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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004134
PositionSeq_1102838:109819..118432[GBrowse]
sequence mRNA:
>DPO004134-RA
GATTACTATTATTGTTGAAGATGGCGGATTTATTGGCCGTGCCGTTAAAACGGCCCAGTGATGTTGATGTGATTAATCCA
TTGAAAAACCTCATACAATCGCGGTACAGCACAGCAGACAATCCGGAAAACTGCACGGAAGCGGTGAACGAGTTTTCCAA
GTTGCGAAACAATGCCATTTGGAAGGCTTTCGAGAAGTACGAAAGCTCTTTGGAGATTATTTATGGATATTACGATCAAC
TAGTGGCGTTGGAAGGTAAAATTCCATCTCAAGAACTGCAAGTGCCGTTCAAATGGAAGGATGCTTTTGACCGTGGCAAC
ATTTTCGGCCACAAAGCCAGCCTGACCGTTGCCTCGCTCAGCTATGAAAAAGTATGTGTGCTATTCAATATAGCCGCCCT
GCAGAGCTCGGTAGCTGCCGAACAGAGCGTGGAGAATGATGACGGTCTTAAACTGGCTGCTAAGTTGCTACAGCAAGCTG
CAGGGATATTCAGCTACTTGAAATCGACCGTGATGCTGTCGATTCAACAGGATCCCACTCCAGATTTGAATCCTGACACC
TTAGGAGCGCTGTCGCAGCTGATGCTGGCTCAAGCACAGGAGATGTTTGTCCTTAAAGCTATACACGATAACATGAAGAG
CTCAATTGTGGCGAAACTGGCTGCGCAAGCCGACGATCTGTACGCCGAGTGTTTGAAGACATTCCAAAGAGAAAACCTGA
GGTCCATGTGGGATAAGGAGTGGATTCCGATGATTGGTGGCAAACAGGCGGCATTTTCAGCAGTAGCTGAATTCCAGCAG
AGCCTGGTGGCCCGAGAGCGGAAATCAGTTGGTGAAGAAATCACCAGGTTGCGGACAGCAGTAGAGAAGTTTACGGCGGC
CCAGTCGCGGTCTGGAAAGAGCGTGTTCAGCGACATGCTGAATAAGGCCCAGCGCAATTTGGCTGAAGTGGAAAAGGACA
ACGATTTTATCTATCATGAAAGGGTGCCAGACTACCGGTCTCTAGAAGCGATTGGCAAAGCGCCGCTGGCCAAATCTTTA
CCGTTGGCGGAGAAAATGTCGCAAAATTTTACAGATCTTTTCTCCACTCTGGTGCCAGTTGCCGTCCACCAAGCGTTGGC
TTCATATGATTTGCGCAAAACCGAGATTGTCAACACGGAAATTTCCAAGCTGCGCGAATCCACGCAGGAACTCAACGGAA
TCTTGGCGAGTTTGAACCTGCCGGCAGCGATCGAAGTGACCGATTCCAGCACTGGGCTGCCGCCGTCCATTCTGGAGAAG
GCTCAAACGGTGTCTGGACTAGGGGGCATCGACACGCTCAAAAGAATGATCGAGGAATTGCCCGAGTCGCTGAAGCGAAA
CCAGGACATAATCGATGAAACTGACCGGATGTTGAATGAGGAGAAAGCGGCGGATGACGCTTTAAGACAACAGTTTAAGG
ACCGATGGACTAGAACACCCTCAGAAAAACTGACTGAAATGTTCAGGTCGAATTCGGGCAAATACAGGCAGATAATTAAC
AATGCTGTGGAGGCAGATAAACTGGTGCAGAACAAATTCAACACCCACAAGCCAATGATCGAGCTGCTGAGCAAACCTCT
GAATGATCTGGAGACATCGTTGCCCAGTGGAAATGGCGGAGACGTTCAAAATTCGTCTGCGGTCGGCACTCTGAGATCCC
TGATGGAGGAGGTGGAAACCATCAAGGCAGAGCGCGACAGCATCGAGTCCGAACTGAAAAGTGCCACCACCGACATGAAG
GACAAATTCCTGCTGGCGCTTGCCAAAGATGGCCAAATCAACGAGCCGCCTCTATCTTATCAGGCCCTGGGGCAAGCGTA
CGGCTCTTTGCAGAAGCAGGTAGCTGAAAGCCTGGCAAAACAGAAGGGGCTAGTTGACCGGATCAGGGCAGCACATCAGC
AGTTTGTCGCTGAGCGGGGATCTACAGTGGGTGGGCGCGAAGCTATGATGTGTCAGCTGGCTGCAGCTCACGACGTGTTC
CGCGATTTGCTGAACAACCTCAAAGAAGGCACAAAGTTCTACAATGACTTAACGCAGTTGCTGGTGACTTTCCAAAATAA
AGTCAACGACTTTTGCTTCGCGAGGAAAACCGAGAAGGAGGAGCTCATGAAGGATTTGACTCAAGAGAGCAGCCGAACTG
CTCCGGCCGTTCCTCCGTCCACGCCCAGTTATTATTCAGATCCGAAACCAGACAATTCCGCGCCTGCAGCATCTGGAGGC
GCTGCTCCTACGCCCGCAGGACCTGGACAAGTTCCCTCCAACTTGCCCTACCCTGTATACGTGCAGGGCATGCCTTTGCC
CTACGGAACGGCCGCTAACGCTCCTTACCCGGTATACGTGCCTCCTCCAATGCCGCAGAGCTACAATCCGTATGGAACAT
GGCCAGGAAACTACCAGAACTATCCTCCTGGCACTTACCCTCCAGGAACTTACCCACCAAATTCGCAGCAGCCAGGTTAC
CGGCCACCCTGGTAGTAGATTTCTCGGTGTTTATGGTAAGGAAATTTGAATTGTTTAATTGTTTTTCCAAACGAAATTTA
TTTTGCGGTTACTGTGCTGTCATGTTATAATTAATTAGTTAATAATCTGTAAATTTCAGCAGATTAGCAACCGATTGCCT
TTGTTAATCTGTGTCTTTGTATTTTTGTAGTGACCATATATGCATTTTTATCCGACTGTAAGTTGTTATCAATTAATAAA
GCTCTATTATACATAAATGATTGAAACTCACCGACTACA
PEP:
>DPO004134-PA
MADLLAVPLKRPSDVDVINPLKNLIQSRYSTADNPENCTEAVNEFSKLRNNAIWKAFEKYESSLEIIYGYYDQLVALEGK
IPSQELQVPFKWKDAFDRGNIFGHKASLTVASLSYEKVCVLFNIAALQSSVAAEQSVENDDGLKLAAKLLQQAAGIFSYL
KSTVMLSIQQDPTPDLNPDTLGALSQLMLAQAQEMFVLKAIHDNMKSSIVAKLAAQADDLYAECLKTFQRENLRSMWDKE
WIPMIGGKQAAFSAVAEFQQSLVARERKSVGEEITRLRTAVEKFTAAQSRSGKSVFSDMLNKAQRNLAEVEKDNDFIYHE
RVPDYRSLEAIGKAPLAKSLPLAEKMSQNFTDLFSTLVPVAVHQALASYDLRKTEIVNTEISKLRESTQELNGILASLNL
PAAIEVTDSSTGLPPSILEKAQTVSGLGGIDTLKRMIEELPESLKRNQDIIDETDRMLNEEKAADDALRQQFKDRWTRTP
SEKLTEMFRSNSGKYRQIINNAVEADKLVQNKFNTHKPMIELLSKPLNDLETSLPSGNGGDVQNSSAVGTLRSLMEEVET
IKAERDSIESELKSATTDMKDKFLLALAKDGQINEPPLSYQALGQAYGSLQKQVAESLAKQKGLVDRIRAAHQQFVAERG
STVGGREAMMCQLAAAHDVFRDLLNNLKEGTKFYNDLTQLLVTFQNKVNDFCFARKTEKEELMKDLTQESSRTAPAVPPS
TPSYYSDPKPDNSAPAASGGAAPTPAGPGQVPSNLPYPVYVQGMPLPYGTAANAPYPVYVPPPMPQSYNPYGTWPGNYQN
YPPGTYPPGTYPPNSQQPGYRPPW
Swiss-ProtProgrammed cell death 6-interacting protein
KEGG     K12200  PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein     
Gene3DG3DSA:1.20.140.50     
PfamPF03097  BRO1; BRO1-like domain     
SMARTSM01041     
ProSiteProfilesPS51180  BRO1; BRO1 domain profile.     
CoilsCoil

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