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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO000311
PositionSeq_1098421:11871..19502[GBrowse]
sequence mRNA:
>DPO000311-RA
ATGGATGAAAGAAGAATAGCTGACTATTTCGTTGTAGCTGGTTTGCCCGAGGAACCAGAGCCTCTGGATCATACCACATT
ATCTGAGGGTGGCAACCTAAAGGCAAGTCATGGCCAAGCCCCCATTATAGATGTAAATGTATATTTCCCAAGTCTAGGCG
AAGAAGTGCCTGAAGGCTGGGTTGCCATTACAAAAACCCCTACTGGTCTTAGCGCTGACTTGAATCATGGAAGTCTACGG
ACTACTGAGTGCTTTCTGTGTGTTAAGAGAGGACGAGAGAAGCCACCACTTGTTGATCTTGGTGTTATGTATGAAGGAAA
AGAATGGCTAATGGAGGACGCGGAAGTGGTGAAAACTAGTGTGGGTGGCAATGTGGCAAATGTTAACAATTCCACATCTC
TCACTTTTATTACATTTAGAAGAGGTCTGCCCACAATGCCCTGTAACGCGCTAGTAGTAACGGACATTTGCGTGGTGATT
GCCAGCAAAGGCGAATCGCCTCCACATGCCTTCTGCTGCATAAATAAAAATTTGAATAAGGGAATGGTTGGATCTGATGT
GTTTCTATGCTATAAAAAGTCCATGAACAGGGCCAAGCTTCTGACATATAAACCCGATATTCTTGCAAGGTATCCATTAG
GAGACATTCAGGACTTTCCCTTCCCAAGTTCCATACCCCTTTTTTGCTTGCCGATGGGCGCCACTCTGGAATTGTGGCCT
CTGGAGGCGAGCAAACCCAGACCTGTTTTTAGCATGTTTGTTCTTACGGTTTCCGACGCGAAACACAAAGTGTATGGATC
AGCGCTAACGTTTTATGAAAAGTATCCCGTGGAAAATTTCACGGAGGGACAAAAGCAGCTATTGGGATATACTGAGGATG
AAGCTTTTGTTTTATATGCGAATAAGAGTATCTGCGTGTTGAGCCATTGGCCGTTTGCTGTGGACTTTCAGATGTGGTTA
CTACACTTACACCGTATGGTTACTGATGACAACCCAACGCCGGTACCAGTCGAAAGGTACATCACGCAACTGCTGGATGA
AGTCCCATTTCCGTCCCCTCGTACATTACTGCAGCTGAACGCCAGCAATCAAGACCTAAGAGTCATATTTACGCAACCTG
AAGATTTGCCGCTTCCTAGAAGCGCAGCCAGCTTCAAGCAGTTACTGCTCAGCTTGGGCTCAGAAAACTGCCTTCAGGTG
TTGCTGTTGGTGCTAACAGAGCAAAAAATCCTGATTCACTCCTTGTTGCCTGATGTGGTAACTTTGGTGGCTGAAGCTGT
AAGCTCAATGTTGTTTCCATTCAAGTGGCAGTGCCCTTACATTCCTTTGTGTCCTTTGGGTTTGGTTGAGGTCTTGCACG
CTCCCTTGCCGTTCTTGATAGGCGTTGACTCACGATTTTTTGACCTGTATGATCCGCCGCCAGACGTGAGCTGCATAGAT
TTGGATACCAATATAATCACTGTAGCTGAGGCTCAACGACAACACCTAAACACTAAACTTCTGCCAAAGAAAGCGGCAAA
GTGCCTGAAAAACACGCTGGAATATTTGTATTATCAGTACAGAAATGCTCCGATTAACACGGCAGATGCCTCCAATCCCG
ATGATATTGAAGCAGAGTTCCAAAGGAGGAAAAAGGAGCAAGCTGAGGAGCTGGAAATTCAGGAGGCGTTCCTCAAATTT
ATGGTTCACATTCTGAAGGGTTACAAGTCGTATTTGCGCCCCATAACCAAAGCGCCTACAGTGGGAACCACCGATCCTGA
TGCCTTGTTCCATTTGACGGAATTCTTGAAGAGTCGAGATAAAAGCAATGCGAAGTTTTTCAATTTACTGATGAAAACCC
AAATGTTCATCAGGTTTATAGAAGAGAGGAGTTTTGTAGTAGATCATGGCGATCAGAGCTTGACGTTCTTTGATGATTGC
GCTGAGAGATTGCAAAGCGATGAAAGTGAAATTCGACTCTTAGAGCTGGAATGTGTACATAAGAACGACCGCACTGTTTT
CGTGTTGCCGCCAGAGCCTGTAAATGATTCCGATTCTTATACATATTCCCAGTTTATTTTAAATCCCGTTCTATTGCTAA
GTGGTAAACGACGAAACCGATTGGCTTCGCTCTACCAAACGGGTATTCCGAGCTCGCCGATGGCGCGAAGAACCAAGCAT
GAAATCAAAAGCGCCCAAAAATTGGCACGGAAATATCAAAGGCTGCCCGATACTTGGGCGAAATGCTTATGTGGCACTTG
CCACACACTTTATTTTATGACATTGCCAAGTATGCTCAGTTTAAACATTGGCAAAGAGAACAAAATCCTGCAACATGCTT
ATGAGCTATTAGTGAGAGCGACTTATTTCAAACTGCCCTGTGATGAAGTGTGCTATAGACTGATGATGCAATTATGTGGC
GAACATAACCGACCTCTTTTGGCTGTGAAACTGTTAGTTTTAATGAAAAAGTTTGGCATTCAACCGAACGCTTTAACTTA
TGGACTATATAATCGATGTGTTTTGGAAGCCCAATGGCCTGCTCACGCGGATTCCAGTCAGGTGCTATGGAATAAGCTGC
GAAACGTCGTGATTGGAGCCGCGCACTTCAAATTTGCGGCCAAGAGAAAAGCTCAACGAAATTATCTAAGCGCATCAACT
GAAGGAGGTTCGAGTCTACTCGATCCTACAGACCGAAGTGCCTCAAGAAGTTCCTTGGATTCTCACGAAGGTAACACCAC
GGAAGGCAGTCTCTTAGACAAGTTTAGGCGAGTGGCAAACAGCATAGTGAAAGGCAGTGTGAAAGAACTGGTTGAAACTG
AAGAGCCAGATGGTGCTGTAGCGGATGCAAGTGAGGAGAACTTGGAGCAAAGTCTTTTTGTGCAAAACAGTCCGTCCGAA
TGTAGACTGCTGTCGAGATCCGAAAGTGGCGGCGATGCAAACTTAATCGATAAGCTTCAAAGTACCACGAAAAAAGCCTG
CTCAAGAAACTTGCACTTTGACCCCAACCTGAACGGAGATGCGATTGCCGAGAACGATAAAAACTCTCCCACTAAGGTTT
CACCTAGAGAGTTGATAACGGAAAACGACCCGCTAGGCGCCTTTCAGCCACCACTAGAGGAAGTGTCTGAAACCCAAGCC
AAAGAAAACGATTCTGTCCCCGAAACCCAAACAAATCCCGTCCTCACCGATGAACCTGTGTTGTTTCGAAATTCCGTCCA
TCGATCTGCAACGTTCGAAGGAAGCCCGCCATCGCAGAATAAATTGCATCGCTCCGAAACAGTGCCGGCAGCAACAGTCG
CTTCCAGTCTCGCAAGTCTTGGCTCCAGCTTTAAACTTACCTTCAGCCGTTACGCCACTCAAAGAATATCCTTAAGAAAA
GCCAACCTTAAGGTGCCTCAGCAATTTATCGAAAATGCCATAACCAACCTAAGTCCTTCAAGTTTGACTGGCAAAAAGTC
CAACGAATTGATACAGGGCTCGTTGAGCACCATTAAATCAGCTGCCAATACCATGGTGAAGAAAATGGAGGAAATCAAAG
AGGCGATTTCCACTTCAGCAACATCCACTCCGGTCAAGGCTTTAACCTCGGGCGATAGAATGGCTTCTGGGGACGCGTTG
AATGATATTGATGGAGACAGTGCTCAAGGAAGCGAAGAAGGAGAACGAGTGCGCAAAGTTTCAGTGGAAATGGGCAGCTA
TCGAGGCTCGTGCACCAACTTGAAAGACTACGAAGAGCCTTTGCCTGAAAGCTTGTATCCAACGCCAGAAGAAGCTAAGG
CGGAAAGTGACGTTGATATCACTCTCACCACTTGCTCTCAGTGCCACAACTGCAATCGCTTGCTATACGACGAGGACATA
ATGGCCAATTGGTCGGCGGAAGATTCCAACTTGAACACTCTCTGCCACGCATGCGGAAAGCCCACAGTTCCTCTCCTCAC
GGTGACGATATCCGGGCGAGAAATGCGAAACTGCGATCCTTTCAGTGTTCCTTACCTAAATCCCTTAGTTTTACGCAAAG
AGCTGGAGAACATTTTGGCTCGCGAGGGCGATTTGAGCTCCGGCAACTGTTTCCAAAGTGTTGCAGACTCGAAATTCATC
GACGAGCATCCCATCATCTACTGGAACCTGATATGGACCTTCGAGCGAATCAACATACAAACGCACCTGCCGAATTTGTA
CTTTAAACATCGGGTTGATGTGCAAACCAACTCCAGCAAAGCGAATGGCAAAGCGGACTTGAAGGAGGAAGATGATGATA
AGCAGGATGGTGGAAGTAGCATGCGATTGGTTGAAGAGGGCACTGATCCTTTGACGCAGGAATTGGCGGTTATAGGCAAA
GTGAAATGCGTCTGGGACGAACCGAAATTCCACTCGGAAGGCCCTCCGATGTACATCCTATGGAGGTTACGAGACAGCAA
TCAAATAATTTCGATGGACAGAAGCAAAGTGACCAAATCATTCATGCAACAAATTATTAACTATATTCGTGTGAATGATC
TGGCGGAGCCAATCAAAAGCCTCACATACGAGAGGGAACAGCTGTCCAAAAAAATCGCTTACTCCATTTATCGGGACATC
TTGTTTTTGGCCTGCAAAGTGTTGGGAAGAGCTCAGATCGATATAAATGCCTTCGATAAAGAGTACACCATGGCCTATTC
ACGTTATTGTGAGCGGGCCGCTTTGGAAGTTCAAGATAAACCAATCAGCCTGAGTGCGTTATATTGCAGACAATATTTTC
GGCCTTTGTTGCTTCCCTAG
PEP:
>DPO000311-PA
MDERRIADYFVVAGLPEEPEPLDHTTLSEGGNLKASHGQAPIIDVNVYFPSLGEEVPEGWVAITKTPTGLSADLNHGSLR
TTECFLCVKRGREKPPLVDLGVMYEGKEWLMEDAEVVKTSVGGNVANVNNSTSLTFITFRRGLPTMPCNALVVTDICVVI
ASKGESPPHAFCCINKNLNKGMVGSDVFLCYKKSMNRAKLLTYKPDILARYPLGDIQDFPFPSSIPLFCLPMGATLELWP
LEASKPRPVFSMFVLTVSDAKHKVYGSALTFYEKYPVENFTEGQKQLLGYTEDEAFVLYANKSICVLSHWPFAVDFQMWL
LHLHRMVTDDNPTPVPVERYITQLLDEVPFPSPRTLLQLNASNQDLRVIFTQPEDLPLPRSAASFKQLLLSLGSENCLQV
LLLVLTEQKILIHSLLPDVVTLVAEAVSSMLFPFKWQCPYIPLCPLGLVEVLHAPLPFLIGVDSRFFDLYDPPPDVSCID
LDTNIITVAEAQRQHLNTKLLPKKAAKCLKNTLEYLYYQYRNAPINTADASNPDDIEAEFQRRKKEQAEELEIQEAFLKF
MVHILKGYKSYLRPITKAPTVGTTDPDALFHLTEFLKSRDKSNAKFFNLLMKTQMFIRFIEERSFVVDHGDQSLTFFDDC
AERLQSDESEIRLLELECVHKNDRTVFVLPPEPVNDSDSYTYSQFILNPVLLLSGKRRNRLASLYQTGIPSSPMARRTKH
EIKSAQKLARKYQRLPDTWAKCLCGTCHTLYFMTLPSMLSLNIGKENKILQHAYELLVRATYFKLPCDEVCYRLMMQLCG
EHNRPLLAVKLLVLMKKFGIQPNALTYGLYNRCVLEAQWPAHADSSQVLWNKLRNVVIGAAHFKFAAKRKAQRNYLSAST
EGGSSLLDPTDRSASRSSLDSHEGNTTEGSLLDKFRRVANSIVKGSVKELVETEEPDGAVADASEENLEQSLFVQNSPSE
CRLLSRSESGGDANLIDKLQSTTKKACSRNLHFDPNLNGDAIAENDKNSPTKVSPRELITENDPLGAFQPPLEEVSETQA
KENDSVPETQTNPVLTDEPVLFRNSVHRSATFEGSPPSQNKLHRSETVPAATVASSLASLGSSFKLTFSRYATQRISLRK
ANLKVPQQFIENAITNLSPSSLTGKKSNELIQGSLSTIKSAANTMVKKMEEIKEAISTSATSTPVKALTSGDRMASGDAL
NDIDGDSAQGSEEGERVRKVSVEMGSYRGSCTNLKDYEEPLPESLYPTPEEAKAESDVDITLTTCSQCHNCNRLLYDEDI
MANWSAEDSNLNTLCHACGKPTVPLLTVTISGREMRNCDPFSVPYLNPLVLRKELENILAREGDLSSGNCFQSVADSKFI
DEHPIIYWNLIWTFERINIQTHLPNLYFKHRVDVQTNSSKANGKADLKEEDDDKQDGGSSMRLVEEGTDPLTQELAVIGK
VKCVWDEPKFHSEGPPMYILWRLRDSNQIISMDRSKVTKSFMQQIINYIRVNDLAEPIKSLTYEREQLSKKIAYSIYRDI
LFLACKVLGRAQIDINAFDKEYTMAYSRYCERAALEVQDKPISLSALYCRQYFRPLLLP
Swiss-ProtC-myc promoter-binding protein
PfamPF03456  uDENN; uDENN domain     
SMARTSM00801     
ProSiteProfilesPS51375  PPR; Pentatricopeptide (PPR) repeat profile.     
CoilsCoil
TIGRFAMTIGR00756     

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