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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO002277
PositionSeq_1103023:3538793..3546348[GBrowse]
sequence mRNA:
>DPO002277-RA
ATGACTTCGAGTAGATTGGACCGATTGTTCGTCCTGCTAGAAACGGGAAGTTCCGCGGTAACAAGATCAGCAGCAGCAAA
ACAACTTGGCGAAGTGCAGAGATTACATCCGCATGAATTATCAACTTTACTATGTCGCACTGTCACATATCTTCGCTCTA
GTAACTGGGAAACTCGTATTGCTGCCAGCGATGCCATCCGAGCAATTGTCAGCAATGTACCCCAATGGAATCCTAGGGGA
ACTGATGTGAAGAGTGAAGAGTACGATGGTGCGTCAATGACATCCTGTGTTGGAAGACTGAGATTTGAGGAGTTTGACAT
GTCCAAAGTGCTTGCTAATAGTTCGCATTTAATGGCCTCGGAAGGGAAGGAGTTTGATCTCGAGGAAGATTCAGCTATGG
GGCTGGAAGTAAAAGAGCGCTTGGCAAAGCAAAGACAATTACTAAACAGCAGATTAGGCTTGGATGTGGCCGCCAAAATT
GGCTTTGATACCTGTTCCCTATTTACAACAGAAGATCTGATGACCAACGTGGATAAAACTGATTCAACTCCAATTTGCAT
GAAAATTCCGGTGAAAGATGTGATATGCAACTCTGCAGAAGGTTTGAGCTGTCGCGAAATGAATAGAGCTAAGCGAAAGG
CCAGACAAGCTGTGAATAAGCAGAAATCGCGCGACGTCGGCGAAGACAATAGTTTCAATGGAGATGAGGTCGATCGCAAA
AAACTTAAGACTGAAAGTGACGAAAATATTATTCCTTGTGATTTCGACCTTAATGATTCAGTTGATTGGCCGTTGGAGTG
GTTTTGTGATCAGCTTAGTCATGATTTATTTCATTCGAGTTGGGAAAGGCGACATGGTGCTGCCACCGCTCTCAGGGAAA
TTATTTCCATTCACGGGAGAGGAGCAGGAAAAGCTACATACATACCAGTTAAACAGATGGACTTTTATCACCAAGTTTGG
CTTGAGGACATGTCAATAAGACTGCTCTGTGTTTTGGCCCTCGATAGGTTTGGCGATTTTGTGTCTGATGCAGTAGTAGC
GCCAGTCCGCGAAACATGCGCTCAGGCCCTTTGTGCCGTTCTAAAGCTAATGAATCCGACGAATTGCGAAAAAGTATTAG
ATACGCTTATTCAGCTTTTGAGCCATCAGGACTGGGAAGCTCGGCATGGAGGTCTACTGGGTTTAAAATATCTTCTGGCT
GTTAGGGCCGACCTAATTGATTCATTGTTGCCAAAGTCATTTCCCTATATCCTGCAAGGTTTAGCAGATACTGTAGATGA
TGTGAGTGCGGTAGCAGCCTCCTCATTGATACCGGTTGCGCCCAAATTAACTCAGTTAGATCTGGGTTCCGTCCCCCAAG
TCATTAATAAACTTTGGGACCTACTATCAGAACAAGATGAACTAGCAGCGGCTTGCAATAGTTTCATGGGTCTGTTAGCA
GCCATTCTGAATCTACCTCAAGCTCAATCTCTCTTACCGATACAACCTCTTAGTAATGTGATGCCCCGTTTGTGGCCATT
TTTGTCCCATAGCACTTCCTCAGTGCGAAAAGCCACCTTGGACACATTGAAAACGCTTACAGAGAAACCATCCGATGGAT
CTAATATTTTATGGGATGCTCAGTTGCTGCAGGATGCAATGCGCCATGTTTTCCAAAGACTTTTAGTGGAACCAATTGCT
GAGGTCAGAAACCTCGTCGAAAAAGTATGGGAGAATTTAGTGAAAAATTCCGGCCTTGTTGAGTTGCTGCATGCTGCTTG
CCCCTTTATAACAACGTGGTTGTTTTTGACTATGCAGCCCACTAAAGTGCCATTTGATCCGAATTTTTTTATTCATGCCA
AAAGTCAAAAGAAACCAAACGGTTTCGACCATTCGATCGGGCATCCTAAGTATTTTATTGGAGGCAGTGAAACAACTCCT
GTGTTGACTAGAGAGGCAAACGCCGTTCAAGTTCGATGCATGGCTGCTCGAATGTTAGGCCTTTTGTCTTGTTACATAGT
TCGATCTGCCCCAGGGATAGATTATAGCCAGGGTCTGGAAAAGCCTATAGACTGTTACGAAAAGGTTCTATTAGTTCATT
TAAATACCAAGTCAGCTTTACAGAGGCTGGTGACAGGTTTAGTTATTTCTGAATGGGCAACGTTAAACGCCGAAATCGAG
TGTTGTCCGCTAGAGTTAAAAAAGCGGCTGCACCAGTGCCAAGACGAAATGTTATATTTTGATGAAATTGCGCATAGTTT
TACCAAATTAGCACAGGAAACTCGCGATTTTCTGGCCACTCTTAGACACTACAAAATTCCAATTGAAATCGACAATGAGC
AACCTTTAACTTTGCCTCTGATAGAGCAACTCACCGGACCGTCCACTGATAGTATTCTAGTCAATATTAAGCTTAAGTCT
AAAATTTTAAACAATCTGCAAGAACGAAGAAGATCGATTCAAAGTTCGGTCATATCGACCGCACTAGAACAAAGAACTCT
TAATATTAGTACAAAAGCCGCTCTCTCCGGAGCCATTGTGATGTTTCAAGCGCTACCAGACAAATTAAATCCGGTAGTAA
AGCCACTTATGGAGTCAGTCAAATACGAACCGGAGGAAGTTCTTCAGCAGATCGGTGCGAAACGATTGGCAATTTTGTTG
GACTATTGCCGATTGAGAAATCCATGTCCGAATGAGAAAATCCTAACGAATCTTTGCACATTTCTACGATGCGATCCCGA
GTATACACCACAAATTTTTCCAGATCAAGAAGTAAGCTGTAGTGGTAGCGAATTATGGAGGCACGAAAATTATAACGGCG
TACTGACTCTAATCAACCAGCAGAAAATGGCTGAAAAAGTTGCCTTTAAACGGTCCAACAGCTCAGGAAGGGGTCCAGGT
AGGCCTCCAATGAATGAAACAAGTGTGGAAGAAGTGCCTAAAGATGAGGAGCCTCAAAAGCTGAATCGAATTCAAAGGCG
AGGCGCCACATTTGCGTTGACCGCAATAACTCGATATTTTGGAGCTGAACTACCGGAAAAAATGCCCAAATTGTGGGACC
TGATCGTTGGTCAGTTAGTCAATACAGTGAATCCAGGCGACTTCTTAGCGATATGTGGGCAAGACCAGGTCGCCCAGCAA
TTGGTGTGGGATTTACAGGTGCTGGAAGTGACCTCTTCTAGTGTGCACCAGAACATTCTTCCGCAACTTATGGAAAATAC
TTTGGAGAGATTGTGCTTACTTCTGTCGCATCCTTACAGAGCCGTGAGGCACTTGAGTGCCAGATGTTTGGCTGTGTTTG
CCCAAATTGACTCGGTTAAAGTTATGGAATTTGTAGTTAGTAAGATCTTGCCTAAATTAGGAGCAACACACTGTGATACC
GATAGACAAGGAGCTGTAGAAGCTCTAGCGTGCATTGTCGACAGTCTGAAATTTGACGTAATTCCATATGTAGTATTATT
GGTAGTGCCTCTGTTGGGTAGAATGTCTGATCAAAATATGTCCGTAAGACTTATGGGGACTCTCAGTTTCGCCACTTTGG
TGCAACTTATGCCATTGGATGGAAGCGTTCCAGAACCCCCAGCCCTGAAAGATAGCGTTCTAGATGCTGAAAGAAATAAG
GAGAGGGAATTTTTGCAGCAGTTGTTATCACCTTCATCTATACCCGATTACAAAGTCCCAATTCCGATAGATGCAAAATT
GCGGACTTATCAGCAGGCGGGTGTTAATTGGCTGGCGTTTCTCAACAAATACAAACTTCATGGAATCTTGTGCGACGACA
TGGGCTTGGGAAAAACTCTTCAAAGCATCTGCATTTTGGCGGGTGACCATTATGATCGCGACCAGATGTACAAGAAGAAC
AAATGTCCGGATTGTGCCCCCTTGCCCTCGTTAGTTGTCTGTCCTCCAACTTTAACAGGGCATTGGGTTTATGAAGTCGG
AAAATTCGTCCAACCTAAATATCTGCGAGCTCTTCAGTACAATGGCAATCCGGTTGAACGCGAAAAATTGCGAAATAAAT
TCCGAAAATACCAGTTAATCGTGGCGTCTTATGACATTGTTCGGAAGGATAATAATTTCTTTTCGCACATCAAGTGGAAT
TATGTAATATTGGATGAAGGGCACGTGATCAAAAACGGAAAGACTCGGACTAGTCTGGCCATCAAAAGTTTAATAGCAAA
TCATCGGTTGATTCTGAGTGGTACCCCGATACAAAACAACGTGCTGGAACTTTGGAGCTTATTCGATTTTTTGATGCCAG
GATTTTTGGGAAGTGAGAAGCAATTTACCGCTCGGTATTCGAAGCCGATATTGACAAGCAGGGATCCCAAATGCTCTCCT
AAGGATCAGGAGGCTGGAGTCCTGGCAATGGAATCTCTACACAGGCAAGTGCTACCGTTTTTACTGCGCAGAATGAAAGA
AGATGTTTTGGATGATCTACCCCCGAAGATAACTCAGGATTATTACTGCGAGCTGAGTCCTTTGCAAGAACAGCTCTATG
AGGACTTTTCCAAATCTCAAGCGCATCAAACCTTACAAGAATCAATCACATCCGGCGCAACAGCATGTTCAATCCAAGGA
AACACCCATATATTCCAAGCGCTCAGATATTTGCAAAACGTTTGCAATCATCCTAAGCTAGTGCTGAATTCTGCCCATCC
CCATTATCAGCAAATAATATCGCAGATGCAACAGAGCAATTCGCAGTTGGATGACATAAGCCATTCGGCAAAATTACCCG
CTCTTAAACAATTATTAAACGATTGTGGCATCGGTCTGAACGACGGTGGTTTGTTTAAAGAATCGGCCGAAATTGCAGTC
AATCAGCACAGAGCCCTAGTTTTCTGTCAGTTGAGAGCTATGTTGGATATAATTGAGCATGATTTGTTCCAGAAGAATAT
GCCCAACGTTACATATCTAAGACTCGATGGGTCCGTAGCGCCTGTTAATAGGCACTCCGTTGTCACTCGATTTAACAATG
ATCCTTCTATTGACGTTCTTCTGTTAACAACGCAAGTCGGTGGTTTGGGATTGAACCTAACTGGCGCAGATACAGTGATA
TTTGTTGAACATGACTGGAATCCGATGAAGGATTTACAAGCGATGGATCGAGCCCATCGAATCGGTCAAAGGAAAGTTGT
TAACGTGTACCGGCTTATAACTCGCTCAACATTGGAAGAAAAAATAATGGGATTGCAGAAATTTAAAGTTCAAACAGCGA
ATACGATCATTAGTGGGGAAAATAGTAAAATGGAAACCATGGGCACTGAACAGTTATTGGATCTATTTTCGAATAAACCG
AATGGCGGTAAAGACAGTAACGGATCAGCTTCGACGTCTAACAATGGGATGAAGGCCATTCTAGACTCGTTACCTGAATT
ATGGGAGCATAAACAGTATGAGGATGAGTACGATCTTTCACATTTTATGTCCAAATTGAACTAG
PEP:
>DPO002277-PA
MTSSRLDRLFVLLETGSSAVTRSAAAKQLGEVQRLHPHELSTLLCRTVTYLRSSNWETRIAASDAIRAIVSNVPQWNPRG
TDVKSEEYDGASMTSCVGRLRFEEFDMSKVLANSSHLMASEGKEFDLEEDSAMGLEVKERLAKQRQLLNSRLGLDVAAKI
GFDTCSLFTTEDLMTNVDKTDSTPICMKIPVKDVICNSAEGLSCREMNRAKRKARQAVNKQKSRDVGEDNSFNGDEVDRK
KLKTESDENIIPCDFDLNDSVDWPLEWFCDQLSHDLFHSSWERRHGAATALREIISIHGRGAGKATYIPVKQMDFYHQVW
LEDMSIRLLCVLALDRFGDFVSDAVVAPVRETCAQALCAVLKLMNPTNCEKVLDTLIQLLSHQDWEARHGGLLGLKYLLA
VRADLIDSLLPKSFPYILQGLADTVDDVSAVAASSLIPVAPKLTQLDLGSVPQVINKLWDLLSEQDELAAACNSFMGLLA
AILNLPQAQSLLPIQPLSNVMPRLWPFLSHSTSSVRKATLDTLKTLTEKPSDGSNILWDAQLLQDAMRHVFQRLLVEPIA
EVRNLVEKVWENLVKNSGLVELLHAACPFITTWLFLTMQPTKVPFDPNFFIHAKSQKKPNGFDHSIGHPKYFIGGSETTP
VLTREANAVQVRCMAARMLGLLSCYIVRSAPGIDYSQGLEKPIDCYEKVLLVHLNTKSALQRLVTGLVISEWATLNAEIE
CCPLELKKRLHQCQDEMLYFDEIAHSFTKLAQETRDFLATLRHYKIPIEIDNEQPLTLPLIEQLTGPSTDSILVNIKLKS
KILNNLQERRRSIQSSVISTALEQRTLNISTKAALSGAIVMFQALPDKLNPVVKPLMESVKYEPEEVLQQIGAKRLAILL
DYCRLRNPCPNEKILTNLCTFLRCDPEYTPQIFPDQEVSCSGSELWRHENYNGVLTLINQQKMAEKVAFKRSNSSGRGPG
RPPMNETSVEEVPKDEEPQKLNRIQRRGATFALTAITRYFGAELPEKMPKLWDLIVGQLVNTVNPGDFLAICGQDQVAQQ
LVWDLQVLEVTSSSVHQNILPQLMENTLERLCLLLSHPYRAVRHLSARCLAVFAQIDSVKVMEFVVSKILPKLGATHCDT
DRQGAVEALACIVDSLKFDVIPYVVLLVVPLLGRMSDQNMSVRLMGTLSFATLVQLMPLDGSVPEPPALKDSVLDAERNK
EREFLQQLLSPSSIPDYKVPIPIDAKLRTYQQAGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHYDRDQMYKKN
KCPDCAPLPSLVVCPPTLTGHWVYEVGKFVQPKYLRALQYNGNPVEREKLRNKFRKYQLIVASYDIVRKDNNFFSHIKWN
YVILDEGHVIKNGKTRTSLAIKSLIANHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEKQFTARYSKPILTSRDPKCSP
KDQEAGVLAMESLHRQVLPFLLRRMKEDVLDDLPPKITQDYYCELSPLQEQLYEDFSKSQAHQTLQESITSGATACSIQG
NTHIFQALRYLQNVCNHPKLVLNSAHPHYQQIISQMQQSNSQLDDISHSAKLPALKQLLNDCGIGLNDGGLFKESAEIAV
NQHRALVFCQLRAMLDIIEHDLFQKNMPNVTYLRLDGSVAPVNRHSVVTRFNNDPSIDVLLLTTQVGGLGLNLTGADTVI
FVEHDWNPMKDLQAMDRAHRIGQRKVVNVYRLITRSTLEEKIMGLQKFKVQTANTIISGENSKMETMGTEQLLDLFSNKP
NGGKDSNGSASTSNNGMKAILDSLPELWEHKQYEDEYDLSHFMSKLN
Swiss-ProtTATA-binding protein-associated factor 172
KEGG     K15192     
SUPERFAMILYSSF48371  ARM repeat superfamily     
Gene3DG3DSA:1.25.10.10     
PfamPF12054  DUF3535; Domain of unknown function (DUF3535)     
SMARTSM00490     
ProSiteProfilesPS51194  HELICASE_CTER; Superfamilies 1 and 2 helicase C-terminal domain profile.     
CoilsCoil

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