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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO003459
PositionSeq_1102721:1201858..1219553[GBrowse]
sequence mRNA: 
>DPO003459-RA
ATGTTTTCGGTCGAGGTGTTTAAGATAATTCGTTTTGCGTTTGTGGTTTTTGCTGTGATTTGTTATTTCGAGCCCTTGAC
TTATTGTCAGGCTATACCAATGACTTCGATAGAGTCCCGATCAGCAGTTCAGTTTATACCTAATGGAAGCGACCTTTCCA
CCAATCTACAACCTGCAGTGGAAGAAACAAAGAGCAACGATCCAGTGAACGTGACATCAACTGAACTTTCGTCTACACAA
GCACCAACAGCAACCACCACGCAACAGACGACTGAAACAACAACCCATTCCAGACCAGTGGACATAAGCTGTCTGCCCAT
GAATTTAATGGGAGAAATGGATCATGTAACTCAGGAAGAATTCACATCGAAACTCACAGACTCATGCCGATATGATCGAC
TTATCAAACCGACAGTTCCAAAGTTGCTCGAAGTTAACATGCAAATCGATTTGACACATATAGAATCTTCAGATGCACAG
CAAATGAAATCCTACATTCTGGTACAATTAGGGTATAAAGATGTGAGACTGAAATACGACACGTACTCTCCAAAAAGAGG
CTGCATCCAAGGGGAGGAACCTTTAAGGAACAAAATTTGGGTTCCACATATTACAGTGCGAAACGAGAGGGAGTCTTCTA
TGATGGGTCTAGATGGTAAAGACATCTTCGTGCAAGTAATGCCAGACGGCGAAGTAAACTATTCCTACCGAATGACGCTT
ACATTCTATTGCTGGATGGATTTAAAAAAGTTCCCGTTCGACTATCAAATATGCAGGATTACCTGGATAAGTTGGTCATA
TGATACAACTAACCTCTTGCTAAAATGGTCCAATGAAGATCCAGTGCAAATTGCCAAAAATCTGCATCTTACTGAGTTTG
TTCTGGATTCGTTTTGGACCGAAGCCAGCACAGTTCCAGCGTCGTTTTCTACCGGCGGTTTAGTTGGAAACTACAGCGCT
TTAACGTTCAAGTTTAAATTGCGACGCGAGATCGGTTACTACATTATGGATTACTTTCTACCATCCATGTTCCTTGTAGC
AACTTCATGGGTTACGTTCTGGTTGCAAGCAGATGCAAGCGCTCCAAGAGCTGTTTTGGGAACATCGACAATGTTGTCCT
TCATTACTCTGAACGGCGGACTTACCAAAAATCTACCGAAAGTAAGCTACATTAAAGCCAGTGAAATTTGGTTTTTGGGT
TGTTCCACATTTATATTCTGTGCAATGGCTGAGTTTGCGTTCGTCAATGTAATATGGAGAAGAAGAAAGCAAGTAGAAGT
GAAAAAAGCAAGCAGCAAACATATCCTGATAGGAGCAGTGACTCCGAGTTTAGCAAGAAGGCACGTTAGACGCATAGAGT
CCTTCAATAGCATTTATAAAACACGCTCCTGTACAAGCTTGAATGAAAACGACGAGAATGAGAAAGAAAACAGCCAAAAT
AATTATCTAACTGTACATAGCTTTCCAACATCAATTCAATCAATTCCAACGATCAAAATACCGAACAGCAGTCAAGATGA
GCTCATAAACATTGAGGACCATGTCACGACGATTCCAGTTCCGGGGAAACCTGGAGATAAAAGAAATTCGCCCCCACATC
AGGCTTGGACTACAATGACACCACACGAAGTAGCCAATTGGATAGACAAAAAGTCCCGAATAGCATTCCCGGTGGCTTTT
ATTATATTTAACTTGTTTTATTGGTCATTTGTGTATGCGCTTTAGTTCAGTTGTAGAAACGTTGTGATCTGAAACATTCC
AATAACGAATAATTGGTGTTAAATAATTTGTCTCATACATATCATCACAATTTATTTAAGATTAAACATGTTCGATTCAG
TAATATTTGAATCTCTCATAAGAAACATTTATGAACTGTAAATATTGCCTTCTAGTGTTAATTGACTTGTATTTATATTG
TTTTATACTTTCTGTGTTATTAAAGTAGAAATGATAATCCTG
PEP: 
>DPO003459-PA
MFSVEVFKIIRFAFVVFAVICYFEPLTYCQAIPMTSIESRSAVQFIPNGSDLSTNLQPAVEETKSNDPVNVTSTELSSTQ
APTATTTQQTTETTTHSRPVDISCLPMNLMGEMDHVTQEEFTSKLTDSCRYDRLIKPTVPKLLEVNMQIDLTHIESSDAQ
QMKSYILVQLGYKDVRLKYDTYSPKRGCIQGEEPLRNKIWVPHITVRNERESSMMGLDGKDIFVQVMPDGEVNYSYRMTL
TFYCWMDLKKFPFDYQICRITWISWSYDTTNLLLKWSNEDPVQIAKNLHLTEFVLDSFWTEASTVPASFSTGGLVGNYSA
LTFKFKLRREIGYYIMDYFLPSMFLVATSWVTFWLQADASAPRAVLGTSTMLSFITLNGGLTKNLPKVSYIKASEIWFLG
CSTFIFCAMAEFAFVNVIWRRRKQVEVKKASSKHILIGAVTPSLARRHVRRIESFNSIYKTRSCTSLNENDENEKENSQN
NYLTVHSFPTSIQSIPTIKIPNSSQDELINIEDHVTTIPVPGKPGDKRNSPPHQAWTTMTPHEVANWIDKKSRIAFPVAF
IIFNLFYWSFVYAL
Swiss-ProtGlutamate-gated chloride channel
SUPERFAMILYSSF63712  Nicotinic receptor ligand binding domain-like superfamily     
Gene3DG3DSA:1.20.58.390     
PfamPF02931  Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain     
PRINTSPR00252     
ProSitePatternsPS00236  NEUROTR_ION_CHANNEL; Neurotransmitter-gated ion-channels signature.     

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