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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO001659
PositionSeq_1102713:2305420..2312528[GBrowse]
sequence mRNA:
>DPO001659-RA
ATGGATGGAACTGAATTTCTCTTCTATTCTATTAATTGCCTTAAGAGTCACAAAGGAAGACCAAAAGTAACAATACCTGT
CTACAATGATGATGATTCCAATAATTTTAGTGATTACGGAATTTGCAGTAGTAGTTCGAAGGCAAATAGCGTAAAAGATG
ACCATACTGATGATAGCTCCAGCCTCTTGGAAAAACAGAAGAATCCCGGAATTTCCATTCAAAGTGAAGATGAAACCACC
AAAAGCTACACCAAAAGTCAAGATAGAGAAGTATACGTTAATAGCAATGTGAATACGCGCTCGCCCAAAAATGTCACGGC
TCCAGAAGTTCCCCCAAAAATGTCTCCAAAATCTTCAAAACCCAAATATGACAATAGTTTTGTCGAAGATACTTTCACCA
CTGACAATTCGAAACAATATACCTATGAAGGAGCGATTGAAGATTACAGATCTAGAATTCAAAAAAAGATTAAAGTAGAT
GAATATATTTTCAGCAAAAAAGAAGTGCTGAATAGATCCAAAGAATATTCTGAAGCTCAAAGTGTTCTTCCTAAAGGAGA
AATTTCAAAGAGAAAAGGATTGTTTGAATCAAGTAAATCCATGGAAATCGATCATATGGAATACACGAGTTGTAGAAGAG
TATCCGAAGACTTTGTCAATGCAAGGAGTTTAAAAGATCGATTAAAAAGTTTAGAATCGGCCACAGACCAATCCCTAACT
AAAATTGACAAAAGTGAATTTCAGGTGTCTGTAAAAGATCGGTTGGCTAGCTTTAACCGGCGAATTGAACCTGTAAATAA
AGAATTGGAGAGATCAAAAATAAGCAGCTACTCGTTAGATAAATCTGTCAGTACTCCATCATTTCAAATTTACACAAAGC
CTGAACGACTCTGGAAAGCAAGTGAGAGGAGTTCAAGTCCAGAAGCTGAAACATATTTAGACAAATTAGACATGTTCCAT
AACAACTTAAACAATTTAATGGGTTCGAAATCTGTCGATGATAATATTGGTGATTATTGCACTTCGAATGCTACTTATCC
TCCTTCTACATCGTCTGTTGACTTAGCGGGGGTACTGTCAGACAGAGAAGACAGTGGCATACATACTGCCGATGTATCAT
GCTCAGTCAGTCAAGCTGATGAGCCTATAGATACGTACGCTGAAGCAATTTTTAACACTATTCCAAGTTGCATCGAGAAG
TTGCAAAAAACCGAGGAACAAAGTTCAAATCCCGAAATTATTCGAGAATCCTTATTGCCAGCTACATTTGTGAACACTAA
TCAAGACAATATCGAGTCCAAGAGTGATTTTACAAGAGATGATATTATCGACTTCACCAAAGAGTTTTTGGATTCTCTAA
TTAAAGATGCGACGTTAGAAATCGCTAATCAAGATGTCGCCAAACACACAGAAAAAGCGTTAAAGAAGAGCAATTCAGAT
GAGAAACGCGACGTAAAAAGAAATGGAGACAGTGTCTCTGAGTCTACGTTGAATCAAGATATTGAATTTAGGTCTTTGTC
TGACACCAACTTTTTACCGATAGATATTTTCACAGGAGACTTTCCACTAACATCTACTAAATTGCAACCACCCAACGTTA
GACCACCTCCGCCTCCTCCTGTTGAAGATGGTAATGGAGAATCTACTCCAAAGCCTCTCCGACGACTAAACTCGACTAAA
AGAATTAAAAAAGAGATCAACAGTAAAAGATCCAGCTTTTTAGGATTAGACCAAGAAAATGCCTTTGACAATGACCAGAT
TATTGAAAAATCACTAGATTACAACTCATACCAACCAAAAGAAACAAAGCAGGAAAAGTCGCTGTATAGAAAAATTTTAG
ATCATGAATCAAATACTGGTTCACTGAGCAAAGTTGAGAGCCAAGATTCAGGTTTGGATATTGATCGAGGGCGATTATCT
AGTGACACTTGGTGCAGTAGTGTACCCAGCCATGACAGGCAGGATAGTGAACACACAAACAGCATAACTTCGGAGGAAGA
CGAAATCACAAAGAAGGAACGGGAGATTATCGAAATGGTGGAAAAAGAAGAGAAATCTAAAAGCAAAGTCAACTACATTT
CCAATTCTCAATTTAACCAAGCCAAATACACAAATAATATCCGGAGCTCTGAGCACACCTTAGGGAGCGAGAAATTCTGC
AATCCATATTATCCGGAGGCATCACCACATTATATAGATGACCAAGACTCAGAAGTACTAAAAGTCGAACGGGAGTTACA
GCAGCTAGAACAAGAAGAGTTGGAAAGGCAACGCGAAAATATTATATTTAGAGAAAGTCGTAATAGAGCGAGATTAGCCA
ACAGACATTCCCTGGAAAACATATGCGATGATATATATCCTCATTATTCTAAATCAGAGTACAGAAAGTCGCTTCCTGAT
TTATCCACCGAATTCCAGCAATCAGCTGGTAACGCTAGTTCGTCCTATTATGAAAATATTGAGCCCATTAAATGCATGCA
ATCCACACCTGATATCCAGCATGCATATCAATCGTCCGCCCCGGAACAAAGAGGTTTTGTCAGAAATAACCGTCTAGCCA
TGGATCATAGAAAATCAATGCCAGAATTAAAACATGACTCCAGAGGACTAGGATTTACGTCTCCTCCAACGTTCGACAGG
CAACCTATTAAACCCAGCACTAAACCGTTGAGAACCATTCCGAATCCGAAGCCAAGGATTTTAGCGAAGCCTAACCTGAA
ACAACTAAGCGCTATACCGAAGAATCGTCATCCAGAAAATTGGGCTGGTTCAAAAGCAACACCACCAGGCGCCAAAAGTT
ACAGTCAGCATTGGGTTATCCAGGAAGCGGAATTGCGAAGACTATCTGAACATCATCAAAAAGCGACTTCGCCCATTAGA
AGCAGTCAACACGAAAAACCTCTTCCAGACTCTGTTATACAAACAATAACTCAAAGGGTTCAGAATCGTAGTGGATTGAT
TGATAGAGCACAACCCAGGAAGAGAATTGAGCCTGCTTTGAGTACGGATTACAATCCCTACCCCATCTACGTAAACCATC
CCCAAGCCATGGGTCATGCAATGCCCGCAGGGTCGTTTTGTCCACAATCTACTGAGGACATTATTCAAGATACCATGTTG
AGTATTCAGTATAAACGTGCACTGACTAAAGGCCGGGACACATGTATCCGATCCGGCTCCGATCAGAGCATCTTCCGTCG
ATGCCCAAACACTCGGATCGTTGCGGGATCGGAAAGGAGCCGTCGACGTGGTGCTGCAATGATAATTGAAAGCTTGTGCT
TGTTCTACCATATGAAGTGTTTCAAATGTTGCGTCTGTCACATCGAGCTTGGAGACGGACGTATTGGCACAGATGTTCGA
GTTCGAAATCAAAAACTACACTGCCATAATTGTTACTCTAGTGATGATGGTGTAAAATTTAGTTGTGTTTGA
PEP:
>DPO001659-PA
MDGTEFLFYSINCLKSHKGRPKVTIPVYNDDDSNNFSDYGICSSSSKANSVKDDHTDDSSSLLEKQKNPGISIQSEDETT
KSYTKSQDREVYVNSNVNTRSPKNVTAPEVPPKMSPKSSKPKYDNSFVEDTFTTDNSKQYTYEGAIEDYRSRIQKKIKVD
EYIFSKKEVLNRSKEYSEAQSVLPKGEISKRKGLFESSKSMEIDHMEYTSCRRVSEDFVNARSLKDRLKSLESATDQSLT
KIDKSEFQVSVKDRLASFNRRIEPVNKELERSKISSYSLDKSVSTPSFQIYTKPERLWKASERSSSPEAETYLDKLDMFH
NNLNNLMGSKSVDDNIGDYCTSNATYPPSTSSVDLAGVLSDREDSGIHTADVSCSVSQADEPIDTYAEAIFNTIPSCIEK
LQKTEEQSSNPEIIRESLLPATFVNTNQDNIESKSDFTRDDIIDFTKEFLDSLIKDATLEIANQDVAKHTEKALKKSNSD
EKRDVKRNGDSVSESTLNQDIEFRSLSDTNFLPIDIFTGDFPLTSTKLQPPNVRPPPPPPVEDGNGESTPKPLRRLNSTK
RIKKEINSKRSSFLGLDQENAFDNDQIIEKSLDYNSYQPKETKQEKSLYRKILDHESNTGSLSKVESQDSGLDIDRGRLS
SDTWCSSVPSHDRQDSEHTNSITSEEDEITKKEREIIEMVEKEEKSKSKVNYISNSQFNQAKYTNNIRSSEHTLGSEKFC
NPYYPEASPHYIDDQDSEVLKVERELQQLEQEELERQRENIIFRESRNRARLANRHSLENICDDIYPHYSKSEYRKSLPD
LSTEFQQSAGNASSSYYENIEPIKCMQSTPDIQHAYQSSAPEQRGFVRNNRLAMDHRKSMPELKHDSRGLGFTSPPTFDR
QPIKPSTKPLRTIPNPKPRILAKPNLKQLSAIPKNRHPENWAGSKATPPGAKSYSQHWVIQEAELRRLSEHHQKATSPIR
SSQHEKPLPDSVIQTITQRVQNRSGLIDRAQPRKRIEPALSTDYNPYPIYVNHPQAMGHAMPAGSFCPQSTEDIIQDTML
SIQYKRALTKGRDTCIRSGSDQSIFRRCPNTRIVAGSERSRRRGAAMIIESLCLFYHMKCFKCCVCHIELGDGRIGTDVR
VRNQKLHCHNCYSSDDGVKFSCV
Swiss-ProtLIM and calponin homology domains-containing protein 1
KEGG     K06084  LMO7, FBXO20; F-box protein 20     
Gene3DG3DSA:2.10.110.10     
PfamPF00412  LIM; LIM domain     
SMARTSM00132     
ProSiteProfilesPS50023  LIM_DOMAIN_2; LIM domain profile.     
CoilsCoil

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