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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004351
PositionSeq_1102096:76377..82683[GBrowse]
sequence mRNA:
>DPO004351-RA
ATGGAGGTATTGCAGCAGAATGTGAAGAATATTAAAATTCCAACCCAGTTGGACAAAGTGTATAAAGATGAATGCGTTTA
TTCCTTCGATAATCCTGAAACCGATACTGGTTTATATGTGAGCTTAACTAGTTTCATTGGGCTTGGCAAAGATCATGTCG
AAAGGCATTTTCTTCGGACTCAAGAGGCCGTGTATTTACATTTAAGGCGAGAGCGTCATGAGGTCTCATCACCACCACAG
GGAGATGGCCCTGAGAAAAAAATTACTCGATTGGCAATTGGAGTGGAAGGGGGATTCGATCCAGAATCTGGAGCTAAAAA
ATTCGAATTTGAAGATTTTTATGAAATCATTGTTCTTCCTGGATTCGTTGCGATTGACTGGCCCAATGAAAACCTGCCAG
AAGTTGTGAAACTCTCAGTACAAGCTCTGCTTGATTTGCCTTCAGCAAGTAAATTGGCAGAATTGGAAGCGCTGAGTGGA
ACATGGGATGGTGAGTCCAGACAGGTATCCAAACATGCCCATAATCTTTTGCAGTTGGACAATGGGAAAAAAATCCCCCC
AACAGGCTGGAAATGTGAAAAATGTGATAAAACGGAAAATTTGTGGCTGAACCTGAGTGATGGCTCAGTCTTATGTGGCA
GGAAATTCTTTGATGGTTCTGGAGGAAATAACCATGCTGCCGAGCATTACAATGCATCGAAATGTCCTCTCGCGGTGAAA
TTAGGCACCATTACGAAAGATGGAAAAGCAGATGTGTTCAGTTACAGTGAAGACGATATGGTAGAAGACCCGTTATTAGC
CCAACATCTACAGCATTGGGGCATCAACATTTCCGATCTGGAGAAAACCGAGAAGTCAATGGTTGAACTGGAACTGGAAT
TAAATCAGAAGACCAACGAGTGGTCGATGTTATGTGAAAGTCATGGCTCATTGAAACCTATTTACGGCCCTGGTTTTACT
GGCATGCAAAACATGGGAAATTCCTGCTATCTTAATAGTTTGATGCAGGTTCTATTCCGGATTCCAGACTTCATCAAAAG
ATACTATGAAGGTAGCGATGGAATATTTCAGCAGCCAACCTCTGACCCTGCCGAAGACTTCAGCATTCAAATGGCAAAGT
TAGGCGTAGGTTTGCTGTCTGGAAAGTATTCAGTGCCTCCGCCAGCAGGATCTCCTGTAGATGCCGATCCACCAGGCATA
ACTCCCTTAATGTTTAAAACTCTCATTGGGAAAGGACACCCGGAATTTTCTACTAAAAAGCAACAGGATGTTCAAGAATT
CCTACTTCACATACTCACGCTGCTCGAACGCTATAATAAAGACAAAGTAAATCCTGGAGAATGTTTCAAATTCGAAGTGG
AAGAGCGATTCCAATGCGGTCAGAGCAAAAAAGTGAAATACCTAACCCGTAGCGAAGTGTGCCTGGGGCTGAATATTCCC
ATGGAGGCTGCAGTCAATAAAGAGGAGGTAGCAGCTTATGAAGCACGGAAACAGGAATTGGAAGTTCAGGGCAAGAAACC
TGACCCGGAATCCATTGTCAGACCGAAAATTAATTTCCATTCTTGCATTGAATCGTTTGTGCAATCGGAAGTTATTAACA
ACTTTTTCAGTTCCGCGGTCAATGGCAATGTAACAGCTCGAAAAACGACAAGATTGGCAACGTTTCCCGATTACCTGGCG
ATACAGTTAAAAAAATTCACACTAAAGGAAGACTGGGTGCCGATTAAACTAGATGTATTAATAGATATGCCCGATGTTAT
TGATATATCAACGTTGCGTGGAAGTGGTATTCAACCAGCGGAGGAACTTTTACCCGAACTGGAGGTGCCTCCACCAGCGC
CCAAATTTGACGAAGCAGTACTGGTACAGCTTCAAGAAATGGGTTTCCCGGCCGAATCATGCAAACGTGCATTATATCAA
ACTGGAAACTCTGGGATCGAAGCAGCAACCGCTTGGTTGATGGAACACATTACCGACTCTGACTTTAGCCATCCGTTTGT
TCTTCCCGGGACAGAGTCTTGTGCATCCGCTTTCATACCAGACCCTGAAGCGTTGCAAAATATCATTTTAATGGGTTTCA
CTGCCGAGCTGGCTGCTAAAGCTTTGAAAAACACCGACAACAACGTGCAAAGAGCCATGGATTGGATCTTTTCCCATGCA
GATGATATGGAGACGGATGAGAGCGTGGCGTCTGCTAATCCGAACTCTCAACCGAAGTTTAGGGATGGAAATAGTAAATA
CAAGTTGATAGCCTTCATTTCTCACATGGGCACCTCGGCCTCTATGGGTCACTATGTGGCTCATATACTAAAAGATGGCC
AATGGGTGATTTTCAACGACAGCAAAGTGGCTCTTTCGGAGAATCCCCCTAAAGATTTGGGCTATCTCTACGTCTATGAG
AGACTTTAAAAAGTCCGTAAGTCAAAATAGATTAATTGTACGTTGAAATTACAATATTGGTTTTTTTGCGTTGTAAAATG
CGGCCTTTATAAAATCAACTGCATTTTAAAGCAGTTGATATTATATGGAACTGGCTTTATGTGTTTACTGTTTAATAGCT
CCTGACTAGCGTGATAGTCATTAATTGAGTTCTTGTCATTTTCTAAATATACGTTTTTGATACGCAGTGTATTTGGTGGT
TCATGCATATGTTGCGTCACATACGCGTTTTTCTCCTACGAAATATATGAGTTTTGCCATTAGCAAAATGTTTGTGTGCA
AGAAGACA
PEP:
>DPO004351-PA
MEVLQQNVKNIKIPTQLDKVYKDECVYSFDNPETDTGLYVSLTSFIGLGKDHVERHFLRTQEAVYLHLRRERHEVSSPPQ
GDGPEKKITRLAIGVEGGFDPESGAKKFEFEDFYEIIVLPGFVAIDWPNENLPEVVKLSVQALLDLPSASKLAELEALSG
TWDGESRQVSKHAHNLLQLDNGKKIPPTGWKCEKCDKTENLWLNLSDGSVLCGRKFFDGSGGNNHAAEHYNASKCPLAVK
LGTITKDGKADVFSYSEDDMVEDPLLAQHLQHWGINISDLEKTEKSMVELELELNQKTNEWSMLCESHGSLKPIYGPGFT
GMQNMGNSCYLNSLMQVLFRIPDFIKRYYEGSDGIFQQPTSDPAEDFSIQMAKLGVGLLSGKYSVPPPAGSPVDADPPGI
TPLMFKTLIGKGHPEFSTKKQQDVQEFLLHILTLLERYNKDKVNPGECFKFEVEERFQCGQSKKVKYLTRSEVCLGLNIP
MEAAVNKEEVAAYEARKQELEVQGKKPDPESIVRPKINFHSCIESFVQSEVINNFFSSAVNGNVTARKTTRLATFPDYLA
IQLKKFTLKEDWVPIKLDVLIDMPDVIDISTLRGSGIQPAEELLPELEVPPPAPKFDEAVLVQLQEMGFPAESCKRALYQ
TGNSGIEAATAWLMEHITDSDFSHPFVLPGTESCASAFIPDPEALQNIILMGFTAELAAKALKNTDNNVQRAMDWIFSHA
DDMETDESVASANPNSQPKFRDGNSKYKLIAFISHMGTSASMGHYVAHILKDGQWVIFNDSKVALSENPPKDLGYLYVYE
RL
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 5
KEGG     K11836     
SUPERFAMILYSSF57850  RING/U-box superfamily     
Gene3DG3DSA:3.30.40.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
SMARTSM00290     
ProSiteProfilesPS50271  ZF_UBP; Zinc finger UBP-type profile.     
CoilsCoil
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     
PIRSFPIRSF016308     

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