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Gene detail [Fasta]

Species Dendroctonus ponderosae
GeneDPO000223
PositionSeq_1102977:467398..475825[GBrowse]
sequence mRNA:
>DPO000223-RA
GGCGCTGCATTCGAGTTTCCATCCTTTCTGTTTGCAAATCGTGCCAAGATGGTGAGTTGTATTGAATAAAATCCCCTTAA
ATTTCAAACATCTTGCTGCAAATTCCACGTTTAGCTCGGTGGCTTTATCAATAAAACTCCCGTTAACCTGACAATGTTAA
TATCAGGACTGATTTCTTTTTAGGGTATCGACATTAACCATAAATACGATCGGAAAGTTCGGCGTACGGCCCCCAAGAGC
CAAGATGTCTATCTACGTCTCCTGGTTAAAGTAAGTGGATTCAGGAAACATTCAAGACAATCTTCTAGAAAAAGTGCGCT
CGTTTTTTAGCTCTATCGGTATTTGGCTCGTCGTACCGGAGCGAAGTTCAACAAAATCGTCCTGAATCGCTTGTTTATGA
GCCGAATTAACCGGCCTCCACTGTCGCTGGCCAAATTGGTCCGCCACATGAAAAAGCCCGGCCGTGAAGGACTAACGGCA
GTTGTTGTGGGCACTGTAACTGACGATTCGAGGATCGTCAACCTGGGGTCGAACAAGGAGTTCCCCAAGCTGTCTTTGTG
TGCTTTAAGGGTAACGGAGAAGGCCCGTGCTAGAGTGCTGAAAGCTGGTAAGTCTTTTAAACAATTGCTTGGTTAGACTG
GACGCTGCATGCAAATGTTTCAATGCTGTGATCGAGTAACACGTTTTTGGCCAGGTGTTCATATGCACCTTGTCTCGTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCTTTTTAATTTTTCCTTAAGGGTCCTATACATTTCAGCAG
TTTCAGTTTAAAAAATAATGCCGATTGTCTAAATATGCCGGAAAATCACTTTCAACTTCTTTGGGAAAGTTATGTTTTAA
CGACCCAGTATTGCCATTAAAAATGAGGTTGCCCAGGGCTGTTTAATGTTGTGAATGTTAATGAATCTTGTTTTAAGGAC
TACAATCCATAGTTCGACCCATGAATGTTAAAATTAGTCCTCGTTACCTGCGTATCTTTTAAAGAGGAGTTTTACCTTAG
CAGGACTAAAGTTTCGCAACAAATGTTTCTCGCTTTTAAAGGAAAATTGAAATGAAGAAAAGCGAATCAACACGTAAATT
ACTTCAGCATCTTTTCTAAATGTCGATGTTGATTTTTCAATTTGAGAGTTGTAATTCGACTCTCGCGCCTTCTTCAGCTC
CATTACGATGAACTAATGCGGGAGCTTCGAGATCCATTAAAAAAACGCTCTGAACCAATTTGCCTCTTTTACAGTAGCGA
AATTCGATACTGCGTAGTTGTTACAAGCGCCCCCTTTTTTAAGTGCTGAATCCGATTTCGCAGCTTTTAAGAAGGTATGT
GCGTTTGAATTAAATTTGCCCACACTAGCAGGCCATCGGGTTTCGATGTTATGATGAATCTTGCATCAGATTTTCTTTAT
GAAAACATGTTGTCTAAACAAGTGGACGTAATTCTGAAACAACACGCAAACCGCATTAATTTCAGCCGCTCGATTGTCGT
CGTTTAACGCTTTGCTATTGGTTTTTAGGTGGCGAAGTCATCACATTCGATCAACTGGCATTGAAGGCCCCAACCGGTAC
CAAAACCGTTCTTCTGCAAGGACGCCGCACTGCCCGAGAGGCGAACAGGCACTTCGGTCCTGCTCCTGGTGTGCCCCACA
GCCACACGAAGCCGTTTGTCCGTTCAAAGGGACGCAAATTCGAAAGGGCTCGTGGTCGCAGGAAGTCATGTGGCTACAAG
AAGTAGATCATTTTTTGGGCTGCTTGTGCAACTGGTGCGCAACAGCACTAGTTTACTACTGGTGGGTGTAAAGGACTCTA
TTGCGGCGCAACATAGTCCTAAGTACCCTTTTAAAGCTAGTAAAGAAAATAATAAACAAAGGAAGTTACAGTTACGTTTA
ATTTTTCCTTTTCCTTTGCGTTTATTTCAATGTTTCGGAAGTATTCGATATACGAAAAAACGAAGGTAAGACTGCACGCC
AACGTTGCCACTTGTAGGGGCTCTTATGTCGTTTTCAGTTGAGAGCTTTGTAAACATTGCTGACGTGTGTGTCAAATGCA
AATCTGCGGTGGGTTTTAAAAGTGGTTTTCTTTATTCGGTGGTTAAAAATGGTTCAGAAAGTGAAAATCAACATCAAGTC
GAGGATTTCGGATGATCAACTCGACCTGAGCATGTCCGATTTGGACGAAGTCCCAATAAAAGAAATCGTAAGCAAACTAA
CCCAGCCACATACCTACCTACCAATCTGTTGGTCATTTCAGGCTGCTTTGAGGAAGATCCACAGCTTGGACTTGTCGAAC
AATCGCTTAACTAGTCTGCCGGTGAGTTTCCTGCCTCTTCCTATTGAAAATTTCCCCGAAACTACTGGCATTTTTGCAGA
GTGCCTTTGCAAGTCTAACATTCCTGACAAAACTGCATCTGAGCGAAAACGGGCTCACTGAACTGCCAGAGGATTTCGGA
AGTCTGTGCAAGCTCCGATACTTAGACCTGTACAAAAACAAATTGGAAAGACTGCCTTTGAGCTTCAGCCAACTGGTTGG
CTTGAAGTTCCTCGACTTAAAGGACAACCCTCTCATCCCAACTATTGCCAAAGTAGCCGGTCCTTGCGTCGACAATAAAG
GGTGAGACACATTTACGTGCGAACTAGCCCTAGGAAGTTTTTGGGTCATTTTTAAGGTGCCAACAATGCGCCAAGGATGT
GGTACATTTCTTCAAACAGCTGGAGCAAGAGGTGGAGTCGCGTAAGCAGGTCAGACAGAAACTGCTGGAAATCAACCAGC
AGGAGAAACAGGCAGAGAAGAAAAGGCTGAAGAAAGAGCGACAAAGCAAGACAGCAATTAAGGAGGTTCAAGTGGTGAAA
AACAGCACAGCAGCTGAAGTGCCTCAGTTGGTTCCAGCTAATAGCAAAAAGCCTTTGGAGCCTCTTGCAGGTTCAGCAAA
AAGCCCGTTGTTTTCCTGGTTTGTCTATTCGATTTTTCTGCTGCTGGTGCTGCTGTGGTTCTTGTTCTCTTGGAGGGTGT
CGTTGGCGCAAAGTTTAGCACCTAAAATCGGCGAGGTTTATGAAAACCTCCTGGACCAGTTGCCTAGTAATTATAGGGCG
TTAGCCCAGTCTTTTGGGGATTCAATCATAGCCCTACAGGTGGGCACACGGAACATATCAAGGCAGTGTGCAGATGTTGT
GTACAACAGTGAAATAGTGCAGACTGTGTTGATTAAAGTGTACAATTTAATTGGGAAGAACACTAGTTAGTCCCCTAGTG
CAAGGGCGAATAAATGCTTTAACTACTTGTTGCTCCAAACGAGCAGTGTTGATGGAGTTTTCCCCCATTTCCTATTGCGT
ATCGATCAAACTTTCTTAGGTGGTTCAAAAACAGGCACAAAATGTCGCACAAATACTATGACGAGCAGTTTTGCGAAATT
CAAGACTGTCTTGTTGCCACCCTTAATTCGGAACCAGCTCAGGCCGATAGAAGGGAAAACAGACAGCTACTTGCCGGCCT
GTACGTGCGCTATATTACGATTGCCAATAAGTTGGGAACCTGCGTGGATCAGATGGTGCAACCCCAGAAAAGACTGTTGC
TCAGAAAACTGCTCGAAGCAACTCTGGGGAGGATTTTGGAGCTGAAGACTGACTTGGTGGAAGCGGATCTTAGCGAGTGG
ACGCACTGCGGGGATATCTTGGAAGATCTACGTATCACCCCCAATGACTCTGAACTTGAAATTCCTGCGTGCTTCCGAAG
GGAGAGGGAGCAGGAGATCAACTGCAGAAAAGGGGTCATTGACGACGTACTAAACAAGCTGGGGTTTACCGACGAAGTGG
ATGAGCGGCTGCCAATGAGCGAGCAACAAGCTATTCTGGTCATTCAAACTCATGAGCGGGCCAGACAGGGGCGACTACGG
GCGCAATTCATGAAAGAGATCCGAAGCATGAAGGACAAGAACAAGCCGGTGGTGACGGGGATGATTCCGCCGCCCAAAAA
GAGAAATGAAGAAATTGAGAAAGACCTGGAAAATCAAGAGCGACGGAGGCAATTGCAAATTCAACGACAAGAGGAGTATT
CGCAGGATATTAAGAAGATTAGGAGTCATTTGGAGAAGACCCAAAGAGGTCCTGTTCTGGAACAGCTCAGTGACCAGGTG
CGGAACTGGTTTCACGAGTTTAAAGCCCAAACTGGCACAATTCCTGAATATACCGGCTCTGAGCGCAGTGCCTCTAGACA
AATGCCTAGCAGACAAGGAACAGACAGTGAAACCAGTAAATCGACTCCTGGCTCTTCAAAAGAGTCCAAAATGACGAAAA
CGAGAGCCTCAAAAAGTGGCAAAGAACCAAAGGCTGCTGAGGATGTGGAGGACGAGGAAGACTGGCGGTGTAAGGCAATC
GTTTCTACTTTTGCGCCGGAGTTAAATGTGCGGAAAGAAGAGTACGAAGAATGGTGGAGGAACAAGGACGAGTCCTCGAA
TCCAAGGCAGCATCATTACAAGCACATCATCGAGCATGAGCAAATGACCGAAATGGAGAATGAGCTAAGGAAAGTTGTTG
ATGAAATGATGAAGGCAGAGCTGATGCTGCTCCAGGATGCTTTCGACAAAGATAGGGGCCATAAAAGTAAGAAAAAGTCG
AGTAAAAAATCGCGAAAAGCCATGAAAAAGGGCAAGAAGAAGAAGGAGAAAGATTTGACGCCAGACCGAACGACGCAGTC
TTTGTTTGAGGAGTTGGTGGCTAACGGCATTATTAAACGATACCCCGAAGTGTGGATGCAAGACTTCAGAGGAGAACGAT
CGTTCCATCCGCCAGCAGCTCACAATAGAGGCAAAGAGCCGCCTTTCGATCTCGGAGATATTCGTCAAGTTTTAACCGAG
TACTGTGTAGTCCCACTGCTGTCTGCGCGACTGCACCGCAATACGCCCCCTATAAAGTCGGTTTTATTGGCTGGACCGAA
AGGCTCCGGCAAAGACATGCTGCTTCACGCAATTTGCAACGAAATTGGAGCGGTTTTATTTGATCTCACTCCGGCCAACA
TTGTTGGGAAATATCCAGGAAAATCCGGCCTAATCATGCTAATCCATCTGGTGGTCAAAGTGTCGCGGTTGCTGCAGCCT
TCGGTTATTTACATGGATAATGCCGAGCGGCCTTTTGTGAAAAAGGTCCCGAAAACTGATCGCACCGACCCAAAGCGACT
GAAGAAGGATTTGCCCAAAATGGTGAAAAATTTTGGGACCGAAGATCGTGTTATTTTAATAGGGGCAACCAATTGCCCGT
GGGAAAGTGACCAGAAGCTGTTGCAGCAGGTTTACCAAAAGTTCCTGATCATTCCCCGGCCCAAATACAGTTCAAGGTAC
GCTAGCAGTAGAATTTTGGCAGCGTTTGGCCGCGATACACCCAACGATAGAATAAAATACGCAATTTGGACTCACCTCCT
GAACCGGCATATGCCAGTGAGTTGGAAGTTCGATACCAGTGTAGTCAGCAAGATTTCCGACGGATACACTGTTGGCTCCA
TAGTGAGTACAGTGAAGGAAGTGATCACCGTGAAAAGAATGTTGCAGCTGAGGATTCACCCTCTCAGTCCCCTAGAACTG
GAGGATGAAGCTTTGGAGTTGTGGTGGAGCAAAGTTCCGATGGTGCGAAGAAGACTGAGAGCCGTCGAAATGCTGATCGA
AGAGGAGGAGGAAATGATGGCTAAGCAAGCGAACGCAAAAAAGAAATAGCTTGAGTCGGTGAGTAGGAATGTTATTTATT
TTGAAACAGTTCTGAACTCATCGCGATATTTTCAGGTATACTGACTCCTCGCAGCGCTCGCCATCACAACATGATAAATA
TAAATGCATAATCATTGATCATACTAATAAAAATATACAAAAAAAACAATCGATATGATAAAATAAGCTTATATATAATA
AACGTTCATATCCAGAGACA
PEP:
>DPO000223-PA
MSHKYYDEQFCEIQDCLVATLNSEPAQADRRENRQLLAGLYVRYITIANKLGTCVDQMVQPQKRLLLRKLLEATLGRILE
LKTDLVEADLSEWTHCGDILEDLRITPNDSELEIPACFRREREQEINCRKGVIDDVLNKLGFTDEVDERLPMSEQQAILV
IQTHERARQGRLRAQFMKEIRSMKDKNKPVVTGMIPPPKKRNEEIEKDLENQERRRQLQIQRQEEYSQDIKKIRSHLEKT
QRGPVLEQLSDQVRNWFHEFKAQTGTIPEYTGSERSASRQMPSRQGTDSETSKSTPGSSKESKMTKTRASKSGKEPKAAE
DVEDEEDWRCKAIVSTFAPELNVRKEEYEEWWRNKDESSNPRQHHYKHIIEHEQMTEMENELRKVVDEMMKAELMLLQDA
FDKDRGHKSKKKSSKKSRKAMKKGKKKKEKDLTPDRTTQSLFEELVANGIIKRYPEVWMQDFRGERSFHPPAAHNRGKEP
PFDLGDIRQVLTEYCVVPLLSARLHRNTPPIKSVLLAGPKGSGKDMLLHAICNEIGAVLFDLTPANIVGKYPGKSGLIML
IHLVVKVSRLLQPSVIYMDNAERPFVKKVPKTDRTDPKRLKKDLPKMVKNFGTEDRVILIGATNCPWESDQKLLQQVYQK
FLIIPRPKYSSRYASSRILAAFGRDTPNDRIKYAIWTHLLNRHMPVSWKFDTSVVSKISDGYTVGSIVSTVKEVITVKRM
LQLRIHPLSPLELEDEALELWWSKVPMVRRRLRAVEMLIEEEEEMMAKQANAKKK
Swiss-ProtIQ and AAA domain-containing protein 1
SUPERFAMILYSSF52540  P-loop containing nucleoside triphosphate hydrolases superfamily     
Gene3DG3DSA:3.40.50.300     
PfamPF00004  AAA; ATPase family associated with various cellular activities (AAA)     
CoilsCoil

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