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Gene detail [Fasta]

Species Aedes aegypti
GeneAAEL008647
Positionsupercont1.338:1050087..1093176[GBrowse]
VectorBasehttp://www.vectorbase.org/search/site/AAEL008647
Gene Expressionhttps://www.vectorbase.org/expression-browser/gene/AAEL008647
sequence mRNA:
>AAEL008647-RA
GGTAAATATTGACCAATACACGCAGGGGACTTTTTGTTACACATGCAAACAGAAGTGAAAATCACGCATGTAGCAAGCGT
AACAGAAGGCTCCACGACTAACAAAAAATAAAACCTTTATACGATTCTATGGCATGAAAAATTCGCTCTTTCATTTCACC
AAATAATTAAATATGGAAAAACGCATTATAGGTAGAATATTGTCGATTTAGTAATCCAGTATTTCACGAGAACTCCGACT
GGACAGACACGAGCATGTTCGGTTCGAAATTCTGGATCCCTCTCGGTAGTTTTGGGAAAATGTGGTGAAACTAAATAGAT
TGTGGCCCAGCAGAGCACACAGCTCAGTGAAATAACACAAGTTTTGCAATAACTAGGAAGCCAAACCGATCTGAATAACA
GTGCTCGAGCTTACATCATACAAGGTGTTATACAAGCGGTGGAGTTCCTAGTAGTGCCTTGAAAATAACGGTTGTGAAAA
TGGATACGAATTATATTATCAAGTGACAAATAGAAGAAACCAAGATCCTGCAGAGGATTGTGATATTTGGAGCGCAACTC
GTGAAATAAAGAAGATTCGAATATCAATTGAGGAAGTGATCTCTACATAGGAGACCATTTGCAGTTTATGTTGTGGGGGA
AATTATAAAAAAGTGAAAAGGAGAAATACCACAAAATATAAAAAAGTCGCTCACGCAGAGAATCCATGAGATGGTGAAAT
GGTCCAAATCCGTGATGAACTATTTGAACTTTGGCTAACAAACGATCAAAAGCGATAAAAACCGCCCATCAATTGATGGG
AGTATGAGGTTATTATTAAGTTCAGAGCCAATAATACGTAAAAGAGGGTCAGAATAAGAGATAAAAAAAATCAAAATGCG
TAAGAGACAGAAGCTACTTCCGGGGATGTCCGACATCGCCGTTATAGTAATATTAGCTAGATTAGTGTTAGTATTAGGTC
AAACCACCTGCAACAATGGTCAGGGTCGGGTACTTTACGAAAGACTGCCAAATCAACAGTTGCAAGGCTTCGATGACGAC
GTGGTCCGAGATTCGGCGCCACCGTTCCGAGTGCTGGAGAAATGCCAAGACCTCTGCCTGCGAGACCGCACAGCGTCCAA
CAACTTGGGACGAGCTTGTACAAGCTTTGACTTCCAACCCGGAAGTAGGATAGCCTCCTTCAGCGGCAGCGCCGAATACG
AAGAATCCACTTGCTACCTTACAAGGGAGCAAGCCGCTCCGGAGGGTATAGGAAATCTCATGCTCGTGCCGAACAGTGTC
CATTTCACCGAAGTGTGTCTGTCTTCTAGTCGACCGGATCGCGAATGTCCCAGCCGGCGCTATGTGTTCGAAAGACACCC
GAGGAAGAAACTCAAACTGCCAGTGTCCGATATCAAGGAAGTGACTGCCGCCAATCGTTCGGATTGCGAGGACAAGTGCC
TCAATGAGTTTTCCTTCGTTTGCCGATCGGCAAACTACGATTCCACTTTGCGCAGTTGTTCCATGAGCCGATTCACCCGG
CGGACCCATCCGGAACTGCTGGAAGATGATCCGAACTCGGATTATTTGGAGAACACCTGTCTGAATGCGGAACGGCGCTG
CGATGGCTTGGTGGTGTACGTAAAAGAGGAGAACAAACGGCTGGGCGGTCCCTTCGAGGTGGAGATTTTCAACAACATGA
CCCTGGAGGAATGCCAGTCGCTCTGTCTGAGGGCTGAAAAGTATTTCTGCCGCTCGATCGAATTCGACGATCAAACGAAG
CAGTGCATCCTCTCGGAGGAAGATTCGGTCTCGCAGAAAGATGACCTCAGTATCAGCTCTAGTCCCACCCACCATTTCTA
CGACTTGGTGTGCCTGGATAATCAACGCGGAACCGATTATCCGGAAAATTCCGTTACATCACACTTGTTCGCTAGCGGCA
GACGTCCAGATACCGCCTTTCAGAGGTATCGTAACTCTAGACTAGGTGGAGAGTTTCATTCAGAAATTACGGGAAGGTCG
TTGAGTGAGTGTCTGGACGAGTGTCTCCGGCAGACCAGCTTCCAGTGCCGTTCAGCGGTCTATAGCGATCGCTTTCGAAC
CTGCCGTCTCAGTCGATACAATCAACGGGATGGAATGCGCATCATCTACGATGCTGACTATGATTACTATGAAAACCTAA
TGCTGGGCGGAGATTCCGATTCGACCAACGGCAGACCAGATCCGACAGATTGGAGACCACCCTACGGAGACCGTGATCGT
GATCGCATACCAGACGACAGAGCTCCAGGTCGGTTTCCACCGGGAGAACGTTATCCTCCTGGATTACGACCGGACTATGG
TGGTGGTTATCCATCAACAGACAGATATCCTGGACCAACGGATCGTTATCCAATGGGCCCGGGAACAGATCGTTATCCAG
CGGATTTCGATGGAAGATATCCACCGGTGTACGACAATCGGTTTCCAGGGGATCGCTACGGACCAACAGATCGGTATCCG
GATCGTGAACCCGACCTCTATCCTGGAATACCTCCCATGCGTTACCCTCCACCCGACTCAAGATATCCTCCAGACACAAG
ATACCCCCCAACTCCGGACACGCGCTATCCAACGGATTCGCGATATCCTCCTGACTCTAGGTATCCAGTTGATAATAGAT
ATCCTAAGGATCCGCGTTACCCCACAGACCCTCGATATCCCACTGATTCACGATATCCACCGCCCACTCCCGACTCAAGG
TATCCGCCAATGCGACCAGAAACTCGCTACCCTCTAGCACCGACTGGAACCCGTTATCCTCCACCATACATGCCACAGAT
GTATCCTAACTATCAGTCAGGTTATCCACCGCCACCTAGAACTCCTCCAGATCGTGGATTCACCACTGATCGCTACCCAC
CTCCCTTGAGACCAGTCGACAATAACCGTTACCCAGCACCCGATTCGCGATACCCCATGGAACCGATTCCGGCACAGGGT
CGTTACCCAACGTCACAACATCAGATCCCACTGCTTCCGCACAAATACAACGATGGTTATGATCCGTACGAACGTGGATA
CGGAGATAATCGTGGCTACGGTCCGTACTATCCACCATCGGGAGTGGGAAGAATACCACCCCCAATGCCACTGCCGGCAT
TCCCAGATCGAGACCGTGGCTACCGGCGTCCAGGAATGCCCGATGGAGGAGGTTATCCGTTTGAAATACCTTACGGGCCT
TCCAGTTCCGGATACGATAACACTCTCGGGGGTGGAGACGGTTTCGGAGGGTTCGGACCACAACGGCCGTATGAAACTCG
GTGCGATGGCTACGACAGCTTCAAACAGATGGCTTCCAAGCGCAAGATGCGGAAACAATTCATAAGGCGAGTAATCAATG
CACCATCGCTGGGAGTTTGTCAGCAGGAGTGTGTCGCAGCTAGAGATTTTATGTGCCGCAGCTTCAACTACAGGGAATCG
GCTCCCTATGAAACAGAAGGCAATTGCGAGTTGAGTGACCGGGATTCCAGAGATCTGGACATACCCAGCAGCCAGATGTT
TGAAACCGACAACTCAGATTACTACGAAAGATCAATGGGACGGGGTCAAGGGGATGAATGCTTGGATGTTGGCCAGCTGT
GTAACGAAGACGGTATGGAGTTCACTTTGAAGACACCGGAAGGATTTGTTGGAAGAATTTACGCATACGGTTTCTACGAC
CGTTGCTTCTTCCGAGGTAACGGTGGCACTGTAAACGTTCTTAGGATTAGCGGTCCTGGAGGATATCCAGAGTGTGGAAC
TCAAAGGTATGGAGACACAATGACCAACATCATCGTTGTTCAGTTCTCGGATAATGTTCAGACTGGCAGAGATAAGCGGT
TTAACTTGACCTGTATGTTCCGAGGACCTGGTGAAGCAGTTGTTACCTCAGGATATATTGGAGCAGGATCAGGCAGTCCG
ATCCCGATCGAGTATCTACCGGCAGAAAATTCGATGAGCAACAAAGTGCGGCTTATGATTCTGTACCAGGGACGACCTAC
GACAACCATTGCCGTTGGTGACCCGTTGACATTCCGCTTGGAATCTCAGGATGGATACAGCCATGCTACAGATATCTTTG
CAACAAATGTTGTAGCGCGGGATCCTTACTCTGGAAGAAGTGTTCAACTGATTGATAACTATGGCTGCCCAGTGGACAAT
TTGGTGTTCCCAGAACTTGGACGCTCAAGAGATAATGACGCTTTGGAAGCGAGATTCAACGCATTCAAAATTCCAGAGTC
CAACTTTTTAGTTTTCGAAGCAACGGTCCGAACTTGTCGAGGAGGCTGTCAACCGGCTTATTGTCCTGGGCCCAGTGGTC
GATCGGAACCGTCATTCGGAAGGCGAAGGAGATCTGTATCCGAAAACCCGACAGACTTCGATGGAACAGCTGAGCCGCTG
ACAAGCAGTAATACGGATGACGATGATGATGAGGTTTCGATAGTCAATGGAACAGTTATACGCGACACAAAGGTGCTAAA
GAATGGGACGAAGGATGGCGAGGACTCTACCGGAGATGATCTTGAAGCAAATGCAAGTGAAATGCCCGAGCAAGTGCGCG
AGATGATTGAGTCTCGCGCTTTTCACACTTTACAGGTTTTCCAATCCCGTGAAGAGATGCAACAGGACACGGTTGCCAGG
AAAATGGTTGCTCCACAAGAGACCGTCTGTTTGACACATTCGGAATACTACGGATTACTAAGTGCATTGATCCTGCTCAT
GATTCTTCTCATCAGCATAACGTTTGCCTCCGGGTTAGCTTATCGGAGGTATTGGAAAGTGTTCATGAAGAATCGGGCAC
TTGATCGAACGTCTCCGGTTAATTCTTTCACTCCGTCTGCATTGCATAACGTATCCGGAAGTCAATTCCATGCATCCGGC
AGAGGAACCTCGTCATCTCGAGGCGAAGGAAACATACGTTCACCAGGATTATCACTCTTTGGAAACGGACTACAGAAAAC
TTTTGCCACCGGGAACCTCTCCCGAATGTGTCAAATTCCTGTGATGAATCCAATTTCCAGGACCAACGGTAATAAAAGTG
AATTTGATGACCCCAGCGAACCGATCTACACTGACCCTTCCCTCTTTGAACGATCAAGGTAA
PEP:
>AAEL008647-PA
MRKRQKLLPGMSDIAVIVILARLVLVLGQTTCNNGQGRVLYERLPNQQLQGFDDDVVRDSAPPFRVLEKCQDLCLRDRTA
SNNLGRACTSFDFQPGSRIASFSGSAEYEESTCYLTREQAAPEGIGNLMLVPNSVHFTEVCLSSSRPDRECPSRRYVFER
HPRKKLKLPVSDIKEVTAANRSDCEDKCLNEFSFVCRSANYDSTLRSCSMSRFTRRTHPELLEDDPNSDYLENTCLNAER
RCDGLVVYVKEENKRLGGPFEVEIFNNMTLEECQSLCLRAEKYFCRSIEFDDQTKQCILSEEDSVSQKDDLSISSSPTHH
FYDLVCLDNQRGTDYPENSVTSHLFASGRRPDTAFQRYRNSRLGGEFHSEITGRSLSECLDECLRQTSFQCRSAVYSDRF
RTCRLSRYNQRDGMRIIYDADYDYYENLMLGGDSDSTNGRPDPTDWRPPYGDRDRDRIPDDRAPGRFPPGERYPPGLRPD
YGGGYPSTDRYPGPTDRYPMGPGTDRYPADFDGRYPPVYDNRFPGDRYGPTDRYPDREPDLYPGIPPMRYPPPDSRYPPD
TRYPPTPDTRYPTDSRYPPDSRYPVDNRYPKDPRYPTDPRYPTDSRYPPPTPDSRYPPMRPETRYPLAPTGTRYPPPYMP
QMYPNYQSGYPPPPRTPPDRGFTTDRYPPPLRPVDNNRYPAPDSRYPMEPIPAQGRYPTSQHQIPLLPHKYNDGYDPYER
GYGDNRGYGPYYPPSGVGRIPPPMPLPAFPDRDRGYRRPGMPDGGGYPFEIPYGPSSSGYDNTLGGGDGFGGFGPQRPYE
TRCDGYDSFKQMASKRKMRKQFIRRVINAPSLGVCQQECVAARDFMCRSFNYRESAPYETEGNCELSDRDSRDLDIPSSQ
MFETDNSDYYERSMGRGQGDECLDVGQLCNEDGMEFTLKTPEGFVGRIYAYGFYDRCFFRGNGGTVNVLRISGPGGYPEC
GTQRYGDTMTNIIVVQFSDNVQTGRDKRFNLTCMFRGPGEAVVTSGYIGAGSGSPIPIEYLPAENSMSNKVRLMILYQGR
PTTTIAVGDPLTFRLESQDGYSHATDIFATNVVARDPYSGRSVQLIDNYGCPVDNLVFPELGRSRDNDALEARFNAFKIP
ESNFLVFEATVRTCRGGCQPAYCPGPSGRSEPSFGRRRRSVSENPTDFDGTAEPLTSSNTDDDDDEVSIVNGTVIRDTKV
LKNGTKDGEDSTGDDLEANASEMPEQVREMIESRAFHTLQVFQSREEMQQDTVARKMVAPQETVCLTHSEYYGLLSALIL
LMILLISITFASGLAYRRYWKVFMKNRALDRTSPVNSFTPSALHNVSGSQFHASGRGTSSSRGEGNIRSPGLSLFGNGLQ
KTFATGNLSRMCQIPVMNPISRTNGNKSEFDDPSEPIYTDPSLFERSR
Swiss-ProtDNA-directed RNA polymerase II subunit RPB1
SUPERFAMILYSSF57414  Hairpin loop containing domain-like superfamily     
Gene3DG3DSA:3.50.4.10     
PfamPF00024  PAN_1; PAN domain     
SMARTSM00241     
ProSiteProfilesPS51034  ZP_2; ZP domain profile.     
PANTHERPTHR22963:SF27
OrthologiGroup-00584    Uncharacterized protein PFA0635c      

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