Gene Family Module
Gene family analysis and classification for functional genomics research
Module Overview
The Gene Family module provides comprehensive access to gene family classification and analysis through an intuitive interface. This module serves as the central hub for exploring functional gene groups, evolutionary relationships, and comparative genomics.
Key Features
- 1Browse and search gene families organized by functional categories such as metabolism, signaling, and development
- 2Access comprehensive gene family databases with detailed functional annotations and evolutionary classifications
- 3Perform comparative analysis across species to understand gene family evolution and functional conservation
Gene Family Detail Analysis
Each gene family detail page provides comprehensive analysis tools and detailed information about family members across different species.
Analysis Features
- 4Filter gene family members based on specific species to focus on target organisms
- 5View detailed functional descriptions and annotations for each gene family member
- 6Click on gene IDs to navigate to detailed gene information pages for comprehensive analysis
Gene Family Categories
Metabolism & Energy
Enzymes and proteins involved in metabolic pathways and energy production
Signaling & Receptors
Signal transduction proteins and receptor molecules
Development & Morphogenesis
Proteins involved in developmental processes and morphogenesis
Neural Function
Neural development, function, and synaptic proteins
Immunity
Immune system proteins and antimicrobial peptides
Gene Regulation
Transcription factors and regulatory proteins
Search and Analysis Tips
Family Selection
- Browse families by functional category for systematic exploration
- Use family names to search for specific protein families
- Check family member counts to understand gene family size
Species Analysis
- Select target species from the organism dropdown
- Compare gene family members across different species
- Click gene IDs to access detailed gene information
Usage Examples
Example 1: Exploring Cytochrome P450 Family
- Navigate to “Metabolism & Energy” category
- Click on “Cytochrome P450” family
- Select “Drosophila melanogaster” from organism dropdown
- Review functional descriptions and click gene IDs for details
Example 2: Comparative Analysis
- Select a gene family of interest
- Compare family members across multiple species
- Analyze functional conservation and divergence
- Access detailed gene information for specific members
Available Data Types
Gene Families
Functional classifications
Annotations
Functional descriptions
Gene Lists
Family members
Gene Details
Individual gene info