The codling moth, Cydia pomonella (Lepidoptera, Tortricidae), is a wide-spread and highly impactful pest of pome fruits (apple and pear) and walnut. We sequenced the genome of this pest by using a combined strategy of Illunima HiSeq2000, PacBio, BioNano and HiC scaffolding, we identified 27 autosome, Z and W chromosome. The gene annotation was carried out using the OMIGA pipeline. Please feel free to contact us for any question: Professor Fei Li, lifei18@zju.edu.cn.
Data source
- Cydia pomonella genome assembly files
- Cydia pomonella genome contigs v1 [HTTP]
- Cydia pomonella genome scaffolds v1[HTTP]
- Cydia pomonella genome chromosomes v1[HTTP]
- Cydia pomonella genome annotation files
- Cydia pomonella repeat sequences[HTTP]
- Cydia pomonella ncRNA sequences[HTTP]
- Cydia pomonella OGS[GFF3] v1[HTTP]
- Cydia pomonella OGS[CDS] v1[HTTP]
- Cydia pomonella OGS[PEP] v1[HTTP]
- Cydia pomonella transcriptome sequencing data
- Cydia pomonella Egg of 1 day RNA-Seq: [Left | right]
- Cydia pomonella Egg of 4 day RNA-Seq: [Left | right]
- Cydia pomonella Mix egg from different days RNA-Seq: [Left | right]
- Cydia pomonella 5 star larva RNA-Seq: [Left | right]
- Cydia pomonella Larva of male RNA-Seq: [Left | right]
- Cydia pomonella Pupa of female RNA-Seq: [Left | right]
- Cydia pomonella Adult of female RNA-Seq: [Left | right]
- Cydia pomonella Female adult after hot treatment RNA-Seq: [Left | right]
- Cydia pomonella Abdomen of female adult RNA-Seq: [Left | right]
- Cydia pomonella Abdomen of male adult RNA-Seq: [Left | right]
- Cydia pomonella genome resequencing data
- Cydia pomonella Susceptible (from INRA) 3 female and 3 male larva individuals resequencing: [F: Left | Right] [F: Left | Right] [F: Left | Right] [M: Left | Right] [M: Left | Right] [M: Left | Right]
- Cydia pomonella Resistance to deltamethrin (from INRA) 6 larva individuals resequencing: [Left | Right] [Left | Right] [Left | Right] [Left | Right] [Left | Right] [Left | Right]
- Cydia pomonella Resistance to Azinphos methyl (from INRA) 3 female and 3 male larva individuals resequencing: [F: Left | Right] [F: Left | Right] [F: Left | Right] [M: Left | Right] [M: Left | Right] [M: Left | Right]
- Cydia pomonella others data
