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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO004040
PositionSeq_1103005:213145..219384[GBrowse]
sequence mRNA:
>DPO004040-RA
GGTTAGAGTTCCTGCAAAGCAAACCAAAATTGTTTATTTTCGTCGGCTACTATTTTGCAGGTTGAATTAGCGCTCAGCAG
CCTTTAAATTTTCCGCAATGTCCATCGAAATTGAATCAGCAGACGTTATTCGACTGATCCAGCAGTATTTGAAGGAGTCC
AACCTATACAGGACCTTGCATACCCTCCAGGAAGAAACCGGCGTTACCCTCAACACAGTGGACAGTGTAGATGGGTTTTG
TGCAGATATCAATAATGGCCATTGGGACACTATTGTTCTGGAGCTGATCGAGTTGAGAGAATTGGGGGCCGCTAGGTCCC
TGCTAAGGCAAACTGACCCGATGATTATGCTGAAGCAAAACGAGCCCGAGCGATATATTCACTTAGAAAACCTTCTGGCT
AGATCCTACTTTGACCCAAGGGAGGCGTATCCAGATGGGAGTAGCAAGGAGAAGAGACGAGCAGCTATAGCACACGCTTT
ATCTGGGGAAGTTTCAGTTGTTCCGTCGTCGCGTTTGTTGGCCCTTCTTGGGCAGGCCCTCAAGTGGCAGCAGCATCAAG
GTTTGCTCCCTCCTGGCACCACTATAGATTTGTTTAGGGGCAAAGCTGCGGTCCGAGAGCAGGAAGACGAAACATTCCCA
ACGCAAATGGCGAAACAGATCAAATTCGGCCAAAAGTCCCATGTGGAATGTGCCAGATTTTCGCCAGATGGTCAGTATTT
GGTCACTGGCAGTGTGGATGGCATTATAGAAGTGTGGAACTTCACAACGGGGAAAATTCGAAAAGATCTTAAGTATCAAG
CACAGGAAAGCTTCATGATGATGGAGCACGCAGTGCTCTGCATGGCCTTCTCCAGAGACAGCGAAATGTTGGTGAGCGGC
TCGCAAGCAGGCCGGATAAATGTTTGGAGGATAAGCACCGGGCAGTGTTTGAGGAAAATCGAAAAAGCCCACACGAAAGG
GATCACTTGCCTCCAGTTTTCCAGGGACAACAGCCAGGTTTTGAGCGCGTCGTTTGATCATTCCATCAGGATCCACGGCT
TGAAATCAGGGAAAACCCTGAAGGAGTTCAGAGGCCACAGCTCGTTTGTTAATGAAGTCATTTTCACCCAGGATGGACAC
AACATTTTGAGTGCTTCTTCAGACGGAACAGTTAAAGTCTGGAGCATCAAGACAACCGAGTGTGTCAACACCTTCAAGTC
ATTGGGATCGGCCGATTGCACAGTGAACAATATACATAACTTTTATAAGAATCCCGAGCATTTCGTGGTTTGCAACCGGA
GCAATACTGTGGTTATTGTGAACCTACAAGGGCAGATTGTGCGCTCGTTTGCCAGCGGTAAAAGAGAGGGTGGCAACTTT
GTTTGTTCTTCAGTGTCCCCGCGAGGTGACTGGATTTATTGCGTAGGCGAAGACATGGTGCTCTATTGCTTCTCCACCGT
ATCCGGAAAACTCGAAAGAACCCTGAACATTCACGAAAAAGATGTCATCGGTATAGCCCATCATCCGCACCAAAATCTCA
TATGCTCATACACGATGAAGCGCTTAGTGCTGCTGATAGCTTCCTTAGCTGCCAGCTACGGCCTTCCGCAGTCGAACTAT
GCGGACCAGGCCAACAATGTAGCTTACATAGGCGAAGGCCTGCCCCCTGAGGCCGTCTTGGGCGGAAAAATCACTCAACT
CGACGATCTGAGCCCGGAAATCAATTTAAACAAGACCAAAGCTGATCTGAATTGCGCGGCTGGATCCATGCAGATTGATC
TCAAATTCAAAGAGCCCTTCTATGGAATCGTTTACGCAGACTTCGATAGGAACTCCGCTTGCCAAGTGGCGGGCAAAGGG
GCCCTTAAGTACTACCTGGAGCTGCCTCTTAAAGGCTGCGGGACCAAGCAGGATCCGCAACGCGTGTTCACCAACAATAT
AGTGGTGCGATCTCATCCGGGCTTGGAAATGGATGGAGACGAAATTGTAACGATAGTTTGCCGATATCCGCCGCCGATAG
TCCAAGAACCCGAACCATTCATCAGTCCTGAAGGAATAGTGGCTCCCAGCAGTTACACCCCTCTATCGCCACTGCCGGTT
TTGCTGATAATATGCGGAATCCTGTTCCTTTCGCTGTTCCTGCTTGGTTTGGCTGCGTCCTACCTCTGCCTCAGACGAAG
GCCGCTGACTATAATCCGCACTCACACTCCTTCAGAGAGCGACATTGAAAAACTCTCCGAGAGCTCGTTGGCTTTGGCTC
CGATCCATGAATCGTCCGGTTCCGAATACCCGGGCGAATCGCCCTCGGAAGTCGAAGAGCACGCCGTTGTGCACGAAAAC
GCCAGCTTTTCGAGCGAGGGATACGACTACGCGCAAGAACAGCAGCTTGATCAAGTCACAGCGAGACCCAGCACCATTCC
ACGCCTGCCGATTGCTGTTAAGGAGGATTCTCCCAAACGTGCAGGTGAAGGTCCGGAGGCCGCCACCTCCATCTCCGCCG
CTGTCCCTAACAGACAGCAAGAGCTCCAGAAGCGAGAGCTTCGCTCCCCCGCCTCCTATCCAGGAGGAGGAGGTTCTAGA
GCTGGAGGAACCAGTGCCTGCAATGTCCGCGCCTATAGTAATGCACCAACCGGAGATCACCCAGCACTTTGTCGACGACG
TTTACTTGAGAACCATTCAAGGTACCCATCAGGAACTTTTCCCAACACCCTTGTAGAAAAGAAGATAATTGAAGACATAG
ACCGGCAGAAGCGACAAGTCACTCAGTACCACACCGAGCCGAAGCTGCTTCCGCCTCAAGTGTGGGACGTGACCATCAAA
AACTTCCCCATGCAGGCGCATCCGCCTCAATGGGAAGATTTCTCCGACATTTCTTCGGCCTCCGGACTGTCCCTGACACC
GAAAATGCCCCGAGTGATGAGCCTGCCGCCTCAGCCTCAAATCGACGATGACAAAATCCCTCTGAGTTCCCCCGAGCTGG
TGGGCAGCATCGGGCAACCGCCGCCTCCTGGTCACAGAGTGACCATCCAGACTCCTCCTGATAGAAGAGTGATTGAAACC
GATCTCAGCACCAGGAGGATGGAAACGGTGCGAGAAACCACTGAACGGGAGGAATGGGAGCGGGTTTTCAACATCCCCAA
GGACAATCCTGAGGTGCCCAACTGGAGCGTCTTGATCAGGGTCCTGCAGCCGATTGAACCTGAACCGAGCCCGGTGATTG
ATTCGGCTGAAACCTACAACTCCCAGCTCACTCTGAGCGACAGGATGAAGTGGCGGCAGATCATCACAACCGAGTCAACA
TTGAAAACTCTTCTCACAGAAGCGATAGTGCGCGAAGACTTCGAGAGAATCAGCCGCGATGTGCGGTTTGAGCACATATA
CGAGCCGCCTAAGTGGAACGTGATCATCCGCATCCTAACTCCTGAAGACATCGGCCCGGATCAGAAATACGTTTATCCGC
GCCGCGGAAGTCTGCCGACGCTGCACGAATACGACTCAGACGATGGCAGCAGCATCAGAGAACCCCAGCTGTATCCTTCC
ACAGTCTACAGAAGGTCGATAAACAAGAGCGAAGCCGACCTGCGCTCCATGTCGGAAATGACTGTGGACTTCGGAAGATA
TCCGGAAAGCAGTGGGCGAAGCCAGACAGCCCCCGATTCCCCCTTTTTGGCCCTGCACAAGTCCTTAAGTCAGCCCAGCT
TGGGCCGATCCATCAGCGAATTCACCGATCGAGACAGATGGATGGTGCCGCAAACGCCCAGCGAATGGACGAGCACGCCG
GAGCAAACGCCGCGGCTTCAAAGGAGCCCCAAAATGAAGGCGTTCCATTTGCCAAGAGTGCGGCTGGACAGCGGCTCGTC
CACAAGGAGCGGACAGGCTGAGAGCTCGTGGCAAGCAATGGAATCCAGCAGCATGGCTCAAACACCTGGAGGGACTACGA
CAAAGGAAGTGTCCAGGGAAGTTCGGGGGGCGACTAGGGCGAAATGGGGCAAGCCTGCGCGTCCAGGCCCGAAGGGCTGG
TTTCCCGACAGTGGGAGCGAAAGCGGCTCAAAATGATCAAGCTGTTAACCACCGTAACGTCCACTAATTGCGCCCAAGAT
AACCAAGCCACTAACTGTGATAACATAGATGATTAAGAATGAAGTGCCGCATCAAACCAATCTCATATATTTGCCTGCTT
GCTTAAAAAACTACAATATGGAATTAAATAGCGGTCATACACACACAAA
PEP:
>DPO004040-PA
MSIEIESADVIRLIQQYLKESNLYRTLHTLQEETGVTLNTVDSVDGFCADINNGHWDTIVLELIELRELGAARSLLRQTD
PMIMLKQNEPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAHALSGEVSVVPSSRLLALLGQALKWQQHQGLLPPG
TTIDLFRGKAAVREQEDETFPTQMAKQIKFGQKSHVECARFSPDGQYLVTGSVDGIIEVWNFTTGKIRKDLKYQAQESFM
MMEHAVLCMAFSRDSEMLVSGSQAGRINVWRISTGQCLRKIEKAHTKGITCLQFSRDNSQVLSASFDHSIRIHGLKSGKT
LKEFRGHSSFVNEVIFTQDGHNILSASSDGTVKVWSIKTTECVNTFKSLGSADCTVNNIHNFYKNPEHFVVCNRSNTVVI
VNLQGQIVRSFASGKREGGNFVCSSVSPRGDWIYCVGEDMVLYCFSTVSGKLERTLNIHEKDVIGIAHHPHQNLICSYTM
KRLVLLIASLAASYGLPQSNYADQANNVAYIGEGLPPEAVLGGKITQLDDLSPEINLNKTKADLNCAAGSMQIDLKFKEP
FYGIVYADFDRNSACQVAGKGALKYYLELPLKGCGTKQDPQRVFTNNIVVRSHPGLEMDGDEIVTIVCRYPPPIVQEPEP
FISPEGIVAPSSYTPLSPLPVLLIICGILFLSLFLLGLAASYLCLRRRPLTIIRTHTPSESDIEKLSESSLALAPIHESS
GSEYPGESPSEVEEHAVVHENASFSSEGYDYAQEQQLDQVTARPSTIPRLPIAVKEDSPKRAGEGPEAATSISAAVPNRQ
QELQKRELRSPASYPGGGGSRAGGTSACNVRAYSNAPTGDHPALCRRRLLENHSRYPSGTFPNTLVEKKIIEDIDRQKRQ
VTQYHTEPKLLPPQVWDVTIKNFPMQAHPPQWEDFSDISSASGLSLTPKMPRVMSLPPQPQIDDDKIPLSSPELVGSIGQ
PPPPGHRVTIQTPPDRRVIETDLSTRRMETVRETTEREEWERVFNIPKDNPEVPNWSVLIRVLQPIEPEPSPVIDSAETY
NSQLTLSDRMKWRQIITTESTLKTLLTEAIVREDFERISRDVRFEHIYEPPKWNVIIRILTPEDIGPDQKYVYPRRGSLP
TLHEYDSDDGSSIREPQLYPSTVYRRSINKSEADLRSMSEMTVDFGRYPESSGRSQTAPDSPFLALHKSLSQPSLGRSIS
EFTDRDRWMVPQTPSEWTSTPEQTPRLQRSPKMKAFHLPRVRLDSGSSTRSGQAESSWQAMESSSMAQTPGGTTTKEVSR
EVRGATRAKWGKPARPGPKGWFPDSGSESGSK
Swiss-ProtWD40 repeat-containing protein SMU1
KEGG     K13111     
SUPERFAMILYSSF50978  WD40 repeat-like superfamily     
Gene3DG3DSA:2.130.10.10     
PfamPF00100  Zona_pellucida; Zona pellucida-like domain     
SMARTSM00320     
ProSiteProfilesPS50896  LISH; LIS1 homology (LisH) motif profile.     
ProSitePatternsPS00678  WD_REPEATS_1; Trp-Asp (WD) repeats signature.     

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