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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO003844
PositionSeq_1102060:181529..188618[GBrowse]
sequence mRNA:
>DPO003844-RA
ACTAACGCCATTTCGAAAAAGTACATAACGATCGCTTGCTGTGCATGGGCCAGCCACTTTATGTCTTTGTGGGGCGGGTT
TTTCTTCGACGATTCGGAAGCTATCGTCCACAACCAAGACATTCAGTCTCGTAGACCGTGGCAGTCTGCTTTTGCTAACG
ACTTTTGGGGCACCAGCATCACCCATCCCAGCAGCCACAAGAGCTACCGGCCACTAACCGTCTTATCTTACCGGCTGAAC
GTGTTTTTTTCGGGTGGACGATTGGACGCGTTCCAATTCCACACAGTCAACGTGGTACTGCACGGCATTCTCTCCCTAAT
GGCCCTTCCACTCTTCGAGTGTTTGCTAAAGCGGAAAAAACCCAGAAAAACGCTCCATATTTTGGACGATCCCGCCTTCA
CTGGAGCCCTACTCTTTGCCAGTCATCCTGTACACACTGAGGCTGTTGCAAGCCTAGTGGGTCGAGCCGACCTTTTGGCA
GCCATTCTGTTCTTTGGCCTGATTATACTCTACAAGAACGTATCCGGACTTCTCGGTTGGTTTGTGTCTGTGTCGCTGAT
CTCAGGCACGGCCGTTCTGTGCAAAGAAACCGCCATCACTGTGCTGGGCGTATGCATCATCTACGAGGTGTATCTGCGGA
AAAAACCGTCCAAGTTCTGGAGCGAAACGTTCGAAAAGACATTTCTCATGCGAGTTGGCCTGCTGGTATTGATCGGTTTC
ATCATCATGATCCTGCGGCTGAAAGTGATGAACTTTGAAGGGCCCACTTTCAGCCCCACGGATAATCCCGCATCGTTCCA
CGAAAGGTTGACCGTCCGGGTTTTGTCCTACAACTACATTTACTGCCTAAATGCGCTGCTGTTGGTGTGGCCCCAGTGGC
TGTGCTTCGATTGGTCGATGGGATGCGTCCCACTGATCCAGCAACGTTCGGATCTGCGTATTTTTGCAGTTTTAGCTTTT
TGGCTCATTGTAATTGCAGTCAGTTACCGATTGGTTAAAGACCTGATTACTAAAGATAAAGTGGATGTGTACGTGATGGC
CTTAAGCTTGATGTTGATTCCGTTCCTGCCATCCAGCAACCTTCTGCTTCGCGTGGGTTTTGTAATAGCCGAGCGAACTT
TACTGGTGCCCAGCACTGGATATTGCCTATTGGTGGCTGTTGGTCTCGAGAAGCTAAAAAGTCGATTTGGCTCCGTAAAA
AATCTTTTCACTGCCATGTACATTCTGCTGCTGGTCACTTTTGTCGCGCGAAGCATTCAGAGAAACTACGAATGGATCAA
CGAGGTGCGTCTATTCAAATCGGCGTTGGAAGTGTGCCCGTTGAATGCGAAAGTGCATTACAATATCGGAAAGGTTTTGT
CCAATCCGACACGCGGATCGCTTCGTGATGCCGAAAGGAGTTATAGACACGCATTGGAGCTCTATCCGAGATATGAGCAA
GCCATGAACAATTTGGCCAATATCTTGAGGGAAAAAGGCCAGTTGGAAGAGGCCGAGTATTGGCTGCAGTTGGCTGTGGC
GGTGAGACCAAATTTTGCAGCCGGTTGGATGAATCTCGCTATTGTTCTGGGCAGTCAGGAAGAGCGATGGGGGGAAGCGG
TTAGGGCCTACAAAAACGCTCTTGCGCATAGAAAAGAATACCCGGATGCGCAGTACAACCTGGGAAACCTCTACCTCGAC
ATGGGAGATCACCTCGCAGCTTTAGACTGTTGGAAAAAAGCGGCCGCGCTTCGTCCGACGCATGCGGCCGCTTGGGGCAA
CAGCATGGCGTTGCTGGACTCAAAAGGAATGGCTTCTGCAGCTGTTGAACTGGGCCAAGAAGCTCTTAAACATGTGCCTA
AATCTGCAGCCGTGCACTTTGCGCTTGGCAACGTTATGGGAAAACTTAACAGGCTTTTGGAAGCGGAGCGTCATTTTCGA
GACGCTATTAAATATGATAGTAAGAACAGCTTGTATTACTCGAATTTAGTCGTCTTTCCCACAATGGTGAGCACGCAAGT
GAACGTAAATTCCAAAGGATTGGGCCATAAGGCCATCCTAATCGATGCCAAAGGCCACTTATTGGGCCGATTGGCCACCG
TTGTGGCTAAGCTGCTCTTAAATGGAGATAAAGTTGTTGTAGTGCGGTGTGAGCAGCTGAACATCTCCGGTAACTTCTTC
AGAAACAAGTTGAAATTTATGTCCTTCCTGCGCAAAAGATGCAACGTAAATCCAGCTCGCGGGCCTTTCCACTTCAGGGC
GCCTTCCAGAATCTTCTGGAGAACTGTAAGAGGAATGTTGCCACACAAAACCGTAAGGGGAAAAGATGCCTTGCGCAAGC
TAAAATCATACGAAGGTATTCCAGAACCCTACAGTGCTAAGAAACGTCTGGTGGTGCCTGGAGCTCTGAGGGTGATCTGC
TTGAAACCCGGGCGCAAGTTCTGTCATGTAGGCCGTTTGTCCAATGAGGTGGGATGGAAGTACCAGAGAGTCGTCCGTGC
TGTTGAAACCAAACGGAAGGTTAATGAAGTTCTGAGCATCAAGAAGCGGGACAAAGTGAGGAAATTGACTGCCCAGGCTT
CAGAGAAAGTGGCTAAACAGGTGAAGCCGTTCACGGCAATCATTAACTCGTACGGTTACAAGTGAGAAGTTACTGTGAAC
TTCACGGGTTTGAATGCCTAATAAATTTTTATTAATTTAC
PEP:
>DPO003844-PA
MSLWGGFFFDDSEAIVHNQDIQSRRPWQSAFANDFWGTSITHPSSHKSYRPLTVLSYRLNVFFSGGRLDAFQFHTVNVVL
HGILSLMALPLFECLLKRKKPRKTLHILDDPAFTGALLFASHPVHTEAVASLVGRADLLAAILFFGLIILYKNVSGLLGW
FVSVSLISGTAVLCKETAITVLGVCIIYEVYLRKKPSKFWSETFEKTFLMRVGLLVLIGFIIMILRLKVMNFEGPTFSPT
DNPASFHERLTVRVLSYNYIYCLNALLLVWPQWLCFDWSMGCVPLIQQRSDLRIFAVLAFWLIVIAVSYRLVKDLITKDK
VDVYVMALSLMLIPFLPSSNLLLRVGFVIAERTLLVPSTGYCLLVAVGLEKLKSRFGSVKNLFTAMYILLLVTFVARSIQ
RNYEWINEVRLFKSALEVCPLNAKVHYNIGKVLSNPTRGSLRDAERSYRHALELYPRYEQAMNNLANILREKGQLEEAEY
WLQLAVAVRPNFAAGWMNLAIVLGSQEERWGEAVRAYKNALAHRKEYPDAQYNLGNLYLDMGDHLAALDCWKKAAALRPT
HAAAWGNSMALLDSKGMASAAVELGQEALKHVPKSAAVHFALGNVMGKLNRLLEAERHFRDAIKYDSKNSLYYSNLVVFP
TMVSTQVNVNSKGLGHKAILIDAKGHLLGRLATVVAKLLLNGDKVVVVRCEQLNISGNFFRNKLKFMSFLRKRCNVNPAR
GPFHFRAPSRIFWRTVRGMLPHKTVRGKDALRKLKSYEGIPEPYSAKKRLVVPGALRVICLKPGRKFCHVGRLSNEVGWK
YQRVVRAVETKRKVNEVLSIKKRDKVRKLTAQASEKVAKQVKPFTAIINSYGYK
Swiss-ProtTransmembrane and TPR repeat-containing protein 4
SUPERFAMILYSSF52161  Ribosomal protein L13 superfamily     
Gene3DG3DSA:1.25.40.10     
PfamPF07719  TPR_2; Tetratricopeptide repeat     
SMARTSM00028     
ProSiteProfilesPS50005  TPR; TPR repeat profile.     
CoilsCoil
TIGRFAMTIGR01077     
HamapMF_01366     

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