Genome Module
UpdatedComplete genome assemblies, annotations, and comparative genomics data
Module Overview
The Genome module provides comprehensive access to insect genome assemblies through an intuitive search and filtering interface. This module serves as the central hub for exploring genome data, quality metrics, and related research information.
Key Features
- 1Quickly filter target insect genomes based on taxonomic classification
- 2Click on insect species names to view detailed genome information
- 3Search for specific insect genomes using classification and name keywords
Genome Basic Information
Each genome entry provides comprehensive basic information including species details, genome statistics, and annotation data.
Information Sections
- 4Species introduction and basic genome statistical information
- 5Basic genome annotation information including gene counts and functional categories
Genome Quality Assessment
Comprehensive quality evaluation of genome assemblies and annotations with both absolute and relative quality rankings.
Quality Metrics
- 6Genome quality assessment provided by BUSCO analysis
- 7Genome annotation quality assessment provided by Omark analysis
- 8Quality rankings within the database for intuitive understanding of absolute and relative quality
Download and Publications
Access genome data downloads and related research publications for comprehensive research support.
Additional Resources
- 9Genome download module for accessing sequence data and annotations
- 10Related publications module for accessing research papers and references
Search Tips for Optimal Results
Basic Search
- Use species names or common names for direct searches
- Filter by taxonomic order to narrow down results
- Use partial matches for broader search results
Quality Assessment
- Check BUSCO scores for genome completeness
- Review Omark scores for annotation quality
- Compare quality rankings across similar species
Available Data Types
Genome Sequences
FASTA format
Gene Annotations
GFF3/GTF format
Quality Metrics
BUSCO/Omark scores
Publications
Research references