAATGTAAAATTTTTAT
ATTCATAAGGTAAGATAAGTATGTTACTTAAGCAATTTTAGTTCTGTTAGAACGTGTATGGGTGTTTCTTGTGCATAGAA
AAACCAATATACGTACGTCCAAACAGTGAATGTTTCATTAATTAAACCCAAAAAAGGCAATGTTTTAAGAATATGTCTTA
GCGACATTTATTTGCTTTATTTCGTAAATTTTCGCAAAAATGTTTTGTAATATTCGACAATTTCGGTCAGTTAAGTTACA
ATACACCAAGACGTTCATAATGTCGAGTTCTTGTGGTTCTTTGTGAACGTCGCAAAATCGCCCCAATAAATTTCAATATA
ACAGAACAAACAA
PEP:
>DPO006945-PA
MVQLKRREFKMVKSEVNTPNKRKSLQANSSAKKTKVENGNGVASPTKLVSIKKEPHSPKGVQSPKIKVEPRNSLPKAGQS
PKAFQSPKAVQSPKIKVEGRNSLPKAVQSPKAPKPVTPSPQANKKNKKGKAGGDSPKKVTSFAGTKQLTKSIEKVKKPKA
TLEAGEGKKKRKNAFANLIAQVKAKEGTNDPELLKILDIRLNAITERGDLTKTAKRKLSILNKLKLICTEGSTAASQKAK
AQIAEKKKLGSEKKLQKKPVAAKKAAVGKKASKSPAPELADSEDDEEEEDDDDDSEVSDHDSDAEEDGDSAEEEEDTDAE
DDDDDEDDEEDDDGEEAEEEEDDEDDSDEEEIPVPAPKEKVQPVLPKPTPKQPTITDLYSKDIVKKGQKRFVLFVGNIPY
DATKEELATHFAKVGDIVDIRIPTEKGSNRPRGFAYVEVNNDTSYEKCMSMHHSQLRGRRINVLYTQGGKKKGDEKKKEI
KGKNFKLHALRRQGKLAGSNIKMVKAGVNTPNKRKSLTPNASAKKLKVENGNGAPKKQAQSPKGKQQSNKNNKNIKVESN
DELPKIAPKGKQLNKSNQNTPQVAKGKQQKNKPVKAEATELAEPAVAAPNANKNVQQTEEAPKNAKSATAKPKGPKPKTQ
AKLAKDGAQTAESKKTRKNAFSNLAAEVKAKEGTKDAELNKVLDTRIAAITVRKELTKTAKKKLGILNKLKMIINEGSAA
ASAKTKAEIAEAKNAAADEKLQKKGQPEKKAAVVKKGKGSSKQVPEDDGDDEEEDVDEEGASEDEDAASDEESDDSDS
Swiss-ProtUncharacterized RNA-binding protein C365.04c
KEGG     K14789     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:3.30.70.330     
PfamPF00076  RRM_1; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00360     
ProSiteProfilesPS50102  RRM; Eukaryotic RNA Recognition Motif (RRM) profile.     
CoilsCoil

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