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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO002106
PositionSeq_1103023:1062772..1069635[GBrowse]
sequence mRNA: 
>DPO002106-RA
CTTCTATTGAACGGGTCACGCAGCGGCGCTGCAGGCATAATTTATTTCGGTGTTTCTACGGTATTGCATTGTGTTGCACA
TCTGTTGTGTATTTGTTATTTGTTCCTCCTTTATCTTGTGACCAAACTCTAGCGAAACAAACTATCATTAACTTGGATTT
GTTTTGATTTGGTAAATCAAAGAACAGAAGGTGAGTATTTTAGATCCCTTGTTTCTATAATTGAATGATTGACCTAAGCC
GAGGCGTTTCAAAATGGAGGTCTTCATTTCGATAAATAGTGTCTAGAGGTTTTTATTTTACAGTTGCTCAGTCACTCAAA
TCAAATACAATTGGTTGAATAATCTAAGCTCTAATCATTATTGTGGGCAATTAATAATATATAATTGAGTACCATAGAAG
CCAAAAGTTAAAAGTTGTACACGTCGATGATGGGAATATTACCGACGTTTATTTTCAATTGATGCCGAATTTTATTTGTT
TAATATCGTATCTAAAATTTCACCATTTGAACATAAAAACCAATACCTTAAAGTACCAGCAGTAACAGTAAACAGTAGAT
AGATTTTAACGTTTTTATTAGCATTAGCAGGTACAAGGTTAATGTCTGTAGTTACGCCAGTCGGTTCAATACATTAGTTA
AACAAAAAAGTTAGAAATATCAGGCTTCGGTCTGCCCCTTCAAAAGTGTGCTCAGCTAATAGATAATATTTTTATTAACA
ACTTTTCTTGCTGTATTTTTGCAAAAATTAAGGTTTTGACCACTTTTCACTCATTGAAATTCACTACTTTTCTAGATAGG
GATGGATCAAGATAAGGATGATGTCCGTGCTGTCTGTCGCCCGAAAAATTTCGTGCATTGCCAATTTTACATTTTATACT
TGATTTAGAAAAAAAAGAACTATTTAGGATAGTTTCGATACATTTATTTACTTCTGGCTGGTTTTGTTTAGAATAGTTAA
GTGCTTTTTTGTTTGTTTTATGTTAATTAAACTATCATCTATTTTCTGAGCCCATTTTTAGCGGGGCAGACCAAACCTGA
TGTGCATCGATTTCATGTAACATTGAGATCTTGAGAGTAACAAGAGAAAATATTGCTACCACTACATTATTTAAAAAAGA
CGGACACTAGGTATGAGAAGTTAGAACGGCACTTTGGCTACTTGCAGTACGTATTGCGTTTATTGAGCATACCTCAATAA
ACTGTATATAGCTTTTCAGTGTGCAGTGATGTGTACTGTATAATTGTGTGTAACTTGTTCCATCATCGTAAACCTGAACG
TTTTATAGATGAAAAAGTGCACTTCTATTTTTAATATTCTTTATTCACCTGACATGAGTAAGAAATGTAATTATAATCGC
TTGGAATTAATCCAACTTTAATTCTCAACTTAATTCAGGCATTAATTTAATTATTTAATAAAATAGCTACTTTTATTACA
GTAAAGGGCGAGTAAAGTATCTAAACTTAAGAATACTAAAAGCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
ACAGTTTTCCATTGCGCCCGTGTAAGTCATTAGTACAACATTTTTTACTGCGACTTTTACTATTGGCGTCTAGGGTCTGA
ATTATGATAACCTCATAAGAATCTTTACATGTCATGTCCGCCATTTTAATGTGATCTGAGCATCTGATCTATATATCCTA
CTATCATTCAAGAAAGCTTTTTTTTTTTCAATATAGGTTGTTGGAATTTTATGGCTACATATTTTACCAATCCAATATAT
ATGCGATTGTATTTTATCACTTTTTCAAAACATCACTTAATGAAGTGTTTACCTAATACTAGACAACTATATCTGTTATA
TTTGAACTGACGCCAATTTTGTGACAAAGACATACGAAACGGCATTATCCTTGTATAATAAAAATGTAGTAACACCACAC
GATCTAAAATGAACTTGATGTCTAACCATATAGATAGAAGTGATATTAGTTATAAGTATTGTTTTCCTTGAATTTACTTG
TAGTGGTTGTATGCCGCATATTGACTTGGTAAGTGTGTTTTGTGGTGATTTCACAAGGGGAAAAGGAATATTAAGGAAAA
TTAATTTTATTTATTGTTCTAAACGCGAACTACAGTAATGTATGGATGTCCAAACCTCCTATCATTCGAATTTTACATGT
CAATGTGTGAGCATGTGAACACTGATTTTTGTACTCTGAACTTTTTGGGGATGAGGCGAAGAAAATTTGATATCTCCGAG
TAACTTATGGGAGGCATCGTGCCTCCCCTGATCTATTGGGAGTTAGTGAAGTACAGATTAAGTCTTGCTGATAATTCGAT
AGATAAAACAAGTTGAAATAATATAAGCAAGAGCCGATGGTGAAGCTAACGCTTCGTTAAGGGAATACAAGGTGTTTAAG
TTTGGAGTAAAAATCGAATGTATTAGTTGTTGCCAAACGGCTGTGGACTGGCTGGCTGGCTACTATTAAATAATAGTAGG
TACAATCATAGAGAAATTAAAATAAGAGAGGTGGCGGTATAATGTTAAAACTTAGAACCGCGTTGCGCTACAACCGGCTG
ACCGTCAATAACGGGAAGCTTTGACGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGCCAGTTGCAGCGCTACCTGCGTAACGCGGTGA
CAAGGACGCCCATATGATTGCCACCTCTCTTATTTTACTTACTCTATAGGTACAATACTGTACGAGAGACGAAAGTCGAA
GTTCTCGGGCGCCCACTTTACGGAGTGGGGGGGCCTTCGACTTTCGTCTCGTGTACCGTATACAATGTTTCTTAATCTTC
AGTGCAAATAGCAGGGAAAGGGATAATGTTTAAAAAAAACCTACTGTGAAAATATTGTCAAAACAGTCAGCTGACAGTCA
AGCTGTCAGAAGACTTACTTCGAGTACATTTGTTGGCAGGAGTGTTAAGAAAGGTTCAAACTTATCTATAAATCGAACGT
GTTCGTATCATATCACTTTATTATGCGTCCTGTAATCGGAAATGTTGAGAAATCGAATGGGTTTTCCCGGCACCACCGCA
AGTCAAGGGCCGACTGCTCTGACGCCACATCTGTGGTTTCTTACCGGCTCGGCCCACGCATGACGTCAGAGCAGTTCGGC
TTTAACTTGGCGGTGGTGCCGGTTTTGACCATTTTCAGTTCGGATTATCCATACATCACTGTATCGATATTTATGTCGGA
AAATTGTAGTTGTATTTTTAAAATAGTTGAAATCGACGGCATGACATGTGTTTATCGAACAGAATGAGCGGCCGGGCGTT
TTCAACGCGAATGGCTACAGCACGCTCTTCTATTTTCTGTTTTATTGTTTTATTTGACGTGTTTCGACTTTCAGGCCGAA
CAAGATGCCGGGTTTTAGCACCGCGGGCACGTTCAAAATCTTTGTCGGAAACCTCGCCGAAAAAACCAGCGTATCGGAGC
TTCGTCCTCTGTTCGAGAAGTACGGCAAAGTTGTTGAATGCGATGTCGTCAAGAATTACGGGTTTGTCCACATGGAAAAT
GAATCGGAAGGGCGCGAGGCGATCCAGCAACTTAACGGACAAATGATTAATGGTCAATCCATGAAGTGCGAAGCCGCCAA
GAGCCGCAAAGCGCCCCAAACGCCGACCATAAAGATTTTTGTTGGTAATCTAACCGATAACACTAAAGCACCTCAGATAC
GGGAGTTGTTTAAAAAATTCGGAACGGTCGTTGAGTGCGACATCGTTCGGAATTATGGATTCGTACATCTTGAATCGTCG
GGAGACGTAAACGAAGCAATTAAAGATTTAAATGGTCAAATTGTGGATGGACAGCCCATGAAAGTCCAGATTTCAACGAG
TCGTGTTAGGCAGCGTCCGGGAATGGGTGATCCTGAGCAATGCTATCGTTGCGGCCGTGGCGGACACTGGTCCAAGGAGT
GTCCTAAAGGAATGGGACCCGACAGGTTTCGCGAACGCATGTTCGGACGCGATCCTTACCCTCCTCCACCACCGCCACCA
TTCCTACGCGACCGGATGATGGGACGCTTTGGGGATGCGTATGACAGCTACTATGATCGTCGTTTTCCCGAGGATTCCCG
CGACTTGTACGAGCGTAGGTACTCCAGCATGCCGTCGAGAAGCGAAATGAGCCTTCGAGGAGGCAGAGATTTCTTGCCTC
CGCCATTACCCCCAAGACGGGAGCCACTACCTCCCATGCCCTCAATTGGTCTCAGAGGATCTTCGAGTGGACTGAGTTCC
AGAATGGGCGAATCCAGCTTCTCTCGCAGTCCGAGTGATTATAGTATGTTCAGTAGACGATCGCCCCCTCCAAGTAGCTC
TCTTGGTGGGTCGAGAATGAGCCGAATGTATGAAGATTTCAGCAGAGATACTTTTGACGATCGAAGACCACCAATGAGAG
GACCATCACCCCCTAGGCGGTATGCCCCATACTAAAGCGGTTTTCCACATTCATCATTATTTACGTAACTGTAACTAAAT
ATGCTATACATACACGATACTTTTTCAATAGAAATTCCTACTGAATCCACGATTGTAAATTAATTTTATATTTTGGGAGG
AACCGACTACCTTTCAGGACATGACTGTTCATGTAGTTCTGTTTCATAAGCATATAGATTAATTGTCTGACATTTGATAA
TAAATTGCACACTGATATGAA
PEP: 
>DPO002106-PA
MPGFSTAGTFKIFVGNLAEKTSVSELRPLFEKYGKVVECDVVKNYGFVHMENESEGREAIQQLNGQMINGQSMKCEAAKS
RKAPQTPTIKIFVGNLTDNTKAPQIRELFKKFGTVVECDIVRNYGFVHLESSGDVNEAIKDLNGQIVDGQPMKVQISTSR
VRQRPGMGDPEQCYRCGRGGHWSKECPKGMGPDRFRERMFGRDPYPPPPPPPFLRDRMMGRFGDAYDSYYDRRFPEDSRD
LYERRYSSMPSRSEMSLRGGRDFLPPPLPPRREPLPPMPSIGLRGSSSGLSSRMGESSFSRSPSDYSMFSRRSPPPSSSL
GGSRMSRMYEDFSRDTFDDRRPPMRGPSPPRRYAPY
Swiss-ProtRNA-binding protein lark
KEGG     K13187     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:4.10.60.10     
PfamPF00076  RRM_1; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00343     
ProSiteProfilesPS50158  ZF_CCHC; Zinc finger CCHC-type profile.     

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