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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004906
PositionSeq_1099779:1313..9384[GBrowse]
sequence mRNA:
>DPO004906-RA
GTTCTTCTGCGCAATGCTCTAAATTATGAAGGGGAGGAATATCAATCTGAAATTCAGGAAATGATTTTGGAAATTGTGAA
GCAATTAGAATTTGATGGCAGTTTTATTTCTGATGTGCTAGGTTTGGTACTCAACAAAGTCGACAGTGAAGATCTAGCGA
AGAATTGCCCCACTAGCTGGTTGCAGGACATTATCAAGCAACTCCAACTAAAATATAAGGTACAGTTCGATGAGGCTTTG
AAGGATATTCCAGAGACGAAAATCTCCACAGATGGAAACATAGCCTTGAACATTTGCATCGCTGGCTGTTTTGAACCTGT
CACAATTTGTAAAATTTTACGTTATGTACTGCGAGACAAGCCAGACACTTGTCTTAATGGCATTTATGTGTTAATCATGC
TCTCCAACAAAGACCCAACTATACGAAAATTGGTGTTCGATATAATTGAACAATTCGATACAACGCATAAATGGCTGCTT
CAGCAACTCTCGAACCAGCAAGAACGAATACTGGCTGATAATGCCCAAGTTGGTTTATTGTTAACAGACATTTTAGCTCA
CAGAACGAGTAGTTCAAACAAAGCAGCAGTTAATTTGAATCAATTAATGGAAACAATTTGTAGTAATGATACCCCTATGT
ATGTCAAGTGGGGCATTTTAAATTGTCTATCCGAAGTAAAGAAATTCGATATTGTCCAAACGCTTTGTGAACACTTCGTG
AAGCTGTTTGAGAACAAGACACTCGATCAGTGCGACTTAAAAATACTGACAAATATTGTTAGGCGACTAGATTCGAACGT
TATGGCCCAAATGTCTCAGAATTCTCCAATTTGGCATTTTGTAGTTTTTGTTCTGAATCAAAAACGTATTGTCATTATTG
ACGAAGAAAAAATATATTTGCCAAATTGTATGCTGAACCAACTCTCACGAGACGTCTCCGCGGTACTTCCAGAAGATGTA
TTAGAAAACCTGTTGGACTTGGTATGTGAACAAGTGGCCTTATGCGAAGAACCGGAATTTATTTCACTATCCAGTAAGCT
GTTTAAGCATCTGGACTTAAATGCGAAAATTATATCCAAAATCTTAGTGCAAATGACTTCAATTAATAGTTCAAAAGGAA
GAAACAGGCGAGGACTTGTTACGCCTACAGTTGATATTCTAGACTCGGTGGCATGGAAGAAAGGAGTAAGCTTACTGGAG
TTTATACAGAGCAAGAAAAAGATAAAGAACCCTCAGGTTCTTTTACCGATTTTATTTGATGTACTCAAAAAGTGTCTGGA
CTTTGAGGAGCAAGCTGTAGTGGAGTATCCAAAGCAACTAACGCTTGCCCTAGTACTACTAATTTGCTGCAATGTAGATG
AGAATTATGTGTCAGAAAGTGACTTCAATATAGAATTAGTGATCCAGTGTATTCGAGCCTCTCAGAATCCACAAACACAC
TACCATGCCCTGTTAGTGCTGGCACATGCAGCCAAAATAGTACCTAAAGATGTACTTCACCACGTTATGGCAGTATTCAC
TTTCATGGGTACCACATTGATTCGGCATGATGACGCTTACAGTTTTGAAATAATTTCGAAAATTGTGGATACAATCATAC
CAATTTTGGTTGATGCAAAACAAGTGACAACCATATCTGATGTTTTGAGAGTATTTATTGACGCTTTGTTGGACGTACCT
GAGCACAGAAGGATACCACTGTACACAAAGCTTCTCACCAACGTCAACGTGAATGAGAACTTGTATTTGTTCTTGTTATT
TGTGATGGAAGCAGATGTTCTCCAAGCGTCTAGAGAGAAAACTAAAATTGAAAAGGGAGTAGCACCGCCACGATCCAAAA
TAGCTTTGCAATTATGCCAGGAATTTTCTCCTGTTACCACGTTGCAAGCTTGTGTACAGCTTGCTCAATACGTCAACGAT
CTTCCAGACGAAAAGGACGACCTTCCGACCAGCGGTTCAAGTTCTCTTCCACCTAGCACCAATTACACCAACAAACAATT
CCGCCACTACAAATATTTAATTATTACATTCTTGTCCAGCTTGTTGTCATCTCGGGAATTTATAGTCAAAATTGCCACAC
TTTCCAAATCCGAAAACAGTTCTATCGAGTCATTGTATAAGGAGTTAATCATCAAGGTGCTGTCATATATTCAAAGAATC
CAAAAAGTGTCCGATAGCTCCGCAGATAGTCCGCAGTCGCTCTACTGGAAAACCATTTTGCATCATAGCTATGAATTATT
AGATAGTATCAACGACCTGCTAAGTCCACGGATGTTTTTGTTAGTCATCAAAGGACTTTTGGTCCATAGTATGGTCAATG
TGAAGAAAAGAGCGCTCGAATTGTTGAACAACAAACTGCAAGGCAATCTACTAAGCTTCAGTGAGCAAGACAAAAAAGAG
CTTTGCATTCTAATTAAACCGATATCGCTTATCGTTGAGAACGAAAGCCAAGAGACTTTGATACAAACCGGTCTGCTATC
TTTGAAACTTATCGTTATAGTTTTGGCACCTGAAGAACCGGAAAAGTTTGTACCCGTTCTCGAATTTGTAGCAAGCATTT
TAAATTCCGGTAAAATGGAAGGAAACGTTTTGGCTTCAGTTGTTCTATGCTTGGCCGAAGTTTGTGCAGTTTTAAGGGCT
CATGGGTTAGCCGCAATCGCTTCATTTATGCCCGCGTTTCTTCACATTCTTAAGAAGCAAAAGTACCAGGAAACATATAG
CTTGTTACTGTTGAGCGTCGTAACAGCGGTTAATAAGTTTCTAGAGAGTTTTGCAGCATTTCTAAGTCCCTACCTGCCAA
AGCTTATCTGCGAAAGTTCAATTTTGTTAAGCAAGTGGGGCAGCTGCATCGAGGACTCAAAATGCCAACCCCTAATAATT
CGACTGAACGGAATTAAAAAGAAGCTCAGCACTACAATACCTGCGAGAATTTTGATTTCTGTTATAGATGAATGTTATAA
TACCTTACTAGCAAAACGATACTATAATGCTTTGGTGGCTTTGATGGATATAATGGAGGAACAACTAGTCAGTTTTCAAT
CGATGGACGTTGCTCAGAACATGTCCGAACTGACTGCCCTTTTCCTGAAAGCATTAGAATTTCGATCCAACCATAGTCCC
TCACTGGAAGTGGCAAATTTAATCGAAAACCAAGTGATCAAAACCTTGACGGTGTTCACTTTAAAGCTATCCGAAAGCAG
TTTCAGACCTTTCTACTTGAAGTTGTATGATTGGGCCCGGACAAATCATGAGCGCCTAATCACTTTCTACCACATTTCTG
AAAGAATCGGGCAGGCCCTAAAAGGATTATTTGTCTTGTTCGCCAGCAACATTTTCAGCAACATGTCCAATATTATACAC
AAAATCGACGAATATGCTTTTGACGACATCAAGAAAACCGTCCTGTTGTTGGAGTTTGTGTTGAAAACTTTGAAAACTAT
TTTCACTTACGATAACAAAAAGACTCTTAACAGGGATCGATTCCAGCTCATCATGCAACCCTTGGTCGACCTACTCGATA
AAGATATTGACGGCATTGACGCATTGGTAAAACGAAACGAGCAGCTACTAACTCCCACTATTGTCAGTTTTGCGCTGGCC
TTAGCCGATGATGTATTCTGGAAAGAAATGAACTATCAGGTTTTGTTGAAGATGCGGAATCCGAAACCCGAATTGAGGCT
TGTTGCTTTACATTGCCTAGCGGAAGTTGTCGCAAAGTTGAAGGAAGACTTTATGCCCCTGCTACCGGAAACTATCCCGT
TTTTAGCGGAATTGTTGGAAGACGAAGATGAAAGAGTGGAGAAAGCCTGTCAAAAAGCGATTCGCGAAATGGAAAAAATG
CTTGGTGAGCCTTTACAAAAGTACTTCTAA
PEP:
>DPO004906-PA
MILEIVKQLEFDGSFISDVLGLVLNKVDSEDLAKNCPTSWLQDIIKQLQLKYKVQFDEALKDIPETKISTDGNIALNICI
AGCFEPVTICKILRYVLRDKPDTCLNGIYVLIMLSNKDPTIRKLVFDIIEQFDTTHKWLLQQLSNQQERILADNAQVGLL
LTDILAHRTSSSNKAAVNLNQLMETICSNDTPMYVKWGILNCLSEVKKFDIVQTLCEHFVKLFENKTLDQCDLKILTNIV
RRLDSNVMAQMSQNSPIWHFVVFVLNQKRIVIIDEEKIYLPNCMLNQLSRDVSAVLPEDVLENLLDLVCEQVALCEEPEF
ISLSSKLFKHLDLNAKIISKILVQMTSINSSKGRNRRGLVTPTVDILDSVAWKKGVSLLEFIQSKKKIKNPQVLLPILFD
VLKKCLDFEEQAVVEYPKQLTLALVLLICCNVDENYVSESDFNIELVIQCIRASQNPQTHYHALLVLAHAAKIVPKDVLH
HVMAVFTFMGTTLIRHDDAYSFEIISKIVDTIIPILVDAKQVTTISDVLRVFIDALLDVPEHRRIPLYTKLLTNVNVNEN
LYLFLLFVMEADVLQASREKTKIEKGVAPPRSKIALQLCQEFSPVTTLQACVQLAQYVNDLPDEKDDLPTSGSSSLPPST
NYTNKQFRHYKYLIITFLSSLLSSREFIVKIATLSKSENSSIESLYKELIIKVLSYIQRIQKVSDSSADSPQSLYWKTIL
HHSYELLDSINDLLSPRMFLLVIKGLLVHSMVNVKKRALELLNNKLQGNLLSFSEQDKKELCILIKPISLIVENESQETL
IQTGLLSLKLIVIVLAPEEPEKFVPVLEFVASILNSGKMEGNVLASVVLCLAEVCAVLRAHGLAAIASFMPAFLHILKKQ
KYQETYSLLLLSVVTAVNKFLESFAAFLSPYLPKLICESSILLSKWGSCIEDSKCQPLIIRLNGIKKKLSTTIPARILIS
VIDECYNTLLAKRYYNALVALMDIMEEQLVSFQSMDVAQNMSELTALFLKALEFRSNHSPSLEVANLIENQVIKTLTVFT
LKLSESSFRPFYLKLYDWARTNHERLITFYHISERIGQALKGLFVLFASNIFSNMSNIIHKIDEYAFDDIKKTVLLLEFV
LKTLKTIFTYDNKKTLNRDRFQLIMQPLVDLLDKDIDGIDALVKRNEQLLTPTIVSFALALADDVFWKEMNYQVLLKMRN
PKPELRLVALHCLAEVVAKLKEDFMPLLPETIPFLAELLEDEDERVEKACQKAIREMEKMLGEPLQKYF
Swiss-ProtHEAT repeat-containing protein 1 (Fragment)
KEGG     K14550  UTP10, HEATR1; U3 small nucleolar RNA-associated protein 10     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
PfamPF08146  BP28CT; BP28CT (NUC211) domain     
SMARTSM01036     
ProSiteProfilesPS50077  HEAT_REPEAT; HEAT repeat profile.     
CoilsCoil

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