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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO006092
PositionSeq_1101838:561249..571001[GBrowse]
sequence mRNA:
>DPO006092-RA
ACATTCAGAGGTGGTCTGTGTGGTGATCTACGATCTACGGAATACAGAAGGGTTTGGGTTGATGGCTATTTACTACAGTG
CAGAATAAATGGTTAATAATGTGTTTTAATGGTTCTTTCGTTGAGCTCTTTTGAACAGTTCGTGAACATTCAGTAGCTGG
AATCGTAACCACCTTGTGATATATAGACTGTGAGTTAATTGATAGAGATCCAGCTCCAACAAAAATGATCGTGGATCAAA
TAGAAGCCTTTAAAAGTTGGCTGACAGCTGTTCTGAAGCCCATGTGTGAGGCTGATCCAGCAGCGTTGGCGAAATATGTG
CTAGCCCTTATTAAAAAGGACAAGTCAGAAGCAGAGCTTAGGAAGAGCATGGTTGGACAACTTGAAGTTTTCTTGGAAGG
AGAAACAGAAAATTTTGTGAACTTGGTGTTTCAAACATTGACTACTAAAGATTACATCGGCACCCCAGTGATACCAAATG
CTAATCCGCCAAATCCCATCACCCCGACCAAACCAAAAGAGGGGAGGGAAACCAAAGTGATAGTTCCGCCCAGTGAACTG
CCCAACCTAAGTGAAGTGGTTAATGGCAACAGTACAGAAAAGAAAGAGGTGAAAAAGGACGTTAAGAGCAGAAGAAATTC
TGAAAACGGGGAGAAAGAAGAAAGGTTAGCCCGAAGAAGGTCTAAACATAGGTCGCTGTCACGGAATCGCACCAAATCTC
GCTCTAGATCTTGGGATCGAGTGAAGCGATCGCGTTCAAGGGATAAGTCTCGCGATCGAGTTGACAGAGAATTACATAGG
CTGGACAGAGACAAGAGGGAAAGAGACCGAGTGAGACCCTGGAGAAATAAGTCCCCAAACCGCAGATACGAGAGAAGACG
TTCACGATCGCCACGTAGTGGAAGTCCTCCAAGGATGCGCTCCAGATCACGAAGCCCCAGACATTCACATCGGGCTCGTT
ACCGCAATAGTCGCAGCCGCTCCAGATCTACCGAGAAAAAAGACAGGAAAGATCCAAAGGATGTGAAAAATCAATCCAGA
CCCGGGACACCTATTCAAGATTCAAATCATACAGAAGCCGATTTACCATCACAAACTGTTCCCAGTGTCGTTGTCCAACC
AAACGCATCTAAACGCCGTTGCAGGGACTTTGACGAGAAAGGTTACTGTATGCGTGGAGAAATGTGTCCATTTGATCACG
GTATCGACCCAGTCGTTTTGGAAGATTCTACCTTAACTAGAGTTCTGTCGTACAATCCGAATGGAGATGTGACTGGCACC
TTAGCAGGAGGACCGCCCATAACTTCAGTGCCGATTCCTCCAGGAACGGTAGGCGGTCCACGACATCCTCCGGACAATCC
GTATAATCCTCAAGCTCCTCAAATGTGGAGTGGAGGCCGATTTAGAGGTCCCCGACCAATGGGTGTTCGACTTCCTGGCA
TAAATCCGTTTTCGCAGCCTCCTCCCGGATTGGGGATTCAACGCGAACTTATACCCGTTCCGCTAGTTATGGATAATATG
AAACCACCAGGAGTGATCCGGCTTGGACCTAGAAAACACGCCGGAAATTGTAGCCTCGAGCTGAAGAAAGTTCCCACTGG
GATGAATACCATCACTCATCTCAATAATCACTTTTCGAAATTCGGCAAAATTGTCAATATTCAAGTGAACTACGAGGGTG
ATTGTGAAGCAGCTTTAATCACCTTTTCCAACCCGGCGGAAGCAAACAGCGCTTATAAGAGCACAGAGGCGGTGCTGAAC
AACCGATTTATCAAGATGTTTTGGCATGACTCTGATAGTGGCAAACAGGAAAACGTCCCTCCTGTGCAACAGCACGCTCG
TCAAGACCCGCTCGTAAACGTTGCTCCTAATAGTAACAAGCCAAAGGCTGATAAAACCGAAGGGGAAAACAAGGAGGAAA
AAGGCGAGCTTAAGCCTGAGTTAAGCAAAGAGGAAACCAAAGCTCAAGCCACTGCTGCAATTCACAAATATCAGGATTTC
CTAGCAGTTCAAGCTAAGATGAATAAAAACAAAGATGAACAGCGCAAGGAGGTGTTGCAAATACAAAGTAACTTGAGGAA
ACGAAAGCAGGAGCTTCTGGATAAGCAACTGTCCCAGCAGAAGATTCTCGTGGAAAAAATGTCCAAATTACCTCCTGGTC
CTCAACGGGATATGATTAAAAATACAATAATGAAAACACAAGAAGCCATAGAAGCCATTAAGAAGGACTTGGAACAGGCC
GCATTGGCAGCGAAGGGTGCTGTTGCAGGATCTACAAAAAGCAAAGAGGAAACACAAAAGGAGCTACTTGATATGGAATT
AGACCTTATAGCGAAACAGCAAGAAGGCACCGATACAACCGAGTTACTGAAAAAAATGACTGAATTGAAGGCCAAAACTG
CATTTACGGGTTTTCCAGCCAGAGGCCGTGGTAGGGGTGGTTATCCTGTCTCTAGTAGGCATCTAGTGGTCAAGCATAAC
TTTGTGGACAATACTTTCAAACCAACAGGCAAAATTAAAACGGTGAATAAGATAATCAATAATGCTGCATTAAAATCACC
ACCCGCTCTGCCCTCGCCGCAACTTACTACAACGACTTCATTTCAAAAGCACGTAGTTGATCACAGACCGACCAGACTGT
TGGTATCAGGGTATGAAACTGATGAACAGGACGCGGTTGTAACTCATTTTCAGCAATTTGGCGAAGTAGTGGATTATTCT
ATTGATTCATCTTTACCGAGTATCACTCTGAACTACAAGACGAGAATTGAAGCTGAATCTGCTCTGTTAAAAGGCAAACA
CTTCCAGGATCGCACCTTGTCAATCACCTGGCAGTCTGGACCGCCTAATCGTTTGCAGACTCAAAAGAGTGGAGGACCGG
CTGCGAAAACGGTTTTGCTGTCGGAATCGGAAGAAGATCATCTGATTGATCAGAATATATTAGAAGGGGATGAAGAGGTA
GGACCGGAGACGGAAGAAGCGCTTCTTCAAGATGATGAAGAGGAAGACGAGGAAGATCGCTCTTGGCGCAGATAAGTCTC
CCATTTATGTTTCATATAAGATCTGTATTTCAAAACATCCTTTTCTGGTGAATATTTGTTATAAAATATGTACATATTGA
TTCAACCTTTTCTTATTAGAAATTGATTTATACGCGCTGCCATCTAGAACCCACTTTTCTCTAATCTGGTTTGTTTATAT
CTTAGCATGAAAATACTGGTGATTACAAAATAACTACCGGTTGTTTCACATGCTGACTTAAGTCATAAAAAGTTGACTGT
AAGTTGACTAATTCTTCTCAGCCTATGTTAATCCACTCCTAACATTTGCTTATTTTGAAATACCTTAATTCCTTTGTACC
TCTTTATTGGGTTAATTGACATATTGAGTTTTTAACTTTGAGGACACAATTATCGGACCAGACAGACTAATACTTTTTTT
ATTGCATTCATTGATTGCGGTGCAGAGATAAATCGAAACCAGATTGTAATCATGCAAAAAATAACTGTATTTAGACCCAC
TTGATTTGTTCCTGAATATGTTAATTGAAGGCTTCTTTCCGGTCTTTGTCCCTTGGTTAGTTAAGGGTAATTATTCTTGC
ACAATCTAACCCCGTTTATACCTTGTACAAAGCACGTTCCAATAATATGTTTAGAATGTGGCTTATTATAGTCGTTTGCT
TTAGTTGGTATAAATATTCATCAAATTTTTCTCCTATGTATTTTTAAGTTGTTGTGTGAGCCAAAAATCTGCATTAGGGG
CTATTTGCTCGAAATCAAGTATTATCAAATTGACCATTTATGGTTAACTGATCTGTTATTCGCAAATTGTTTTACACCTG
TTTGATACTAATTGTATGCAAAATTCATTCTCAAATTAGCCTATTTGCTTAGGCTGTGGTAAAACAGGTGCAGATACCAA
ATCACAAGTATCAAAATTAATTGGCAAGTTAATATGGATTTTTGGTAGTAATGTTGTACAAAACCATACTGACCGCATTT
TGAAAAAATATTAAAAAATACCTACATCGTACGGCCCCGGTAAAAAAAGAAAAAACATTCGGTCAAAACAACTATGAAAA
AATAATAGGTAGAAAAACATATAGAAAAAAGATGTATATTTTAATAAAGGTACTGATTTTGGGGCGTAGAAAAAAAAACA
AAACAAAAATAGTTATGAAA
PEP:
>DPO006092-PA
MIVDQIEAFKSWLTAVLKPMCEADPAALAKYVLALIKKDKSEAELRKSMVGQLEVFLEGETENFVNLVFQTLTTKDYIGT
PVIPNANPPNPITPTKPKEGRETKVIVPPSELPNLSEVVNGNSTEKKEVKKDVKSRRNSENGEKEERLARRRSKHRSLSR
NRTKSRSRSWDRVKRSRSRDKSRDRVDRELHRLDRDKRERDRVRPWRNKSPNRRYERRRSRSPRSGSPPRMRSRSRSPRH
SHRARYRNSRSRSRSTEKKDRKDPKDVKNQSRPGTPIQDSNHTEADLPSQTVPSVVVQPNASKRRCRDFDEKGYCMRGEM
CPFDHGIDPVVLEDSTLTRVLSYNPNGDVTGTLAGGPPITSVPIPPGTVGGPRHPPDNPYNPQAPQMWSGGRFRGPRPMG
VRLPGINPFSQPPPGLGIQRELIPVPLVMDNMKPPGVIRLGPRKHAGNCSLELKKVPTGMNTITHLNNHFSKFGKIVNIQ
VNYEGDCEAALITFSNPAEANSAYKSTEAVLNNRFIKMFWHDSDSGKQENVPPVQQHARQDPLVNVAPNSNKPKADKTEG
ENKEEKGELKPELSKEETKAQATAAIHKYQDFLAVQAKMNKNKDEQRKEVLQIQSNLRKRKQELLDKQLSQQKILVEKMS
KLPPGPQRDMIKNTIMKTQEAIEAIKKDLEQAALAAKGAVAGSTKSKEETQKELLDMELDLIAKQQEGTDTTELLKKMTE
LKAKTAFTGFPARGRGRGGYPVSSRHLVVKHNFVDNTFKPTGKIKTVNKIINNAALKSPPALPSPQLTTTTSFQKHVVDH
RPTRLLVSGYETDEQDAVVTHFQQFGEVVDYSIDSSLPSITLNYKTRIEAESALLKGKHFQDRTLSITWQSGPPNRLQTQ
KSGGPAAKTVLLSESEEDHLIDQNILEGDEEVGPETEEALLQDDEEEDEEDRSWRR
Swiss-ProtRNA-binding protein 26
KEGG     K13192     
SUPERFAMILYSSF90229  CCCH zinc finger superfamily     
Gene3DG3DSA:4.10.1000.10     
PfamPF14605  Nup35_RRM_2; Nup53/35/40-type RNA recognition motif     
SMARTSM00356     
ProSiteProfilesPS50102  RRM; Eukaryotic RNA Recognition Motif (RRM) profile.     
CoilsCoil

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