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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO000555
PositionSeq_1102823:31044..35453[GBrowse]
sequence mRNA: 
>DPO000555-RA
ATGGAACGGTTATGGTATTCTCCTCCCAGACGAAGTATGAGCATATCTCCTGAACCTCACAGACGAAATTCGAGGTCGAA
ATCCAGGTCCCCAGGACACTACACCAATAACAGAAAACATAACGGCTATAACAATCATATTAAACGAGTAAATAAATACG
AAAAAGTGGTTGAAGATAGATTGAGACATGGGTCGGATTACGACAGCGATAGAGAACATCGTCGAGAACCTTCATATGAA
AAAAAAAAAAGCAGATCAAGAAGCCCATCCTATGACTATAGAGATAGAGATAGAGAACGGGACAGAAGGCATCATCGTAC
CCGCGAAAGAGATAGGGAAAGAGACTATCATCGTTCCAGACGTAGATCTTGGAGTAATGATAGTAGATGGGAAAGGGATG
AAAGAAAGGCTCGTGACAGAGAGAGATATCGTGACGATGATAGGGAAAGTGATAGTGAAAGAAGTCCTAACAGAGCTGTC
ATTGGAGCTAGTGGTTCAGAAATTATCGGATATAAGAGCCAACCGCCAAACAATACAATTATGATACGAGGGTTGGCTCA
ACATATTACTGAAAATGATATCAGGCAAGACATTATCCAAGGAGGGTTGATGCCAAAGGATATCAGACTAATCAGGAAAA
AAGCTACAGGTACATCACGTGGTTTTGCCTTTGTCGAGTTCGCAACACTGAATGAGGCGGTTCGTTGGATGGAGATGAAA
CAGGGTGTCCTGATGCTTCAGGACCACTACAGAGCCATCATGCAGTTCAGCATACCTAAAGACACGAATCTTATTGAAAA
ACCCCCACCCCACAAAGCGTCAGCGGATTGGTTTTGCATTAAGGCAAGTTTTGTTGTTGGGCTGCAATATCAAGAGATGT
TTCAATTGGATTTTATTTATTTCCAGTGCGGAGCGCAGAACTTTAGAAGAAGGGACAATTGCTTCAAATGTCATGCATCT
AGAACTGAATCCGAAGAAGGGGGCAGTGGTAGTGATGAGACTTGTTCATATACCACAAAAACTCTTTTGCTGAGAAACTT
GGATGCCTTAACTACTGAAGATTCCGTCATGTCAGTTTTAAATATTCTGGTTCCAGAGTTAGTCAAATCAATATCAGCAG
TTTGTATAGGCAGAGATCCTTTAACTTCAACGTCCCGCGGAATTTGCTACTTAGGTACTGAAAGCACTATTGACGCTTTG
GCGATATTCGGCGCTCTGAATGGATTGCAGAATCCACTTACTATCGATGGAAAAACTGTTATATTGTCCTATTGCAAGTA
CAACATGGGGGACACGAAGAAAGCTTACTCCCAGGCTGACCACGCCGCCTTTCCAAATGCTTCGATACCCCAGAATTATG
CAATGACCGATGTGGATAGTTTAGCTGAATATGCCGCCAGGAGATATGCGAAATCCGCGGATGAATATATGCATTACATC
GAATATTACAGAGAATATTTTACACAACAAATAAGCGCAGGAAATTCAATTACATTGCACAATGAAAATCAAATGGACTC
TGCCAATGCTGCTGCTGCCGTTGCCCAATCCGCAATCCAACAAATGCACGCAACCAAAACATACTACGACAACACTCACA
TGCAAATTCCTACCGGAACTGATGGCAAACGATACCCAATTCCTGATAGTTCGTCATATGTCTATGATAAATCAACCGGG
TACCAATATGATTCGAGTACAGGATTGTATTATGACCCCAACTCGACCTACTATTGGAACAGTGTAATTCAGAAATACCT
ATTTTGGGACAATGACAAATGCACATATTTGCTCGCCCCTTCCTACAACAGCTTTAATTCCAGTAGTACGTCAACGAGCT
CAGGCAGTTGCAATTCCGACGAAAAAGGGAAAAACCCATCTACAATCAATTCAAAGCCCTCTGTGGAAAAGCAGGATAAA
GTTAAAGTGGCTAAGAAAATCGCCAAAGATATGGAACGATGGGCAAAAACTTTAAATCAAAAGAAGGAAATTACAACCTG
TAGAAGTATATCCGAAGGCAATTTATTGTTCAACAGTGCTAGCGCAGATATAGGGTTTTCAGTATTAGAAAAAAAAGCAA
CGGTACTTGCGCCATCTGCGCCAATGTTTAAAAACGATGAAGCAGATATTCCCGAAGCTCCTAAGCCTCCATTAGTAGCT
CCATATGGCGAGAGCGAATCTTCTGGAGAAGAAGATGAAGAATCACTATTAGATTTCCGTAAATTAATCTGCAATCTTTG
CAAAAGACAACTTGGTTCGGCTGAAGCTCTTCAGAAACACGTTAAAATGTCTGCGTTACATAAACAAAACTTGGAAGCAA
GGAGAAAGAAAAAATCTGAGGACAATCCAAGCAAAATTGTATACAGGGACAGGGCAAAGGAGAGAAGAATGAAATATGGT
GATCCTGATGAACCACAGCCAAGTAAATTGAAAGAGAAGTATCTGAAAGCATTGAATACTGACATTCCAACTGCGTCGGC
GTCTGTAATGGAACCAATTGGTGCTGAAAATGTTGGAAACAAGTTGCTTCAAAAAATGGGATGGACAGAAGGCCAAGGTC
TTGGAAAGTCTAACCAAGGAAGAACGACGATTATTCAAGCCGAGCAGTATGGAAACTCCGTAGGTTTGGGCAACAAATTG
GCAGGATACACAGCTGGCGAATCATATAAAGACTGTGTAAAAAAAATGATGTATGCGAGGTATCAAGAACTTACTGAAAG
GGAGACATCCAATTGATTGCAACTTTGCAAAGAACTACTTCACAATTAAGACAACACTTTCTTTTGAAATTACTTCTTTA
AACGTGACCTTTACATTAAGAGATTTCAATTTGTATGGTACCGACCTTTATTTAATTTATTTTCAAATAATAAGTTTAAC
TTTCTTTATATATCTATTTATTAGACAATATTCAAAACAATATAGTTTTGAAATGAGGAAACTTTCTAAAATTTTGACAA
AGCTTAAAAGTATTTGCTTATTGTTTCGGGAATTAAATATAACAATAATCCAAAAAGCCCTTACATGTGCCTAAGGATCT
TAATAGTGAAAGTGTACATTGTGTTGAAAAATGGCGGATAAAACGGAATAGGAACATAAAATTTTGATAGCCATTTATTT
AAGATTTCAATTGTCAAAATGTAAATCTAAATATAAAAATATAGTTAAATTCACAAAACGTAA
PEP: 
>DPO000555-PA
MERLWYSPPRRSMSISPEPHRRNSRSKSRSPGHYTNNRKHNGYNNHIKRVNKYEKVVEDRLRHGSDYDSDREHRREPSYE
KKKSRSRSPSYDYRDRDRERDRRHHRTRERDRERDYHRSRRRSWSNDSRWERDERKARDRERYRDDDRESDSERSPNRAV
IGASGSEIIGYKSQPPNNTIMIRGLAQHITENDIRQDIIQGGLMPKDIRLIRKKATGTSRGFAFVEFATLNEAVRWMEMK
QGVLMLQDHYRAIMQFSIPKDTNLIEKPPPHKASADWFCIKASFVVGLQYQEMFQLDFIYFQCGAQNFRRRDNCFKCHAS
RTESEEGGSGSDETCSYTTKTLLLRNLDALTTEDSVMSVLNILVPELVKSISAVCIGRDPLTSTSRGICYLGTESTIDAL
AIFGALNGLQNPLTIDGKTVILSYCKYNMGDTKKAYSQADHAAFPNASIPQNYAMTDVDSLAEYAARRYAKSADEYMHYI
EYYREYFTQQISAGNSITLHNENQMDSANAAAAVAQSAIQQMHATKTYYDNTHMQIPTGTDGKRYPIPDSSSYVYDKSTG
YQYDSSTGLYYDPNSTYYWNSVIQKYLFWDNDKCTYLLAPSYNSFNSSSTSTSSGSCNSDEKGKNPSTINSKPSVEKQDK
VKVAKKIAKDMERWAKTLNQKKEITTCRSISEGNLLFNSASADIGFSVLEKKATVLAPSAPMFKNDEADIPEAPKPPLVA
PYGESESSGEEDEESLLDFRKLICNLCKRQLGSAEALQKHVKMSALHKQNLEARRKKKSEDNPSKIVYRDRAKERRMKYG
DPDEPQPSKLKEKYLKALNTDIPTASASVMEPIGAENVGNKLLQKMGWTEGQGLGKSNQGRTTIIQAEQYGNSVGLGNKL
AGYTAGESYKDCVKKMMYARYQELTERETSN
Swiss-ProtRNA-binding protein 5-A
KEGG     K13094     
SUPERFAMILYSSF54928  RNA-binding domain, RBD superfamily     
Gene3DG3DSA:4.10.1060.10     
PfamPF14259  RRM_6; RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)     
SMARTSM00360     
ProSiteProfilesPS50102  RRM; Eukaryotic RNA Recognition Motif (RRM) profile.     

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