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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO000259
PositionSeq_1097262:5920..10166[GBrowse]
sequence mRNA: 
>DPO000259-RA
ATGAATGGATTTCCCAGGAACTACAGTAAAGATAAAAAACGCTCAGTTGATGATCAGCGATTTGATAATGTTTTTTATGG
TATACCATATGATGAAGAAGAGACATCCACAGTGGCATTTTGTAACAATAAGCCATTAGGGCAGTCTTCAACCCCACCAG
GCTTTCAGAAGCAAGGAAAAGAAGCCAGGAAAAGGATTATCAATAAAGAGAATATAAAGGACTCTTCTTTTACACTTCGA
AAAATTTTAGAGACGACTTCGAAATCAAGTTCATCACAGAGAAATAAACTTTCAAAATCTTGCGCGTCCAAGAAACGCAA
ACTCTCAGACGTGATGGATGATTATCAAGAAGAGCAAGTGTACCATGCAACAAATGGGGATATCATGTTAGACTACAATG
TGGCTACTTTACTCAACATGGGAAACACCTGTTTTTTGAACAGTGTGCTTTATGCGTTGAGATTTACTCCTACGTTTCTA
CACAATTTGCATCATCTCCTATTGGACTTGAATTCAATTAACAGTAAACTCAAGGAAACCAAAACGAAAACAAGCAGCTT
GGGTAGAAATGGAAGCGCCGTGAGCGGTAGTAGTTGGCGTAGTGCCAGCAGCAAAGACCTGTTATCCATAGGAAATGATA
TTATTCCGAAGTGCAAAGAGCAAGTGGTCACTGAAAAACTGCATGGGTTGTTTGTGATTATGAATAATTTGGAATCTAAA
GGATCTTTTGATCCTTATCAGCCGGAGGCATTGATGCAGGCAATGAGAGATGCCAACCCCTTATTCGAAGGCAATCATCA
GCAGGACGCCCATGAATTTTTTGTAGAAATGCTGAGTTGTTTAAGAATCACATGTGATCGGCTTAGTGAACAAATAGAAC
AAAATCCGGATCTAATCAAACCGCCTGAATCCACTACCAATGGCAATAACGGCAGTAAAAAATGGAATCCAGTTAGGCGT
TCCTGGAAAAAGCAGCTAAAGAAGAAAGAAAAACTGGTCGTTAAAAATAACGGCACGATGGAAAATGCCATCGAGCCCAA
GGTTCAATCTGTTATTATGATTTTAGATATTGCAGCTGACGAGTCGGAAGACGGTTTGAGCCCATCTAGTAACGGTTGCG
GTGATGCAACGAAGAGGAAATTTGGATATAATTTTATTGCCGAAGAGTTTCTGGGTGTCTCGTTGCATCGCACAAAGTGT
CTGGAGTGTGAAGGAGTTAGCGAGCTAAAGGAACCGTTTTTAGAAATTCAGGTACCTGTTCATGGTAAGGATGAAGCCGA
AGAATCCAATTATAATGATAGCAACATTTTTGGAAGCTTATGCGTTACTTCTGAAAAATTGTGCGATCAAAATAAGTATT
ATTGCGAGATTTGTAATCGATATAACGAAGCACAGCGAACCATTCTTTATGAGAAACTGCCAAATGTTTTGGTGCTTCAC
TTGAAGCGTTTCACCACTACACTATCTGGCATTCAAAAGGTCAATACCTACGTACCTACACCTCTAGAAATTAAATGTTT
TTGTGAAACTTGCGCCAAAGTTGAAAATACCAAAACTACGCCCCACAGGTACCAACTCAGCTGTGTAATTATGCATTTGG
GAGCCAGTATGGCATCAGGACATTATATTGCTTATTCAAGAGCTTCGGTTGAAACTTCCGACTACGTCGAATGCAGTAGG
GATACTCCAAAAAGTTATCTAACATCCAGTAGTAAAGAAATGAACTTCTTGAGAATGCTCAAAGCTAAAGCTTTGGGAAA
CTCGTTGAGTGAAACCGACAATGGATTCACACTTAATTCTAAAAAACAAGATACCCAAGTTTGTCAGAGTATCAACTGTT
GCGGCATTAAATGCAAATTAAACTTGTGTTCACCTGGTTCAAGTCAAGACTGGCTCGAATTTGACGATGAAAAAGTGAAA
ATACTTTCAAGTAAAGAATTCATCGAAATGCTGAATAAAATGCACGAAAGCACAAACACGCCATATTTACTGTTCTATTC
CAAAGTATTATAG
PEP: 
>DPO000259-PA
MNGFPRNYSKDKKRSVDDQRFDNVFYGIPYDEEETSTVAFCNNKPLGQSSTPPGFQKQGKEARKRIINKENIKDSSFTLR
KILETTSKSSSSQRNKLSKSCASKKRKLSDVMDDYQEEQVYHATNGDIMLDYNVATLLNMGNTCFLNSVLYALRFTPTFL
HNLHHLLLDLNSINSKLKETKTKTSSLGRNGSAVSGSSWRSASSKDLLSIGNDIIPKCKEQVVTEKLHGLFVIMNNLESK
GSFDPYQPEALMQAMRDANPLFEGNHQQDAHEFFVEMLSCLRITCDRLSEQIEQNPDLIKPPESTTNGNNGSKKWNPVRR
SWKKQLKKKEKLVVKNNGTMENAIEPKVQSVIMILDIAADESEDGLSPSSNGCGDATKRKFGYNFIAEEFLGVSLHRTKC
LECEGVSELKEPFLEIQVPVHGKDEAEESNYNDSNIFGSLCVTSEKLCDQNKYYCEICNRYNEAQRTILYEKLPNVLVLH
LKRFTTTLSGIQKVNTYVPTPLEIKCFCETCAKVENTKTTPHRYQLSCVIMHLGASMASGHYIAYSRASVETSDYVECSR
DTPKSYLTSSSKEMNFLRMLKAKALGNSLSETDNGFTLNSKKQDTQVCQSINCCGIKCKLNLCSPGSSQDWLEFDDEKVK
ILSSKEFIEMLNKMHESTNTPYLLFYSKVL
Swiss-ProtUbiquitin carboxyl-terminal hydrolase 1
KEGG     K11832  USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]     
SUPERFAMILYSSF54001  Cysteine proteinases superfamily     
Gene3DG3DSA:2.20.210.10     
PfamPF00443  UCH; Ubiquitin carboxyl-terminal hydrolase     
ProSiteProfilesPS50235  USP_3; Ubiquitin specific protease (USP) domain profile.     
ProSitePatternsPS00973  USP_2; Ubiquitin specific protease (USP) domain signature 2.     

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