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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO005759
PositionSeq_1102902:167653..176652[GBrowse]
sequence mRNA:
>DPO005759-RA
AACAGGGTTAGCAGGAAAAATTAGAGGTTATGCTAGTAGTAATTCATCAAAACCAAAACAATGGCAAATAACTTAGGAAA
GTACCAAATCGTAAGCTTGGGGGGTTTATCAGGCGATCAGTGCTCGACACACGGAAAAAGGCGAAGATCCCCCAATTATT
CCGATAAAGAGACTCGCACCCTCTACAGCCTGGCCCTGGCCCATCTGGAAATAATTGAGAACAAGAAAGTGGACGCAGAG
ACCTGCCGACGAAAGGATTTAGTATGGAACATCGTAGCTGAAAATTACAATAAGTGCTTCGGTGAAAATAAACGAACAGT
TGATCAGCTTAGGCATAAGTACGACAGTATCAAGAAGCTTGCCAGAAGGAAGCGGCTCAAAAACCTGGAAGAACTAAAGG
AGGGCAAAGTGGCACCGAACGTCACAGAACTGGAAGATTACGAAAAGGAATTGCTTGGATTGCTGGAAAATCAGGTCGTC
AATACCAGCCAATCGCTGAGTTTCATTGTTTTATCTGAATCCGAAGACGATTCAGAATCCAAAATTGAAACCACCGACGA
TATCAAGACTGAATATAACACAAACATTGACAGCCCAGAACATCCTGTAGAGGAAGGTTCTGTGATTCACGGCTCTGAGG
AATTGACTGACGAGCATTTTGTCATAACTGATGAAGATGCGATTTGGGACCTACCGAGTGATCCCTCGAACAGGCCTCAA
TTGAACTTAATGAAAAAACAGTTGGAAATGCTAGAAAGACAAGAGCAGAGGCAAATAGCTGAGCACCGGCGCAAAATGCA
AACGGACAGGATCAAAAGAAGATTTTTCTTAAATCAGGAGAAAAGAGCCAAGATACTGCACGAAAAAGAAATGTCTCTTT
TAAATCTGGAAATAGCGACGCTGTATCCCCCGGTTGGTGTTGGAAGGAATATGGTGCGTGGAAGAGGGTACTCATCTAGA
GGCAGCTCTTATAGAGGCTCCAACAGAGGGAGTCCCTGGAACGGAGGTTACGGAAGAAGTTCTAGGGAGCACTATTCGTA
TGATAACTATGACAAGGGCAGATTCAATGAAAGGTACACCAGAGAGGAGTACCCTAAGCCATATCGCATGGATAGTTACT
CGCGGGACAGACATTCTCCGGAGAGAAAACGGCCCCGAAACGATGGTCCATCGAGACACGAATACAGCAGTCGGTACGAA
TCCTATCCGCCAGAAAGAAGGAGCTATTCCGATGACCGAGATAGGCATCTCACATCGCCCTACTCTTCGAGAAGGGAAGA
TTATCGCAAACCCGTTCCTTCTCCCTCATCGCCGAGGGCTGGAGGCAGGGGCCGCCTAAGCTCACGTGGCACTCGCGGAT
TTAGGCGAGATAGAGGAGGAGTCCCAATAAGACGAAGGTTGGCCGTGAGCTCATACGTTATTAAGAAACGGGGCGTGATT
AGAGGCGATTATCATTCAAGGCGATCTAATTACGTGAGAGGCCGGAGCAGCATGATCCGACGCATACGCGACATTCTAAG
CAGTGAGAAGGAGTCTGTTGAAGATGAGGTAACGCTGAAGATAAAGAAAGAACCCGATGACAAAACTGCTGTACAGGAAG
GCATCGAAGTAAAGACCGAGCCTGTCGAAGGAGGGGACACTAAGGTGGAGAAACTAGCTGACACCGTCCTCAAAGGAATC
AAGTCTGAGGACATAAGCAAATCACCAACTAGAACGTACGTGAAGCTGCTATGCCCACAGTGCAACATTAACGTCCCGAC
TTTTAGTCGCTACGAATCTCATCTTCACGGCAAAACGCATTTGTTTGCAATGAGAAAAGTTGCGGCGAAGCAGCGTTCAA
TTTTGAGTATGTTACCAGCATTTTTAAACAAACCAAAGCGTCAATCAAAACTTCGTCCCTTTGCAGCTCAGATGCGGCAG
GCTCAGCGCAATTCGCAGAACGAGCTGGAGAAGACCGCCGACGGAATAACCGAACACACGGTCTTTTGCCCATTGTGTAA
GCTGAACTACAAGCAGGAACGTGCCGTGCATCAGGCCACGCCTGCCCATAAAAACATGAAAAAGTTCTTGTTACCCACCT
GTAAAGTGTGCAAGATTAACTTCAAAAGCCCCATGGTGTATGAGCATCATTTGTGCAGTGTTCCACATTTGAAGCGCAAG
CAAAAACTGGAAGAAACAGCCGAAGAAGTAGCTGAAGAGGACAATCTGGAGGAATTTACGACCATTGATTCGATCGGAGA
GGTTGGCGATGAAAATACTGCTTCGGCAGACGAAGCTGAGAGGGAAGAGCGCAGGAAGAGAGTATGTGTGGGTGTGGAGA
AAATCAAGAAAATTGAAGCCCATTATTGTGACCTGTGCCGCATGTTCCTTCCAAGAGGAACAGAAAATGAGTATCCAGAT
ATATTGGCAGGACATTGCCGGAAGCGATTCCACATGCAACGCTTCATCCGATTTAAGGAAACCCAGCAAGTGAAGAAAAA
GGCCGAAAAGCTACAGCGCAAAGAGTCAGCTGAGAAAGAACAGAAAGACGAGAATAGCGCTCAAAAAGACGGCGAATCTG
ATGCGACTGAACGGACGGAAACGAAGGAAGAAGATAGCAAAGATGCGGACACTTCCAAGAGTGCCGATGAGGATAAATTG
TGGGAAGCTGTTGATAAAGATTTGGGAGAACTGCTAGAAGAGACTGATGGCAGAGAAGATGACGAAGACGAAGAGCGAGC
TAATGGAGAGCGATATGACCGATTTGGACGTGCGGAAAAAGAGAACGAAGAAGATGAGGAAGAAGTCCCTGAAGCGGAGG
CAGCTCCAGACACCCATCTTCCGCGCGCCACCACAGTTGGTGAAGAATATCGGCGCAAAGATGCGTGGGTGCCTATGGAA
AGAACTCGGCGCGTCTTGGCCGCCAAGGCCTCCCGACATTCCCTTAAAACCGACCTGGAAATGCTCACCATGCCTGGAGT
AGGTGCAGAACAGCGCCGGGCGTTGGAAAGTGAAAGCTTTTGCTTGCAGGTGCTGGTGGATGAGGAAGAAGAGCTGGGAG
AGCCGATTGTGCGTTGCTGCAGGGAGGCCAGGGAGAGTTGCAGGAGGGGCAGTCTCACCCCTAGTCTGACGCCTAATGAG
CGCCGACTTCGGGAGCTGGTTCATATGGGAGCCTACGGAGCCGCCATCAATCACACTGCCATGCTTTTGTCGTTCCATGG
ACAGGGCCGAGGACGTCAAGGCCACCCGACAATCCACACGCCCCAAAGCCTCCAGCTCTGGTATATCAGAATTGCGCTGC
TGGTCAAGACCAAGTCACTTGCTGTTGCTCAAGCGGAAGCTCAACCATTCAGCCAGTTGGAGAAGCCGGACATTTTCTAT
CAGTATTATCCCGAAATGTACGGGGGCAGGACTGGATCGATGGCTTCGTTCAGTTTCCGGCTGTTGCTCGCTGAGCTCCC
GATGCACGCGGGGAAGCCCAAAGACGCATTGCGACGGTTGTTCTGCATGTGGGCGGCCATCAAGCGAATGCTCAACAACC
TCAAGCAAGGCGTATGTGAAGATGGCAGCGCCACTGAACTGGAAGAAACGGACAGAGCGGAGTCGTTGAAGCTCTGGCGA
AGCAGAGAAGCCAAAGTGATCTACTCCATCATCAACTGCGCCTGCTACGTGAAGGATTATGGCCTGGCCATGGAACTGTT
GGCGCAACTAATCGAACGGTTCGTATGCCTGAAGACGCAATTTGAGGGCGCATTAATACTTGAGCGTTGTTGCAGTGAAG
ACACTCCCAAGCACATGTTGCTCTCGGCTTTAGGGCGGCTCAACTTGCAGACCGGAAACATTGCAGGAGCTGAAATCTGC
TTCAATGAAGCGTATCTGTTCGGGTCCAGTGGCGTGCGCGAGCTAGTGGATCGGGGGCTGTTTGCTACCGCCCAGGGTAA
CTTTGAGGAAGCTTGCGCTTGCTTCCAGCAGGCCAGCTCCTTGGACCCCTCGAACCTCATGATTCTGAACAACTGGGCGG
TTTGCATGCTGCATGATGGTCGCATGCAGGAAGCGATTTCCGTGCTGGAGACTGCAATCGCTTCAAAACCGCTGGAGAAC
CTGCACGAGTCGTTGGTGTTGAACTTGTGCAGCCTGTACGATCTGCAGTCCTCCAAAAAGGGGATTATGAAGAAGTTTGC
GCTTTTGAGGCAAATCTCCAAGTACAGTGCTGACGCTCCGACCACCATTCTGGAAAAGCTTTATGGATGAGCGGGGTTGA
AAACCAATCGTATTCCGTCCAAAACTGCCCTGCTATGGCTCCTGCACTAATTTATATAAATAAAGGTCTTATTGCGAAAA

PEP:
>DPO005759-PA
MANNLGKYQIVSLGGLSGDQCSTHGKRRRSPNYSDKETRTLYSLALAHLEIIENKKVDAETCRRKDLVWNIVAENYNKCF
GENKRTVDQLRHKYDSIKKLARRKRLKNLEELKEGKVAPNVTELEDYEKELLGLLENQVVNTSQSLSFIVLSESEDDSES
KIETTDDIKTEYNTNIDSPEHPVEEGSVIHGSEELTDEHFVITDEDAIWDLPSDPSNRPQLNLMKKQLEMLERQEQRQIA
EHRRKMQTDRIKRRFFLNQEKRAKILHEKEMSLLNLEIATLYPPVGVGRNMVRGRGYSSRGSSYRGSNRGSPWNGGYGRS
SREHYSYDNYDKGRFNERYTREEYPKPYRMDSYSRDRHSPERKRPRNDGPSRHEYSSRYESYPPERRSYSDDRDRHLTSP
YSSRREDYRKPVPSPSSPRAGGRGRLSSRGTRGFRRDRGGVPIRRRLAVSSYVIKKRGVIRGDYHSRRSNYVRGRSSMIR
RIRDILSSEKESVEDEVTLKIKKEPDDKTAVQEGIEVKTEPVEGGDTKVEKLADTVLKGIKSEDISKSPTRTYVKLLCPQ
CNINVPTFSRYESHLHGKTHLFAMRKVAAKQRSILSMLPAFLNKPKRQSKLRPFAAQMRQAQRNSQNELEKTADGITEHT
VFCPLCKLNYKQERAVHQATPAHKNMKKFLLPTCKVCKINFKSPMVYEHHLCSVPHLKRKQKLEETAEEVAEEDNLEEFT
TIDSIGEVGDENTASADEAEREERRKRVCVGVEKIKKIEAHYCDLCRMFLPRGTENEYPDILAGHCRKRFHMQRFIRFKE
TQQVKKKAEKLQRKESAEKEQKDENSAQKDGESDATERTETKEEDSKDADTSKSADEDKLWEAVDKDLGELLEETDGRED
DEDEERANGERYDRFGRAEKENEEDEEEVPEAEAAPDTHLPRATTVGEEYRRKDAWVPMERTRRVLAAKASRHSLKTDLE
MLTMPGVGAEQRRALESESFCLQVLVDEEEELGEPIVRCCREARESCRRGSLTPSLTPNERRLRELVHMGAYGAAINHTA
MLLSFHGQGRGRQGHPTIHTPQSLQLWYIRIALLVKTKSLAVAQAEAQPFSQLEKPDIFYQYYPEMYGGRTGSMASFSFR
LLLAELPMHAGKPKDALRRLFCMWAAIKRMLNNLKQGVCEDGSATELEETDRAESLKLWRSREAKVIYSIINCACYVKDY
GLAMELLAQLIERFVCLKTQFEGALILERCCSEDTPKHMLLSALGRLNLQTGNIAGAEICFNEAYLFGSSGVRELVDRGL
FATAQGNFEEACACFQQASSLDPSNLMILNNWAVCMLHDGRMQEAISVLETAIASKPLENLHESLVLNLCSLYDLQSSKK
GIMKKFALLRQISKYSADAPTTILEKLYG
Swiss-ProtTrafficking protein particle complex subunit 12
SUPERFAMILYSSF48452  TPR-like superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF13414  TPR_11; TPR repeat     
SMARTSM00028     
ProSiteProfilesPS50293  TPR_REGION; TPR repeat region circular profile.     
CoilsCoil

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